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1.
Anal Chem ; 92(2): 1811-1817, 2020 01 21.
Artigo em Inglês | MEDLINE | ID: mdl-31804064

RESUMO

Herein a rigid three-dimensional (3D) DNA "nanosafe-box" (DNB) for encapsulation and release of a recognition probe (N3) is designed to construct an electrochemical biosensor with the use of electroactive two-dimensional metal-organic framework (2D MOF) nanosheets as signal tags for ultrasensitive detection of mercury ion (Hg2+). Initially, N3 is locked in the 3D cavity of DNB by blocker DNA. After addition of target Hg2+, exonuclease III (Exo-III) digestion is initiated to the liberate DNA "key" (K); thereby, the free K triggers a strand displacement reaction for exposing the prelocked N3 to successfully ligate dibenzocyclooctyne (DBCO)-tagged anchor via metal-catalyst-free click chemistry, in which amounts of 2D MOF nanosheets containing Co(II) as electron mediator are introduced accompanied by significant electrochemical response. Compared with traditional linear or stem-loop DNA nanostructure, the well-designed 3D DNB possesses remarkably enhanced mechanical rigidity and structural stability, resulting in improved accessibility of probes and increased loading amounts of signal tags. More importantly, by this way of encapsulation and release of recognition probes, the background signal is decreased dramatically, leading to increased sensitivity of the proposed biosensor. Consequently, this electrochemical biosensor exhibits outstanding analytical performance for Hg2+ detection with a low detection limit of 33 fM and dynamic linear range of 0.1 pM to 10 nM. This strategy offers an ingenious method for detection of metal ions and biomarkers, possessing potential applications in environmental tests and clinical diagnosis.


Assuntos
Azidas/química , Técnicas Biossensoriais/métodos , Sondas de DNA/química , DNA/química , Técnicas Eletroquímicas/métodos , Mercúrio/análise , Ciclo-Octanos/química , Exodesoxirribonucleases/química , Ouro/química , Limite de Detecção , Nanopartículas Metálicas/química , Estruturas Metalorgânicas/química , Conformação de Ácido Nucleico , Reprodutibilidade dos Testes
2.
Analyst ; 145(3): 946-952, 2020 Feb 03.
Artigo em Inglês | MEDLINE | ID: mdl-31825415

RESUMO

In this work, an electroanalytical platform for nereistoxin (NRT)-related insecticide detection is proposed on the basis of NRT induced DNA conformational switching and exonuclease III (Exo III) assisted target recycling. NRT-related insecticides were first hydrolyzed and converted into NRT with two thiol groups (-SH). Then, a cytosine-Ag+-cytosine (C-Ag+-C) mismatched base pair was adopted to induce a blunt-ended hairpin configuration of HP DNA. In the presence of converted NRT, it could take up Ag+ from HP DNA to change its conformation from a hairpin to single-stranded structure (HP ssDNA). Thereafter, the obtained HP ssDNA was further hybridized with an H1 hairpin probe on the electrode surface to trigger the Exo III cleavage process, releasing HP ssDNA for recycling leaving the G-quadruplex fragment of H1, which was used for hemin/G-quadruplex complex formation. The reversible redox reaction of Fe(iii)/Fe(ii) of hemin gave a remarkable electrochemical response for quantitative determination of the NRT-related insecticides. As an analytical model, a low detection limit of 3.9 ng L-1 and a wide linear range of 0.01-1500 µg L-1 with excellent selectivity were achieved for cartap detection. The proposed method also displayed great applicability for cartap detection in agricultural products.


Assuntos
Técnicas Biossensoriais/métodos , DNA de Cadeia Simples/química , Exodesoxirribonucleases/metabolismo , Inseticidas/análise , Toxinas Marinhas/análise , Pareamento Incorreto de Bases , Citosina/química , Técnicas Eletroquímicas , Compostos Férricos/química , Quadruplex G , Limite de Detecção , Nanopartículas Metálicas/química , Conformação de Ácido Nucleico , Hibridização de Ácido Nucleico , Oxirredução , Reprodutibilidade dos Testes , Prata/química
3.
Anal Chem ; 90(19): 11439-11445, 2018 10 02.
Artigo em Inglês | MEDLINE | ID: mdl-30175577

RESUMO

Herein, for the first time, we engineered click chemistry reaction to trigger a 3D DNA walking machine for ultrasensitive electrochemical detection of copper ion (Cu2+), which provided a convenient access to overcome the shortcomings of poor selectivity and limited amplification efficiency in traditional determination of Cu2+. Click chemistry reaction drove azido-S2 to bind with alkynyl-S1 for the formation of a walker probe on aminated magnetic polystyrene microsphere@gold nanoparticles (PSC@Au), which opened the hairpin-locked DNAzyme. In the presence of magnesium ion (Mg2+), the unlocked DNAzyme was activated to cleave the self-strand at the facing ribonucleotide site, accompanied by the release of product DNA (S3) and the walker probe. Therefore, the walker probe was able to open the adjacent hairpin-locked DNAzyme strand and then be released by DNAzyme cleavage along the PSC@Au-DNAzyme track. Eventually, the liberated single-strand S3 induced catalytic hairpin assembly (CHA) recycling, resulting in the capture of a large number of methylene blue-tagged hairpin DNA (MB-H2) on the sensor surface and significant electrochemical responses. By coupling click chemistry reaction with the dual-amplification strategy of the 3D DNA walking machine and CHA recycling, the proposed biosensor not only demonstrated high accuracy and selectivity for Cu2+ detection in real samples but also showed excellent performance for Cu2+ detection with a wide linear range of 1.0 pM to 500 nM and low detection limit of 0.33 pM. Moreover, this elaborated biosensor could be readily expanded to Mg2+ detection with a constant concentration of Cu2+, which paves a new way to apply the 3D DNA walking machine in various ion sensings.


Assuntos
Cobre/análise , DNA/química , Técnicas Eletroquímicas/métodos , Íons/química , Técnicas Biossensoriais , Catálise , Química Click , DNA/metabolismo , DNA Catalítico/metabolismo , Ouro/química , Limite de Detecção , Magnésio/análise , Nanopartículas Metálicas/química , Poliestirenos/química
4.
Analyst ; 142(24): 4708-4714, 2017 Dec 04.
Artigo em Inglês | MEDLINE | ID: mdl-29168849

RESUMO

An electrochemical sensing system based on a highly effective mercuric ion (Hg2+) converting strategy and rolling circle amplification (RCA) is developed for the ultrasensitive detection of Hg2+. The Hg2+ converting strategy is implemented based on Hg2+ specific recognition thymine-Hg2+-thymine (T-Hg2+-T)-induced DNA strand displacement. First, polystyrene magnetic microspheres coated by AuNPs (Au@PSC) as a magnetic separator were labeled with ssDNA D1 (thymine-rich) and S1/D2 DNA duplex (guanine-rich S1). In the presence of Hg2+ and long ssDNA D3 (thymine-rich at the 5' end), the formation of a stable T-Hg2+-T structure between D2 and D3 pushes S1 out from the S1/D2 DNA duplex, realizing the conversion of input target Hg2+ into output S1. Thus, the total amount of output S1 is proportional to the amount of input Hg2+. Thereafter, the output S1 serves as the primer to perform RCA to obtain long guanine-rich ssDNA, which could be further hybridized with the capture DNA on the electrode surface. Subsequently, methylene blue (MB) as an electron mediator interacts with the ssDNA polymers via electrostatic binding to produce a detection signal. The electrochemical biosensor exhibits a wide linear range of 1 pM to 1 µM with a low detection limit of 0.684 pM. Importantly, this sensor can be successfully applied in water samples with good accuracy and excellent recovery, which indicates its potential for Hg2+ detection in the environment.


Assuntos
Técnicas Biossensoriais , Técnicas Eletroquímicas , Mercúrio/análise , DNA de Cadeia Simples/química , Limite de Detecção , Timina/química
5.
Anal Chem ; 88(10): 5218-24, 2016 05 17.
Artigo em Inglês | MEDLINE | ID: mdl-27087505

RESUMO

The preparation of self-assembled DNA nanostructure with different sizes and shapes has been one of the most promising research areas in recent years, while the application of these DNA nanostructures in biosensors is far from fully developed. Here, we presented a novel carrier system to construct an electrochemiluminescence (ECL) aptasensor for ultrasensitive determination of lipopolysaccharides (LPS) on the basis of self-assembled tetrahedron DNA dendrimers. Doxorubicin (Dox), a well-known intercalator of double stranded DNA (dsDNA), was conjugated with the ECL luminophore of N-(aminobutyl)-N-(ethylisoluminol) (ABEI) to form a new type of ECL indicators (Dox-ABEI), which could noncovalently attach to dsDNA through intercalation. Based on this property, self-assembled tetrahedron DNA dendrimers were employed as an efficient nanocarrier to achieve a high loading efficiency for Dox-ABEI with significantly amplified ECL signal output. Streptavidin (SA) and biotin, a typical ligand-receptor pair, has been chosen to anchor the tetrahedron DNA dendrimers on the electrode surface. Moreover, by converting LPS content into DNA output, catalyzed hairpin assembly (CHA) target recycling signal amplification strategy was also adopted to enhance the sensitivity of the ECL aptasensor. With combining the loading power of the tetrahedron DNA dendrimers for ECL indicators, the inherent high sensitivity of ECL technique and target recycling for signal amplification, the proposed strategy showed a detection limit of 0.18 fg/mL for LPS.


Assuntos
Técnicas Biossensoriais/métodos , Lipopolissacarídeos/sangue , Medições Luminescentes/métodos , Biotina/química , DNA/química , Dendrímeros/química , Doxorrubicina/química , Portadores de Fármacos/química , Óxido Ferroso-Férrico/química , Ouro/química , Humanos , Peróxido de Hidrogênio/química , Indicadores e Reagentes , Limite de Detecção , Luminol/análogos & derivados , Luminol/química , Nanopartículas Metálicas/química , Técnicas de Amplificação de Ácido Nucleico/métodos , Estreptavidina/química
6.
Anal Chem ; 87(20): 10268-74, 2015 Oct 20.
Artigo em Inglês | MEDLINE | ID: mdl-26412581

RESUMO

Traditionally, amplified DNA detection in a loop-mediated isothermal amplification (LAMP) was carried out in a complicated gel electrophoresis or with expensive fluorescence-based methods. Here, instead of direct detection that relies on amplified DNA, the indirect detection based on tracing phosphate ions (Pi) generated during LAMP by using an electrochemical method has been proposed for sensitive nucleic acid detection. Pyrophosphate (PPi) as the byproduct of nucleic acid polymerization reaction in LAMP was hydrolyzed into Pi by the preaddition of thermostable inorganic pyrophosphatase (PPase). Thus, the total amount of Pi in the LAMP-amplified sample was proportional to the amount of starting DNA templates. The obtained Pi could then react with acidic molybdate to form the molybdophosphate precipitates on the electrode surface, which serve as redox mediators to give a readily measurable electrochemical signal. The practicality of this strategy has been further demonstrated by employing it for sensitive and accurate quantification of Nosema bombycis genomic DNA PTP1. The electrochemical method allowed the quantitative analysis for target genomic DNA with a detection limit of 17 fg/µL. Thus, we suppose that the novel method proposed in this work with superior sensitivity and specificity, as well as the simple feature, can be easily established for quantitative analysis of many other kinds of nucleic acids in the assistance of LAMP.


Assuntos
DNA Fúngico/análise , DNA Fúngico/genética , Técnicas Eletroquímicas , Nosema/genética , Técnicas de Amplificação de Ácido Nucleico , Fosfatos/análise , Temperatura , Íons/análise
7.
Analyst ; 139(17): 4264-9, 2014 Sep 07.
Artigo em Inglês | MEDLINE | ID: mdl-24971937

RESUMO

In the present work, we constructed a new label-free "inter-sandwich" electrochemical aptasensor for thrombin (TB) detection by employing a cleavage-based hybridization chain reaction (HCR). The designed single-stranded DNA (defined as binding DNA), which contained the thrombin aptamer binding sequence, a DNAzyme cleavage site and a signal reporter sequence, was first immobilized on the electrode. In the absence of a target TB, the designed DNAzymes could combine with the thrombin aptamer binding sequence via complementary base pairing, and then Cu(2+) could cleave the binding DNA. In the presence of a target TB, TB could combine with the thrombin aptamer binding sequence to predominantly form an aptamer-protein complex, which blocked the DNAzyme cleavage site and prevented the binding DNA from being cleaved by Cu(2+)-dependent DNAzyme. As a result, the signal reporter sequence could leave the electrode surface to trigger HCR with the help of two auxiliary DNA single-strands, A1 and A2. Then, the electron mediator hexaammineruthenium (III) chloride ([Ru(NH3)6](3+)) was embedded into the double-stranded DNA (dsDNA) to produce a strong electrochemical signal for the quantitative measurement of TB. For further amplification of the electrochemical signal, graphene reduced by dopamine (PDA-rGO) was introduced as a platform in this work. With this strategy, the aptasensor displayed a wide linearity in the range of 0.0001 nM to 50 nM with a low detection limit of 0.05 pM. Moreover, the resulting aptasensor exhibited good specificity and acceptable reproducibility and stability. Because of these factors, the fabrication protocol proposed in this work may be extended to clinical application.


Assuntos
Aptâmeros de Nucleotídeos/metabolismo , DNA Catalítico/metabolismo , Técnicas Eletroquímicas/métodos , Trombina/análise , Aptâmeros de Nucleotídeos/química , Cobre/metabolismo , DNA de Cadeia Simples/química , DNA de Cadeia Simples/metabolismo , Ouro/química , Humanos , Limite de Detecção , Nanopartículas Metálicas/química , Nanopartículas Metálicas/ultraestrutura , Nanocompostos/química , Nanocompostos/ultraestrutura , Hibridização de Ácido Nucleico , Reprodutibilidade dos Testes , Trombina/metabolismo
8.
Anal Methods ; 16(3): 396-402, 2024 01 18.
Artigo em Inglês | MEDLINE | ID: mdl-38131415

RESUMO

An electrochemical aptasensor for detecting lipopolysaccharides (LPS) was fabricated based on DNA-templated copper nanoparticles (DNA-CuNPs) and RecJf exonuclease-assisted target recycling. The DNA-CuNPs were synthesized on a double-stranded DNA template generated through the hybridization of the LPS aptamer and its complementary chain (cDNA). In the absence of LPS, the CuNPs were synthesized on DNA double-strands, and a strong readout corresponding to the CuNPs was achieved at 0.10 V (vs. SCE). In the presence of LPS, the fabricated aptamer could detach from the DNA double-strand to form a complex with LPS, disrupting the template for the synthesis of CuNPs on the electrode. Meanwhile, RecJf exonuclease could hydrolyze the cDNA together with this single-stranded aptamer, releasing the LPS for the next round of aptamer binding, thereby enabling target recycling amplification. As a result, the electrochemical signal decreased and could be used to indicate the LPS content. The fabricated electrochemical aptasensor exhibited an extensive dynamic working range of 0.01 pg mL-1 to 100 ng mL-1, and its detection limit was 6.8 fg mL-1. The aptasensor also exhibited high selectivity and excellent reproducibility. Moreover, the proposed aptasensor could be used in practical applications for the detection of LPS in human serum samples.


Assuntos
Aptâmeros de Nucleotídeos , Técnicas Biossensoriais , Nanopartículas Metálicas , Humanos , Exonucleases/química , Exonucleases/metabolismo , Lipopolissacarídeos , Cobre/química , DNA Complementar , Reprodutibilidade dos Testes , Aptâmeros de Nucleotídeos/química , Aptâmeros de Nucleotídeos/metabolismo , Técnicas Eletroquímicas , DNA/química , Nanopartículas Metálicas/química
9.
Analyst ; 138(22): 6938-45, 2013 Nov 21.
Artigo em Inglês | MEDLINE | ID: mdl-24081001

RESUMO

In this work, we demonstrated a novel sensitive sandwich-type pseudobienzyme aptasensor for thrombin detection. Greatly amplified sensitivity was based on mesoporous silica-multiwalled carbon nanotube (mSiO2@MWCNT) nanocomposites as enhanced materials and a pseudobienzyme electrocatalytic system. Firstly, the mSiO2@MWCNT nanocomposites not only have good biocompatibility and a suitable microenvironment for stabilizing the aptamer assembly, but also can load large amounts of electron mediator thionine (Thi), platinum nanoparticles (PtNPs) and hemin/G-quadruplex bioelectrocatalytic complex. Moreover, in the presence of H2O2 in an electrolytic cell, the synergistic reaction of PtNPs and hemin/G-quadruplex bioelectrocatalyzed the reduction of H2O2, dramatically amplifying the response signals of electron mediator Thi and improving the sensitivity. Secondly, dendrimer functionalized reduced graphene oxide (PAMAM-rGO) as the biosensor platform enhanced the surface area for the immobilization of abundant primary aptamers as well as facilitated electron transfer from Thi to the electrode, thus amplifying the detection response. Using the above multiple effects, the approach showed a high sensitivity and a wider linearity for the detection of thrombin in the range between 0.0001 nM and 80 nM with a detection limit of 50 fM. This new design avoided the fussy labeling process and the spatial distribution of each sequentially acting enzyme, which provided an ideal candidate for the development of a sensitive and simple bioanalytical platform.


Assuntos
Aptâmeros de Nucleotídeos/química , Técnicas Biossensoriais/instrumentação , DNA Catalítico/química , Nanotubos de Carbono/química , Dióxido de Silício/química , Trombina/análise , Limite de Detecção , Microscopia Eletrônica de Varredura , Porosidade , Reprodutibilidade dos Testes
10.
Analyst ; 138(21): 6595-9, 2013 Nov 07.
Artigo em Inglês | MEDLINE | ID: mdl-24003439

RESUMO

In this work, we reported a new label-free electrochemical aptasensor for highly sensitive detection of thrombin using direct electron transfer of glucose oxidase (GOD) as a redox probe and a gold nanoparticle-polyaniline-graphene (Au-PANI-Gra) hybrid for amplification. The Au-PANI-Gra hybrid with large surface area provided a biocompatible sensing platform for the immobilization of GOD. GOD was encapsulated into the three-dimensional netlike (3-mercaptopropyl)trimethoxysilane (MPTS) to form the MPTS-GOD biocomposite, which not only retained the native functions and properties, but also exhibited tunable porosity, high thermal stability, and chemical inertness. With abundant thiol tail groups on MPTS, MPTS-GOD was able to chemisorb onto the surface of the Au-PANI-Gra modified electrode through the strong affinity of the Au-S bond. The electrochemical signal originated from GOD, avoiding the addition or labeling of other redox mediators. After immobilizing the thiolated thrombin binding aptamer through gold nanoparticles (AuNPs), GOD as a blocking reagent was employed to block the remaining active sites of the AuNPs and avoid the nonspecific adsorption. The proposed method avoided the labeling process of redox probes and increased the amount of electroactive GOD. The concentration of thrombin was monitored based on the decrease of current response through cyclic voltammetry (CV) in 0.1 M PBS (pH 7.4). With the excellent direct electron transfer of double layer GOD membranes, the resulting aptasensor exhibited high sensitivity for detection of thrombin with a wide linear range from 1.0 × 10(-12) to 3.0 × 10(-8) M. The proposed aptasensor also showed good stability, satisfactory reproducibility and high specificity, which provided a promising strategy for electrochemical aptamer-based detection of other biomolecules.


Assuntos
Técnicas Biossensoriais/métodos , Técnicas Eletroquímicas/métodos , Glucose Oxidase/química , Grafite/química , Trombina/análise , Humanos
11.
Analyst ; 138(16): 4558-64, 2013 Aug 21.
Artigo em Inglês | MEDLINE | ID: mdl-23741737

RESUMO

In this work, a novel signal amplification electrochemical aptasensor for the sensitive and selective detection of thrombin was successfully fabricated. The amplification method was based on the hybridization chain reaction (HCR) and a pseudobienzyme electrocatalytic system. HCR-based double-stranded DNA (dsDNA) polymers not only constructed an effective carrier for anchoring larger amounts of electron mediator methylene blue (MB) into the DNA duplexes to produce a strong differential pulse voltammetry (DPV) signal, but also resulted in the formation of hemin/G-quadruplex DNAzymes nanowires by intercalating hemin into two induced single-stranded DNA (ssDNA). With the addition of NADH into the electrolytic cell, the hemin/G-quadruplex acting as an NADH oxidase and HRP-mimicking DNAzyme for the pseudobienzyme amplifying system could in situ biocatalyze the formation of H2O2 with local concentrations and low transfer loss resulting in dramatic signal enhancements. The binding event can be detected by a decrease in the integrated charge of MB which electrostatically absorbed onto dsDNA polymers. In the presence of thrombin, the dsDNA polymers associated with MB and hemin/G-quadruplex structures were removed from the electrode surface, leading to a significant decrease of redox current. DPV signals of MB provided quantitative measures of the concentrations of thrombin, with a linear calibration range of 0.01-50 nM and a detection limit of 2 pM. Moreover, the resulting aptasensor also exhibited good specificity, acceptable reproducibility and stability, indicating that the present strategy was promising for broad potential application in clinic assay and various protein analyses.


Assuntos
Técnicas Biossensoriais/métodos , DNA Catalítico/análise , Técnicas Eletroquímicas/métodos , Quadruplex G , Hemina/análise , Trombina/análise , Aptâmeros de Nucleotídeos/análise , Humanos , Hibridização de Ácido Nucleico
12.
RSC Adv ; 13(38): 26650-26662, 2023 Sep 04.
Artigo em Inglês | MEDLINE | ID: mdl-37681047

RESUMO

This paper focuses on the latest research printing technology and broad application for flexible liquid metal (LM) materials. Through the newest template printing method, centrifugal force assisted method, pen lithography technology, and laser method, the precision of liquid metal printing on the devices was improved to 10 nm. The development of novel liquid metal inks, such as PVA-LM ink and ethanol/PDMS/LM double emulsion ink, have further enhanced the recovery, rapid printing, high conductivity, and strain resistance. At the same time, liquid metals also show promise in the application of biochemical sensors, photocatalysts, composite materials, driving machines, and electrode materials. Liquid metals have been applied to biomedical, pressure/gas, and electrochemical sensors. The sensitivity, biostability, and electrochemical performance of these LM sensors were improved rapidly. They could continue to be used in healthy respiratory, heartbeat monitoring, and dopamine detection. Meanwhile, the applications of liquid metal droplets in catalytic-assisted MoS2 deposition, catalytic growth of two-dimensional (2D) lamellar, catalytic free radical polymerization, catalytic hydrogen absorption/dehydrogenation, photo/electrocatalysis, and other fields were also summarized. Through improving liquid metal composites, magnetic, thermal, electrical, and tensile enhancement alloys, and shape memory alloys with excellent properties could also be prepared. Finally, the applications of liquid metal in micro-motors, intelligent robot feet, nanorobots, self-actuation, and electrode materials were also summarized. This paper comprehensively summarizes the practical application of liquid metals in different fields, which helps understand LMs development trends, and lays a foundation for subsequent research.

13.
Anal Chim Acta ; 1236: 340590, 2022 Dec 15.
Artigo em Inglês | MEDLINE | ID: mdl-36396241

RESUMO

In this work, iron-based metal organic frameworks (Fe-MOF) are used as a self-sacrifice beacon to produce Prussian blue (PB). Then, a dual-mode electrochemical-colorimetric biosensing platform for kanamycin (KAN) detection is established considering the prominent redox activity and blue color of PB. CoFe2O4 magnetic nanobeads (CoFe2O4 MBs) are employed for immobilization and separation of the signal beacon in the complex matrix, and the combination between CoFe2O4 MBs and magnetic electrodes simplifies the electrochemical testing process. The linear range of the electrochemical mode is 0.1 nM-1.0 µM with a detection limit of 39 pM, and that of the colorimetric mode is 10 nM-2.0 µM with a detection limit of 3.6 nM. Furthermore, the dual-mode strategy shows satisfactory specificity and enhanced applicability for KAN detection in real samples. Compared with known dual-mode determination methods, the proposed design employs the same reaction to produce two signal output modes, thus eliminating the effect of different reactive pathways on the outcome and in turn promoting greater accuracy.


Assuntos
Técnicas Biossensoriais , Colorimetria , Canamicina , Técnicas Eletroquímicas/métodos , Ouro , Técnicas Biossensoriais/métodos , Fenômenos Magnéticos
14.
Biosens Bioelectron ; 102: 518-524, 2018 Apr 15.
Artigo em Inglês | MEDLINE | ID: mdl-29202437

RESUMO

Traditionally, genomic DNA detection is relay on a rigorous DNA amplification process, which always accompanied with complicated gel electrophoresis or expensive fluorescence detection methods. In this work, we have translated genomic DNA detection into adenosine triphosphate (ATP) test based on a split aptamer-based electrochemical sandwich assay. The key characteristic of our method are list as follows: first, nucleic acid amplification of the target gene was performed by the use of a loop mediated isothermal amplification (LAMP) process. The pyrophosphate (PPi), which released as the byproduct during the LAMP reaction, were further converted into ATP in the presence of adenosine 5'-phosphosulfate (APS) and ATP sulfurylase. Thereafter, the converted ATP was detected by constructing an electrochemical sandwich aptasensor. With such design, the conversion from the difficult detecting target (genomic DNA) into a convenient measured object (ATP) has been achieved. This proposed strategy was highly sensitive for Nosema bombycis genomic DNA PTP1 detection with a detection limit as low as 0.47 fg/µL and a linear range from 0.001pg/µL to 50ng/µL. And we supposed that this novel target conversion electroanalytical strategy established a universal approach for quantitative analysis of any other kinds of nucleic acid in assistance of nucleic acid polymerization reaction.


Assuntos
Técnicas Biossensoriais , DNA/isolamento & purificação , Nosema/isolamento & purificação , Trifosfato de Adenosina/química , Aptâmeros de Nucleotídeos/química , DNA/genética , Difosfatos/química , Técnicas Eletroquímicas , Fluorescência , Genômica , Limite de Detecção , Nosema/genética , Sulfato Adenililtransferase/química
15.
Anal Chim Acta ; 1023: 22-28, 2018 Sep 06.
Artigo em Inglês | MEDLINE | ID: mdl-29754603

RESUMO

In this work, a highly sensitive impedimetric biosensor was developed for mercuric ion (Hg2+) detection. The biosensor design was based on Hg2+-triggered exonuclease III (Exo III) cleavage for target recycling and DNAzyme-mediated catalytic for precipitation polymerization. Hg2+ induced thymine-thymine (T-T) mismatches were used to trigger the Exo III-catalyzed target recycling and produce free single-stranded DNA (defined as M). The outputted M then assisted the in formation of a DNA network on electrode surface to efficiently immobilize the porphyrin manganese (MnTmPyP). The formed MnTMPyP-double-stranded DNA (MnTmPyP-dsDNA) complex exhibited peroxidase-like activity capable of catalyzing a 3,3-diaminobenzidine (DAB) oxidation reaction, which produced an insoluble precipitate on the electrode surface. This reaction significantly enhanced the resistance signal for the quantitative determination of Hg2+. Under optimal conditions, the impedimetric biosensor exhibited a wide dynamic working range of 0.005 nM-100 nM with a detection limit of 1.47 pM. This platform also demonstrated good reproducibility and selectivity, offering a promising avenue for the detection of other molecules.


Assuntos
Técnicas Biossensoriais , DNA Catalítico/metabolismo , Manganês/química , Mercúrio/análise , Metaloporfirinas/química , Biocatálise , DNA Catalítico/química , Eletrodos , Exodesoxirribonucleases/química , Exodesoxirribonucleases/metabolismo , Manganês/metabolismo , Metaloporfirinas/metabolismo , Estrutura Molecular , Polimerização , Propriedades de Superfície
16.
Biosens Bioelectron ; 117: 312-318, 2018 Oct 15.
Artigo em Inglês | MEDLINE | ID: mdl-29929158

RESUMO

We presented a novel dual-DNAzyme feedback amplification (DDFA) strategy for Pb2+ detection based on a micropipette tip-based miniaturized homogeneous electrochemical device. The DDFA system involves two rolling circle amplification (RCA) processes in which two circular DNA templates (C1 and C2) have been designed with a Pb2+-DNAzyme sequence (8-17 DNAzyme, anti-GR-5 DNAzyme) and an antisense sequence of G-quadruplex. And a linear DNA (L-DNA), which consists of a primer sequence and a Pb2+-DNAzyme substrate sequence, could hybridize with C1 and C2 to form two DNA complexes. In presence of Pb2+, the Pb2+-DNAzyme exhibited excellent cleavage specificity toward the substrate sequence in L-DNA, leaving primer sequence to trigger two paths of RCA process and finally resulting in massive long nanosolo DNA strands with reduplicated G-quadruplex sequences. And then, methylene blue (MB) could selectively intercalate into G-quadruplex to reduce the free MB concentration in the solution. Thereafter, a carbon fiber microelectrode-based miniaturized electrochemical device was constructed to record the decrease of electrochemical signal due to the much lower diffusion rate of MB/G-quadruplex complex than that of free MB. Therefore, the concentration of Pb2+ could be correctively and sensitively determined in a homogeneous solution by combining DDFA with miniaturized electrochemical device. This protocol not only exhibited high selectivity and sensitivity toward Pb2+ with a detection limit of 0.048 pM, but also reduced sample volume to 10 µL. In addition, this sensing system has been successfully applied to Pb2+ detection in Yangtze River with desirable quantitative manners, which matched well with the atomic absorption spectrometry (AAS).


Assuntos
Técnicas Biossensoriais/métodos , DNA Catalítico/metabolismo , Técnicas Eletroquímicas , Chumbo/análise , Técnicas Biossensoriais/instrumentação , Quadruplex G , Limite de Detecção
17.
Biosens Bioelectron ; 98: 466-472, 2017 Dec 15.
Artigo em Inglês | MEDLINE | ID: mdl-28728006

RESUMO

In this work, an electrochemical impedance biosensor for high sensitive detection of Hg2+ was presented by coupling with Hg2+-induced activation of Mg2+-specific DNAzyme (Mg2+-DNAzyme) for target cycling and hybridization chain reaction (HCR) assembled DNA hydrogel for signal amplification. Firstly, we synthesized two different copolymer chains P1 and P2 by modifying hairpin DNA H3 and H4 with acrylamide polymer, respectively. Subsequently, Hg2+ was served as trigger to activate the Mg2+-DNAzyme for selectively cleavage ribonucleobase-modified substrate in the presence of Mg2+. The partial substrate strand could dissociate from DNAzyme structure, and hybridize with capture probe H1 to expose its concealed sequence for further hybridization. With the help of the exposed sequence, the HCR between hairpin DNA H3 and H4 in P1 and P2 was initiated, and assembled a layer of DNA cross-linked hydrogel on the electrode surface. The formed non-conductive DNA hydrogel film could greatly hinder the interfacial electronic transfer which provided a possibility for us to construct a high sensitive impedance biosensor for Hg2+ detection. Under the optimal conditions, the impedance biosensor showed an excellent sensitivity and selectivity toward Hg2+ in a concentration range of 0.1pM - 10nM with a detection limit of 0.042pM Moreover, the real sample analysis reveal that the proposed biosensor is capable of discriminating Hg2+ ions in reliable and quantitative manners, indicating this method has a promising potential for preliminary application in routine tests.


Assuntos
Técnicas Biossensoriais , DNA/química , Íons/isolamento & purificação , Mercúrio/isolamento & purificação , DNA Catalítico/química , Espectroscopia Dielétrica , Hidrogel de Polietilenoglicol-Dimetacrilato/química , Íons/química , Limite de Detecção , Mercúrio/química , Técnicas de Amplificação de Ácido Nucleico/métodos
18.
Talanta ; 163: 65-71, 2017 Jan 15.
Artigo em Inglês | MEDLINE | ID: mdl-27886771

RESUMO

A label-free electrochemical biosensor for sensitive detection of miRNA-155 was presented by coupling enzyme-catalyzed in situ generation of electronic mediator for signal introduction with catalytic hairpin assembly (CHA) induced target recycling amplification strategy. In this work, alkaline phosphatase (ALP) was adopted to hydrolyze inactive substrate 1-naphthyl phosphate (NPP) to produce phosphate ion (PO43-), which could further react with acidic molybdate to form abundant molybdophosphate anion (PMo12O403-) on the surface of electrode. The produced PMo12O403- could directly generate a strong and stable electrochemical signal for quantitative detection of targets. In addition, CHA induced the cyclic reuse of the target was also employed as an effective strategy for improving the sensitivity of biosensor. This electrochemical method for miRNA-155 detection had achieved a good linear relationship ranging from 10fM to 1nM with a detection limit of 1.64fM. With this assay successfully applied in tumor cell lysates, it holds great potential for early cancer diagnosis by employing miRNA as the effective biomarker.


Assuntos
Biocatálise , Técnicas Biossensoriais/métodos , Sequências Repetidas Invertidas , MicroRNAs/análise , Molibdênio/química , Fosfatos/química , Fosfatase Alcalina/metabolismo , Sondas de DNA/química , Sondas de DNA/genética , Eletroquímica , Desenho de Equipamento , Células HeLa , Humanos , MicroRNAs/química , Nanotubos de Carbono/química
19.
ACS Appl Mater Interfaces ; 8(12): 7683-90, 2016 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-26953735

RESUMO

N-terminal pro-brain natriuretic peptide (NT-proBNP) has been demonstrated to be a sensitive and specific biomarker for heart failure (HF). Surface-enhanced Raman spectroscopy (SERS) technology can be used to accurately detect NT-proBNP at an early stage for its advantages of high sensitivity, less wastage and time consumption. In this work, we have demonstrated a new SERS-based immunosensor for ultrasensitive analysis of NT-proBNP by using metal-organic frameworks (MOFs)@Au tetrapods (AuTPs) immobilized toluidine blue as SERS tag. Here, MOFs@AuTPs complexes were utilized to immobilize antibody and Raman probe for their excellent characteristics of high porosity, large surface area, and good biocompatibility which can obviously enhance the fixing amount of biomolecule. To simplify the experimental operation and improve the uniformity of the substrate, Au nanoparticles functionalized CoFe2O4 magnetic nanospheres (CoFe2O4@AuNPs) were further prepared to assemble primary antibody. Through sandwiched antibody-antigen interactions, the immunosensor can produce a strong SERS signal to detect NT-proBNP fast and effectively. With such design, the proposed immunosensor can achieve a large dynamic range of 6 orders of magnitude from 1 fg mL(-1) to 1 ng mL(-1) with a detection limit of 0.75 fg mL(-1). And this newly designed amplification strategy holds high probability for ultrasensitive immunoassay of NT-proBNP.


Assuntos
Técnicas Biossensoriais/métodos , Insuficiência Cardíaca/sangue , Nanopartículas de Magnetita/química , Peptídeo Natriurético Encefálico/sangue , Fragmentos de Peptídeos/sangue , Cloreto de Tolônio/química , Cobalto/química , Ouro/química , Humanos
20.
J Mater Chem B ; 4(33): 5621-5627, 2016 Sep 07.
Artigo em Inglês | MEDLINE | ID: mdl-32263358

RESUMO

In this work, a series of novel multifunctionalized peryleneteracarboxylic supramolecules were synthesized based on hydrogen bonding interactions between 3,4,9,10-perylenetetracarboxylic acid (PTCA) and amines, which possess large specific surface area, good membrane-forming properties and high stability. Importantly, an interesting phenomenon was found in that these series of supramolecules could conciliate disorderly redox peaks of PTCA and result in a pair of well-defined redox peaks, which were able to act as redox carriers for charge-generation and electron-transportion. And the probable mechanism for this phenomenon was discussed for the first time in detail through the integration of theoretical with practical research. To further reveal the advantages of these novel multifunctionalized supramolecule nanomaterials, PTCA/triethylamine (PTCA/TEA) was chosen as the best candidate for a redox carrier to participate in a "signal-on" aptasensor for thrombin (TB) detection by employing Fe3O4 magnetic beads (MBs) as a good enzyme mimic to catalyze the PTCA/TEA for signal amplification. As a result, a wide linear detection range of 0.0001-50 nM is acquired with a relatively low detection limit of 0.05 pM. And the proposed aptasensor exhibited good specificity and acceptable reproducibility and stability. After all, the explorations between PTCA and amines would set up a meaningful basis in seeking multifunctionalized supramolecule nanomaterials based on PTCA for extending the application of PTCA in a wider range of fields, and exploring the essential reason for the referred peculiar phenomenon for PTCA.

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