Pesquisa | BVS Violência e Saúde

1.

Identifying recent adaptations in large-scale genomic data.

Grossman, Sharon R; Andersen, Kristian G; Shlyakhter, Ilya; Tabrizi, Shervin; Winnicki, Sarah; Yen, Angela; Park, Daniel J; Griesemer, Dustin; Karlsson, Elinor K; Wong, Sunny H; Cabili, Moran; Adegbola, Richard A; Bamezai, Rameshwar N K; Hill, Adrian V S; Vannberg, Fredrik O; Rinn, John L; Lander, Eric S; Schaffner, Stephen F; Sabeti, Pardis C.

Cell ; 152(4): 703-13, 2013 Feb 14.

Artigo em Inglês | MEDLINE | ID: mdl-23415221

2.

A spontaneous complex structural variant in rcan-1 increases exploratory behavior and laboratory fitness of Caenorhabditis elegans.

Zhao, Yuehui; Long, Lijiang; Wan, Jason; Biliya, Shweta; Brady, Shannon C; Lee, Daehan; Ojemakinde, Akinade; Andersen, Erik C; Vannberg, Fredrik O; Lu, Hang; McGrath, Patrick T.

PLoS Genet ; 16(2): e1008606, 2020 02.

Artigo em Inglês | MEDLINE | ID: mdl-32092052

3.

Ribose-Map: a bioinformatics toolkit to map ribonucleotides embedded in genomic DNA.

Gombolay, Alli L; Vannberg, Fredrik O; Storici, Francesca.

Nucleic Acids Res ; 47(1): e5, 2019 01 10.

Artigo em Inglês | MEDLINE | ID: mdl-30272244

4.

Mapping-free variant calling using haplotype reconstruction from k-mer frequencies.

Audano, Peter A; Ravishankar, Shashidhar; Vannberg, Fredrik O.

Bioinformatics ; 34(10): 1659-1665, 2018 05 15.

Artigo em Inglês | MEDLINE | ID: mdl-29186321

5.

Molecular Epidemiology of Plasmodium falciparum kelch13 Mutations in Senegal Determined by Using Targeted Amplicon Deep Sequencing.

Talundzic, Eldin; Ndiaye, Yaye D; Deme, Awa B; Olsen, Christian; Patel, Dhruviben S; Biliya, Shweta; Daniels, Rachel; Vannberg, Fredrik O; Volkman, Sarah K; Udhayakumar, Venkatachalam; Ndiaye, Daouda.

Antimicrob Agents Chemother ; 61(3)2017 03.

Artigo em Inglês | MEDLINE | ID: mdl-28069653

6.

Whole-Genome Sequencing to Determine Origin of Multinational Outbreak of Sarocladium kiliense Bloodstream Infections.

Etienne, Kizee A; Roe, Chandler C; Smith, Rachel M; Vallabhaneni, Snigdha; Duarte, Carolina; Escadon, Patricia; Castaneda, Elizabeth; Gomez, Beatriz L; de Bedout, Catalina; López, Luisa F; Salas, Valentina; Hederra, Luz Maria; Fernandez, Jorge; Pidal, Paola; Hormazabel, Juan Carlos; Otaiza, Fernando; Vannberg, Fredrik O; Gillece, John; Lemmer, Darrin; Driebe, Elizabeth M; Englethaler, David M; Litvintseva, Anastasia P.

Emerg Infect Dis ; 22(3): 476-81, 2016 Mar.

Artigo em Inglês | MEDLINE | ID: mdl-26891230

7.

A Mal functional variant is associated with protection against invasive pneumococcal disease, bacteremia, malaria and tuberculosis.

Khor, Chiea C; Chapman, Stephen J; Vannberg, Fredrik O; Dunne, Aisling; Murphy, Caroline; Ling, Edmund Y; Frodsham, Angela J; Walley, Andrew J; Kyrieleis, Otto; Khan, Amir; Aucan, Christophe; Segal, Shelley; Moore, Catrin E; Knox, Kyle; Campbell, Sarah J; Lienhardt, Christian; Scott, Anthony; Aaby, Peter; Sow, Oumou Y; Grignani, Robert T; Sillah, Jackson; Sirugo, Giorgio; Peshu, Nobert; Williams, Thomas N; Maitland, Kathryn; Davies, Robert J O; Kwiatkowski, Dominic P; Day, Nicholas P; Yala, Djamel; Crook, Derrick W; Marsh, Kevin; Berkley, James A; O'Neill, Luke A J; Hill, Adrian V S.

Nat Genet ; 39(4): 523-8, 2007 Apr.

Artigo em Inglês | MEDLINE | ID: mdl-17322885

8.

Human genetic susceptibility to intracellular pathogens.

Vannberg, Fredrik O; Chapman, Stephen J; Hill, Adrian V S.

Immunol Rev ; 240(1): 105-16, 2011 Mar.

Artigo em Inglês | MEDLINE | ID: mdl-21349089

9.

CISH and susceptibility to infectious diseases.

Khor, Chiea C; Vannberg, Fredrik O; Chapman, Stephen J; Guo, Haiyan; Wong, Sunny H; Walley, Andrew J; Vukcevic, Damjan; Rautanen, Anna; Mills, Tara C; Chang, Kwok-Chiu; Kam, Kai-Man; Crampin, Amelia C; Ngwira, Bagrey; Leung, Chi-Chiu; Tam, Cheuk-Ming; Chan, Chiu-Yeung; Sung, Joseph J Y; Yew, Wing-Wai; Toh, Kai-Yee; Tay, Stacey K H; Kwiatkowski, Dominic; Lienhardt, Christian; Hien, Tran-Tinh; Day, Nicholas P; Peshu, Nobert; Marsh, Kevin; Maitland, Kathryn; Scott, J Anthony; Williams, Thomas N; Berkley, James A; Floyd, Sian; Tang, Nelson L S; Fine, Paul E M; Goh, Denise L M; Hill, Adrian V S.

N Engl J Med ; 362(22): 2092-101, 2010 Jun 03.

Artigo em Inglês | MEDLINE | ID: mdl-20484391

10.

A common haplotype of the TNF receptor 2 gene modulates endotoxin tolerance.

Fairfax, Benjamin P; Davenport, Emma E; Makino, Seiko; Hill, Adrian V S; Vannberg, Fredrik O; Knight, Julian C.

J Immunol ; 186(5): 3058-65, 2011 Mar 01.

Artigo em Inglês | MEDLINE | ID: mdl-21282507

11.

An integrated expression phenotype mapping approach defines common variants in LEP, ALOX15 and CAPNS1 associated with induction of IL-6.

Fairfax, Benjamin P; Vannberg, Fredrik O; Radhakrishnan, Jayachandran; Hakonarson, Hakon; Keating, Brendan J; Hill, Adrian V S; Knight, Julian C.

Hum Mol Genet ; 19(4): 720-30, 2010 Feb 15.

Artigo em Inglês | MEDLINE | ID: mdl-19942621

12.

PTX3 genetic variation and dizygotic twinning in the Gambia: could pleiotropy with innate immunity explain common dizygotic twinning in Africa?

Sirugo, Giorgio; Edwards, Digna R Velez; Ryckman, Kelli K; Bisseye, Cyrille; White, Marquitta J; Kebbeh, Bunja; Morris, Gerard A J; Adegbola, Richard A; Tacconelli, Alessandra; Predazzi, Irene M; Novelli, Giuseppe; Vannberg, Fredrik O; Odunsi, Kunle; Page, Grier P; Williams, Scott M.

Ann Hum Genet ; 76(6): 454-63, 2012 Nov.

Artigo em Inglês | MEDLINE | ID: mdl-22834944

13.

Leprosy and the adaptation of human toll-like receptor 1.

Wong, Sunny H; Gochhait, Sailesh; Malhotra, Dheeraj; Pettersson, Fredrik H; Teo, Yik Y; Khor, Chiea C; Rautanen, Anna; Chapman, Stephen J; Mills, Tara C; Srivastava, Amit; Rudko, Aleksey; Freidin, Maxim B; Puzyrev, Valery P; Ali, Shafat; Aggarwal, Shweta; Chopra, Rupali; Reddy, Belum S N; Garg, Vijay K; Roy, Suchismita; Meisner, Sarah; Hazra, Sunil K; Saha, Bibhuti; Floyd, Sian; Keating, Brendan J; Kim, Cecilia; Fairfax, Benjamin P; Knight, Julian C; Hill, Philip C; Adegbola, Richard A; Hakonarson, Hakon; Fine, Paul E M; Pitchappan, Ramasamy M; Bamezai, Rameshwar N K; Hill, Adrian V S; Vannberg, Fredrik O.

PLoS Pathog ; 6: e1000979, 2010 Jul 01.

Artigo em Inglês | MEDLINE | ID: mdl-20617178

14.

Effect of HIV-2 infection on HIV-1 disease progression.

Vannberg, Fredrik O; McDermid, Joann M; Jaye, Assan.

N Engl J Med ; 367(20): 1962; author reply 1962-3, 2012 11 15.

Artigo em Inglês | MEDLINE | ID: mdl-23150975

15.

Mannose-binding lectin genotypes: lack of association with susceptibility to thoracic empyema.

Chapman, Stephen J; Vannberg, Fredrik O; Khor, Chiea C; Rautanen, Anna; Maskell, Nicholas A; Davies, Christopher W H; Moore, Catrin E; Day, Nicholas P; Crook, Derrick W; Davies, Robert J O; Hill, Adrian V S.

BMC Med Genet ; 11: 5, 2010 Jan 15.

Artigo em Inglês | MEDLINE | ID: mdl-20078874

16.

Common NFKBIL2 polymorphisms and susceptibility to pneumococcal disease: a genetic association study.

Chapman, Stephen J; Khor, Chiea C; Vannberg, Fredrik O; Rautanen, Anna; Walley, Andrew; Segal, Shelley; Moore, Catrin E; Davies, Robert J O; Day, Nicholas P; Peshu, Norbert; Crook, Derrick W; Berkley, James A; Williams, Thomas N; Scott, J Anthony; Hill, Adrian V S.

Crit Care ; 14(6): R227, 2010.

Artigo em Inglês | MEDLINE | ID: mdl-21171993

17.

PTPN22 and invasive bacterial disease.

Chapman, Stephen J; Khor, Chiea C; Vannberg, Fredrik O; Maskell, Nicholas A; Davies, Christopher W H; Hedley, Emma L; Segal, Shelley; Moore, Catrin E; Knox, Kyle; Day, Nicholas P; Gillespie, Stephen H; Crook, Derrick W; Davies, Robert J O; Hill, Adrian V S.

Nat Genet ; 38(5): 499-500, 2006 May.

Artigo em Inglês | MEDLINE | ID: mdl-16642008

18.

Ribonucleotide incorporation in yeast genomic DNA shows preference for cytosine and guanosine preceded by deoxyadenosine.

Balachander, Sathya; Gombolay, Alli L; Yang, Taehwan; Xu, Penghao; Newnam, Gary; Keskin, Havva; El-Sayed, Waleed M M; Bryksin, Anton V; Tao, Sijia; Bowen, Nicole E; Schinazi, Raymond F; Kim, Baek; Koh, Kyung Duk; Vannberg, Fredrik O; Storici, Francesca.

Nat Commun ; 11(1): 2447, 2020 05 15.

Artigo em Inglês | MEDLINE | ID: mdl-32415081

19.

Genomewide association study of leprosy.

Wong, Sunny H; Hill, Adrian V S; Vannberg, Fredrik O.

N Engl J Med ; 362(15): 1446-7; author reply 1447-8, 2010 Apr 15.

Artigo em Inglês | MEDLINE | ID: mdl-20393182

20.

Functional polymorphisms in the FCN2 gene are not associated with invasive pneumococcal disease.

Chapman, Stephen J; Vannberg, Fredrik O; Khor, Chiea C; Segal, Shelley; Moore, Catrin E; Knox, Kyle; Day, Nicholas P; Davies, Robert J O; Crook, Derrick W; Hill, Adrian V S.

Mol Immunol ; 44(12): 3267-70, 2007 May.

Artigo em Inglês | MEDLINE | ID: mdl-17382393

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