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1.
Mol Cell ; 80(4): 607-620.e12, 2020 11 19.
Artigo em Inglês | MEDLINE | ID: mdl-33113344

RESUMO

Aberrant mitophagy has been implicated in a broad spectrum of disorders. PINK1, Parkin, and ubiquitin have pivotal roles in priming mitophagy. However, the entire regulatory landscape and the precise control mechanisms of mitophagy remain to be elucidated. Here, we uncover fundamental mitophagy regulation involving PINK1 and a non-canonical role of the mitochondrial Tu translation elongation factor (TUFm). The mitochondrion-cytosol dual-localized TUFm interacts with PINK1 biochemically and genetically, which is an evolutionarily conserved Parkin-independent route toward mitophagy. A PINK1-dependent TUFm phosphoswitch at Ser222 determines conversion from activating to suppressing mitophagy. PINK1 modulates differential translocation of TUFm because p-S222-TUFm is restricted predominantly to the cytosol, where it inhibits mitophagy by impeding Atg5-Atg12 formation. The self-antagonizing feature of PINK1/TUFm is critical for the robustness of mitophagy regulation, achieved by the unique kinetic parameters of p-S222-TUFm, p-S65-ubiquitin, and their common kinase PINK1. Our findings provide new mechanistic insights into mitophagy and mitophagy-associated disorders.


Assuntos
Drosophila melanogaster/crescimento & desenvolvimento , Mitocôndrias/patologia , Proteínas Mitocondriais/metabolismo , Mitofagia , Fator Tu de Elongação de Peptídeos/metabolismo , Proteínas Quinases/metabolismo , Animais , Citosol/metabolismo , Drosophila melanogaster/genética , Drosophila melanogaster/metabolismo , Feminino , Células HeLa , Humanos , Masculino , Mitocôndrias/genética , Mitocôndrias/metabolismo , Proteínas Mitocondriais/genética , Fator Tu de Elongação de Peptídeos/genética , Fosforilação , Domínios e Motivos de Interação entre Proteínas , Proteínas Quinases/genética , Transporte Proteico , Ubiquitina-Proteína Ligases/genética , Ubiquitina-Proteína Ligases/metabolismo
2.
Plant J ; 118(6): 1991-2002, 2024 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-38549549

RESUMO

As a major worldwide root crop, the mechanism underlying storage root yield formation has always been a hot topic in sweet potato [Ipomoea batatas (L.) Lam.]. Previously, we conducted the transcriptome database of differentially expressed genes between the cultivated sweet potato cultivar "Xushu18," its diploid wild relative Ipomoea triloba without storage root, and their interspecific somatic hybrid XT1 with medium-sized storage root. We selected one of these candidate genes, IbNF-YA1, for subsequent analysis. IbNF-YA1 encodes a nuclear transcription factor Y subunit alpha (NF-YA) gene, which is significantly induced by the natural auxin indole-3-acetic acid (IAA). The storage root yield of the IbNF-YA1 overexpression (OE) plant decreased by 29.15-40.22% compared with the wild type, while that of the RNAi plant increased by 10.16-21.58%. Additionally, IAA content increased significantly in OE plants. Conversely, the content of IAA decreased significantly in RNAi plants. Furthermore, real-time quantitative reverse transcription-PCR (qRT-PCR) analysis demonstrated that the expressions of the key genes IbYUCCA2, IbYUCCA4, and IbYUCCA8 in the IAA biosynthetic pathway were significantly changed in transgenic plants. The results indicated that IbNF-YA1 could directly target IbYUCCA4 and activate IbYUCCA4 transcription. The IAA content of IbYUCCA4 OE plants increased by 71.77-98.31%. Correspondingly, the storage root yield of the IbYUCCA4 OE plant decreased by 77.91-80.52%. These findings indicate that downregulating the IbNF-YA1 gene could improve the storage root yield in sweet potato.


Assuntos
Regulação da Expressão Gênica de Plantas , Ipomoea batatas , Proteínas de Plantas , Raízes de Plantas , Fator de Ligação a CCAAT/genética , Fator de Ligação a CCAAT/metabolismo , Ácidos Indolacéticos/metabolismo , Ipomoea batatas/genética , Ipomoea batatas/crescimento & desenvolvimento , Ipomoea batatas/metabolismo , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Raízes de Plantas/genética , Raízes de Plantas/crescimento & desenvolvimento , Raízes de Plantas/metabolismo , Plantas Geneticamente Modificadas
3.
FASEB J ; 38(14): e23808, 2024 Jul 31.
Artigo em Inglês | MEDLINE | ID: mdl-38994637

RESUMO

Muscle development is a multistep process regulated by diverse gene networks, and circRNAs are considered novel regulators mediating myogenesis. Here, we systematically analyzed the role and underlying regulatory mechanisms of circRBBP7 in myoblast proliferation and differentiation. Results showed that circRBBP7 has a typical circular structure and encodes a 13 -kDa protein. By performing circRBBP7 overexpression and RNA interference, we found that the function of circRBBP7 was positively correlated with the proliferation and differentiation of myoblasts. Using RNA sequencing, we identified 1633 and 532 differentially expressed genes (DEGs) during myoblast proliferation or differentiation, respectively. The DEGs were found mainly enriched in cell cycle- and skeletal muscle development-related pathways, such as the MDM2/p53 and PI3K-Akt signaling pathways. Further co-IP and IF co-localization analysis revealed that VEGFR-1 is a target of circRBBP7 in myoblasts. qRT-PCR and WB analysis further confirmed the positive correlation between VEGFR-1 and circRBBP7. Moreover, we found that in vivo transfection of circRBBP7 into injured muscle tissues significantly promoted the regeneration and repair of myofibers in mice. Therefore, we speculate that circRBBP7 may affect the activity of MDM2 by targeting VEGFR-1, altering the expression of muscle development-related genes by mediating p53 degradation, and ultimately promoting myoblast development and muscle regeneration. This study provides essential evidence that circRBBP7 can serve as a potential target for myogenesis regulation and a reference for the application of circRBBP7 in cattle genetic breeding and muscle injury treatment.


Assuntos
Diferenciação Celular , Proliferação de Células , Desenvolvimento Muscular , Mioblastos , RNA Circular , Animais , Desenvolvimento Muscular/fisiologia , Camundongos , Mioblastos/metabolismo , Mioblastos/citologia , RNA Circular/genética , RNA Circular/metabolismo , Proteínas Proto-Oncogênicas c-mdm2/metabolismo , Proteínas Proto-Oncogênicas c-mdm2/genética , Transdução de Sinais , Músculo Esquelético/metabolismo , Músculo Esquelético/citologia , Camundongos Endogâmicos C57BL , Proteína Supressora de Tumor p53/metabolismo , Proteína Supressora de Tumor p53/genética , Masculino , Linhagem Celular
4.
Nano Lett ; 24(18): 5618-5624, 2024 May 08.
Artigo em Inglês | MEDLINE | ID: mdl-38661108

RESUMO

The oriented attachment (OA) of nanoparticles (NPs) is an important crystal growth mechanism in many materials. However, a comprehensive understanding of the atomic-scale alignment and attachment processes is still lacking. We conducted in situ atomic resolution studies using high-resolution transmission electron microscopy to reveal how two Pt NPs coalesce into a single particle via OA, which involves the formation of atomic-scale links and a grain boundary (GB) between the NPs, as well as GB migration. Density functional theory calculations showed that the system energy changes as a function of the number of disconnections during the coalescence process. Additionally, the formation and annihilation processes of disconnection are always accompanied by the cooperative reorientation motion of atoms. These results further elucidate the growth mechanism of OA at the atomic scale, providing microscopic insights into OA dynamics and a framework for the development of processing strategies for nanocrystalline materials.

5.
Mol Biol Evol ; 40(1)2023 01 04.
Artigo em Inglês | MEDLINE | ID: mdl-36585823

RESUMO

Pangolins are one of nature's most fascinating species being scales covered and myrmecophagous diet, yet relatively little is known about the molecular basis. Here, we combine the multi-omics, evolution, and fundamental proteins feature analysis of both Chinese and Malayan pangolins, highlighting the molecular mechanism of both myrmecophagous diet and scale formation, representing a fascinating evolutionary strategy to occupy the unique ecological niches. In contrast to conserved organization of epidermal differentiation complex, pangolin has undergone large scale variation and gene loss events causing expression pattern and function conversion that contribute to cornified epithelium structures on stomach to adapt myrmecophagous diet. Our assemblies also enable us to discover large copies number of high glycine-tyrosine keratin-associated proteins (HGT-KRTAPs). In addition, highly homogenized tandem array, amino content, and the specific expression pattern further validate the strong connection between the molecular mechanism of scale hardness and HGT-KRTAPs.


Assuntos
Genoma , Pangolins , Animais , Dieta
6.
Cell Biol Toxicol ; 40(1): 48, 2024 Jun 20.
Artigo em Inglês | MEDLINE | ID: mdl-38900277

RESUMO

Aggregation of aberrant proteins is a common pathological hallmark in neurodegeneration such as polyglutamine (polyQ) and other repeat-expansion diseases. Here through overexpression of ataxin3 C-terminal polyQ expansion in Drosophila gut enterocytes, we generated an intestinal obstruction model of spinocerebellar ataxia type3 (SCA3) and reported a new role of nuclear-associated endosomes (NAEs)-the delivery of polyQ to the nucleoplasm. In this model, accompanied by the prominently increased RAB5-positive NAEs are abundant nucleoplasmic reticulum enriched with polyQ, abnormal nuclear envelope invagination, significantly reduced endoplasmic reticulum, indicating dysfunctional nucleocytoplasmic trafficking and impaired endomembrane organization. Consistently, Rab5 but not Rab7 RNAi further decreased polyQ-related NAEs, inhibited endomembrane disorganization, and alleviated disease model. Interestingly, autophagic proteins were enriched in polyQ-related NAEs and played non-canonical autophagic roles as genetic manipulation of autophagic molecules exhibited differential impacts on NAEs and SCA3 toxicity. Namely, the down-regulation of Atg1 or Atg12 mitigated while Atg5 RNAi aggravated the disease phenotypes both in Drosophila intestines and compound eyes. Our findings, therefore, provide new mechanistic insights and underscore the fundamental roles of endosome-centered nucleocytoplasmic trafficking and homeostatic endomembrane allocation in the pathogenesis of polyQ diseases.


Assuntos
Autofagia , Endossomos , Peptídeos , Animais , Peptídeos/metabolismo , Endossomos/metabolismo , Núcleo Celular/metabolismo , Proteínas de Drosophila/metabolismo , Proteínas de Drosophila/genética , Transporte Ativo do Núcleo Celular , Drosophila melanogaster/metabolismo , Drosophila melanogaster/genética , Doença de Machado-Joseph/metabolismo , Doença de Machado-Joseph/genética , Doença de Machado-Joseph/patologia , Enterócitos/metabolismo , Modelos Animais de Doenças , Ataxina-3/metabolismo , Ataxina-3/genética , Drosophila/metabolismo
7.
J Phys Chem A ; 128(9): 1646-1655, 2024 Mar 07.
Artigo em Inglês | MEDLINE | ID: mdl-38414332

RESUMO

Mass-selected photoelectron velocity-map imaging spectroscopy was employed to investigate the geometrical and electronic properties of AuS2H-/0. The comprehensive comparison between the experiment and theoretical calculations establishes that the ground-state AuS2H- anion has a mixed-ligand structure [SAuSH]- with an unsymmetrical S-Au-S unit. Further chemical bonding analyses on AuS2H and comparison with the isoelectronic AuS2- suggest that the unique S-Au-S unit in these species features two three-center, three-electron π-bonding, and one three-center, two-electron σ-bonding. The isoelectronic replacement of the extra electron in AuS2- by the H atom can lead to σ bonding evolution from the electron-sharing bond to the dative bond. These findings are conducive to the fundamental understanding of the intrinsic stability of thiolate-protected gold nanoclusters and their delicate ligand design to achieve desirable properties.

8.
Appl Opt ; 63(3): 721-729, 2024 Jan 20.
Artigo em Inglês | MEDLINE | ID: mdl-38294385

RESUMO

The infrared radiation properties of a satellite provide essential information for space target recognition. In this study, a 3D model of a satellite is obtained using a 3D reconstruction algorithm based on deep learning. The transient temperature field distribution on the target surface is simulated using the ANSYS finite element analysis method by integrating the solar zenith angle, the position of the satellite orbit, and the dynamic angle of the detector. The infrared radiation model is used to analyze the influence of target surface temperature, orbit position, and rotation angle on infrared radiation. The calculated results show that, under the set parameters, the temperature range of all targets is 280-380 K, and the temperature distribution determines the variation trend of radiation intensity. The variation trends of radiation intensity presented by different motion postures of satellites differ considerably. The radiation intensity variation of the triaxial stabilized attitude is relatively stable, whereas the radiation intensity of the spin-stabilized attitude exhibits remarkable periodic fluctuations. The periodic motion of satellite orbit leads to periodic fluctuations in infrared radiation. The obtained infrared radiation data provide support for target detection, tracking, recognition, and infrared detector parameter design.

9.
Int Wound J ; 21(4): e14536, 2024 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-38069543

RESUMO

This study aimed to systematically evaluate the clinical efficacy of Chinese herbal medicine combined with negative pressure wound therapy (NPWT) in the treatment of diabetic foot ulcers (DFU). Computerised searches of the China National Knowledge Infrastructure, Wanfang, Chinese BioMedical Literature Database, PubMed, Cochrane Library and Embase databases were conducted for randomised controlled trials on the use of Chinese herbal medicines combined with NPWT for the treatment of DFU. The search period ranged from the time of establishment of each database to July 2023. Literature screening and data extraction were performed independently by two investigators, and the quality of the included studies was assessed. The meta-analysis was performed using Review Manager 5.4 software. A total of 25 studies were analysed, including 1777 DFUs, with 890 and 887 patients in the experimental and control groups, respectively. The results showed that the treatment of DFUs with a Chinese herbal medicine in combination with NPWT increased the overall effectiveness (odds ratio [OR] = 4.32, 95% confidence interval [CI]: 2.96-6.30, p < 0.001), wound healing rate (mean difference [MD] = 18.35, 95% CI: 13.07-23.64, p < 0.001) and ankle brachial index (MD = 0.10, 95% CI: 0.06-0.14, p < 0.001); reduced the wound healing time (MD = -11.01, 95% CI: -13.25 to -8.78, p < 0.001) and post-treatment wound area (MD = -1.73, 95% CI: -2.46 to -1.01, p < 0.001); decreased the C-reactive protein level (MD = -3.57, 95% CI: -5.13 to -2.00, p < 0.001); and increased vascular endothelial growth factor level (MD = 19.20, 95% CI: 8.36-30.05, p < 0.001). Thus, Chinese herbal medicines combined with NPWT can effectively promote wound healing, reduce inflammation and shorten the disease course in patients with DFU, while demonstrating precise clinical efficacy.


Assuntos
Diabetes Mellitus , Pé Diabético , Medicamentos de Ervas Chinesas , Tratamento de Ferimentos com Pressão Negativa , Humanos , Medicamentos de Ervas Chinesas/uso terapêutico , Pé Diabético/tratamento farmacológico , Fator A de Crescimento do Endotélio Vascular , Cicatrização , Diabetes Mellitus/tratamento farmacológico
10.
BMC Genomics ; 24(1): 598, 2023 Oct 09.
Artigo em Inglês | MEDLINE | ID: mdl-37814244

RESUMO

BACKGROUND: Conus, a highly diverse species of venomous predators, has attracted significant attention in neuroscience and new drug development due to their rich collection of neuroactive peptides called conotoxins. Recent advancements in transcriptome, proteome, and genome analyses have facilitated the identification of conotoxins within Conus' venom glands, providing insights into the genetic features and evolutionary patterns of conotoxin genes. However, the underlying mechanism behind the extraordinary hypervariability of conotoxins remains largely unknown. RESULTS: We analyzed the transcriptomes of 34 Conus species, examining various tissues such as the venom duct, venom bulb, and salivary gland, leading to the identification of conotoxin genes. Genetic variation analysis revealed that a subset of these genes (15.78% of the total) in Conus species underwent positive selection (Ka/Ks > 1, p < 0.01). Additionally, we reassembled and annotated the genome of C. betulinus, uncovering 221 conotoxin-encoding genes. These genes primarily consisted of three exons, with a significant portion showing high transcriptional activity in the venom ducts. Importantly, the flanking regions and adjacent introns of conotoxin genes exhibited a higher prevalence of transposon elements, suggesting their potential contribution to the extensive variability observed in conotoxins. Furthermore, we detected genome duplication in C. betulinus, which likely contributed to the expansion of conotoxin gene numbers. Interestingly, our study also provided evidence of introgression among Conus species, indicating that interspecies hybridization may have played a role in shaping the evolution of diverse conotoxin genes. CONCLUSIONS: This study highlights the impact of adaptive evolution and introgressive hybridization on the genetic diversity of conotoxin genes and the evolution of Conus. We also propose a hypothesis suggesting that transposable elements might significantly contribute to the remarkable diversity observed in conotoxins. These findings not only enhance our understanding of peptide genetic diversity but also present a novel approach for peptide bioengineering.


Assuntos
Conotoxinas , Caramujo Conus , Animais , Conotoxinas/genética , Caramujo Conus/genética , Peptídeos/genética , Genoma , Genômica
11.
J Chem Phys ; 159(11)2023 Sep 21.
Artigo em Inglês | MEDLINE | ID: mdl-37721325

RESUMO

Mass-selected photoelectron velocity-map imaging spectroscopy in conjunction with the density functional theory calculations was employed to investigate the geometrical and chemical bonding properties of NiC3-/0. Both the photoelectron spectrum and photoelectron angular distribution were measured from the spectra, yielding useful geometrical and electronic information about NiC3-/0. The complementary theoretical calculations suggest that the linear and fan-like structures were both populated experimentally in the cluster beam. Further comparative study on the synergistic donor-acceptor interactions in both isomers revealed the side-on coordination-induced bond weakening in the fan-like isomer as compared to the linear isomer. These findings will shed light on the structure-dependent reactivity of transition metal carbides.

12.
Ecotoxicology ; 32(2): 137-149, 2023 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-36680667

RESUMO

Aspirin (acetylsalicylic acid, ASA), a widely used non-steroidal anti-inflammatory drug, was frequently detected in aquatic environments around the world. However, information on the potential toxic effects of aspirin on non-target aquatic invertebrates is limited. In the present study, we investigated the effects of ASA on the transcriptional expressions of antioxidant genes (Nrf2, Keap1, HO-1, GCLC, GPx, TRX, TrxR and Prx1) and DNA methylation genes (DNMT1, DNMT3 and TET2) in Daphnia magna (D. magna)for 24, 48 and 96 h and the changes of antioxidant enzymatic activity and GSH, MDA content for 48 h. The effects of ASA on the life traits of D. magna were also addressed via a 21-days chronic toxicity test. Results showed that the expressions of Nrf2 and its target genes (HO-1, GPx and TrxR, GCLC, TRX and Prx1) were induced to different degrees at 48 h and/or 96 h. The activity of antioxidant enzymes (SOD, CAT, GST and GPx) and MDA content increased but GSH content decreased, indicating that ASA caused oxidative stress in D. magna. ASA also changed the expression of DNA methylation genes, such as DNMT and TET2, in D. magna. We speculated that ASA may affect the antioxidant system responses through regulation of Nrf2/Keap1 signaling pathway, and/or through indirectly influencing DNA methylation levels by DNMT and TET gene expression, but the detailed mechanism needs further investigations. Chronic exposure to ASA for 21 days caused inhibitions on the growth, reproduction and behavior of D. magna (e.g., delaying days to the first brood and shortening the body length). In summary, ASA significantly affected the antioxidant responses of D. magna, and negatively disturbed its life traits in growth, development and reproduction.


Assuntos
Aspirina , Poluentes Químicos da Água , Animais , Aspirina/metabolismo , Aspirina/farmacologia , Antioxidantes/metabolismo , Daphnia , Proteína 1 Associada a ECH Semelhante a Kelch/genética , Proteína 1 Associada a ECH Semelhante a Kelch/metabolismo , Fator 2 Relacionado a NF-E2/genética , Fator 2 Relacionado a NF-E2/metabolismo , Fator 2 Relacionado a NF-E2/farmacologia , Metilação de DNA , Estresse Oxidativo , Poluentes Químicos da Água/toxicidade
13.
Ecotoxicology ; 32(4): 536-543, 2023 May.
Artigo em Inglês | MEDLINE | ID: mdl-37133692

RESUMO

Antibiotics are emerging contaminants and widely used in human healthcare, livestock, and aquaculture. The toxicity posed by antibiotics and their mixtures in sediments depends on their bioavailability. Now, the bioavailability of organic materials can be determined accurately by the diffusive gradients in thin films (DGT) technique. This technique was used for the first time ever in this study to evaluate in detail the integral toxicity of antibiotics in sediments to aquatic biota. Zhelin Bay was selected as a case study, because it is the largest mariculture area in eastern Guangdong, South China. Two antibiotics, chlortetracycline (CTC) (A) and sulfachlorpyridazine (SCP), were detected at average concentrations of 2.83 and 1.14 ng/ml, respectively. The other fifteen antibiotics were undetectable. The single risk assessment based on the risk quotient (RQ) of CTC and SCP shows that a relatively low risk has occurred. After this careful assessment of probabilistic ecotoxicological risks, the combined toxicity of antibiotic mixtures (CTC and SCP) clearly indicates that the toxicity probability of surface sediments to aquatic organisms was relatively low (0.23%).


Assuntos
Antibacterianos , Poluentes Químicos da Água , Humanos , Antibacterianos/toxicidade , Organismos Aquáticos , Ecotoxicologia , Aquicultura , Biota , China , Monitoramento Ambiental/métodos , Sedimentos Geológicos , Poluentes Químicos da Água/toxicidade , Poluentes Químicos da Água/análise
14.
J Environ Manage ; 341: 118091, 2023 Sep 01.
Artigo em Inglês | MEDLINE | ID: mdl-37150170

RESUMO

Seaweeds are important components of marine ecosystems and can form a large biomass in a few months. The decomposition of seaweed litter provides energy and material for primary producers and consumers and is an important link between material circulation and energy flow in the ecosystem. However, during the growth process, part of the seaweed is deposited on the sediment surface in the form of litter. Under the joint action of the environment and organisms, elements enriched in seaweed can be released back into the environment in a short time, causing pollution problems. The cultivation yield of seaweed worldwide reached 34.7 million tons in 2019, but the litter produced during the growth and harvest process has become a vital bottleneck that restricts the further improvement of production and sustainable development of the seaweed cultivation industry. Seaweed outbreaks worldwide occur frequently, producing a mass of litter and resulting in environmental pollution on coasts and economic losses, which have negative effects on coastal ecosystems. The objective of this review is to discuss the decomposition process and ecological environmental effects of seaweed litter from the aspects of the research progress on seaweed litter; the impact of seaweed litter on the environment; and its interaction with organisms. Understanding the decomposition process and environmental impact of seaweed litter can provide theoretical support for coastal environmental protection, seaweed resource conservation and sustainable development of the seaweed cultivation industry worldwide. This review suggests that in the process of large-scale seaweed cultivation and seaweed outbreaks, ageing or falling litter should be cleared in a timely manner, mature seaweed should be harvested in stages, and dried seaweed produced after harvest and washed up on shore should be handled properly to ensure the benefits of environmental protection provided by seaweed growth and sustainable seaweed resource development.


Assuntos
Ecossistema , Alga Marinha , Biomassa , Conservação dos Recursos Naturais , Verduras
15.
BMC Genomics ; 23(1): 560, 2022 Aug 05.
Artigo em Inglês | MEDLINE | ID: mdl-35931984

RESUMO

BACKGROUND: Cyclic nucleotide-gated ion channels (CNGCs) are calcium-permeable channels that participate in a variety of biological functions, such as signaling pathways, plant development, and environmental stress and stimulus responses. Nevertheless, there have been few studies on CNGC gene family in cotton. RESULTS: In this study, a total of 114 CNGC genes were identified from the genomes of 4 cotton species. These genes clustered into 5 main groups: I, II, III, IVa, and IVb. Gene structure and protein motif analysis showed that CNGCs on the same branch were highly conserved. In addition, collinearity analysis showed that the CNGC gene family had expanded mainly by whole-genome duplication (WGD). Promoter analysis of the GhCNGCs showed that there were a large number of cis-acting elements related to abscisic acid (ABA). Combination of transcriptome data and the results of quantitative RT-PCR (qRT-PCR) analysis revealed that some GhCNGC genes were induced in response to salt and drought stress and to exogenous ABA. Virus-induced gene silencing (VIGS) experiments showed that the silencing of the GhCNGC32 and GhCNGC35 genes decreased the salt tolerance of cotton plants (TRV:00). Specifically, physiological indexes showed that the malondialdehyde (MDA) content in gene-silenced plants (TRV:GhCNGC32 and TRV:GhCNGC35) increased significantly under salt stress but that the peroxidase (POD) activity decreased. After salt stress, the expression level of ABA-related genes increased significantly, indicating that salt stress can trigger the ABA signal regulatory mechanism. CONCLUSIONS: we comprehensively analyzed CNGC genes in four cotton species, and found that GhCNGC32 and GhCNGC35 genes play an important role in cotton salt tolerance. These results laid a foundation for the subsequent study of the involvement of cotton CNGC genes in salt tolerance.


Assuntos
Gossypium , Tolerância ao Sal , Ácido Abscísico/farmacologia , Canais de Cátion Regulados por Nucleotídeos Cíclicos/genética , Secas , Regulação da Expressão Gênica de Plantas , Gossypium/genética , Gossypium/metabolismo , Filogenia , Proteínas de Plantas/metabolismo , Tolerância ao Sal/genética , Estresse Fisiológico/genética
16.
Neurochem Res ; 47(2): 279-294, 2022 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-34480710

RESUMO

Studies have shown that diabetes is associated with the occurrence of neurodegenerative diseases and cognitive decline. However, there is currently no effective treatment for diabetes-induced cognitive dysfunction. The superior efficacy of liraglutide (LIRA) for cognitive impairment and numerous neurodegenerative diseases has been widely demonstrated. This study determined the effects of LIRA on diabetic cognitive impairment and on the levels of oxidative stress, lipid peroxidation, iron metabolism and ferroptosis in the hippocampus. Mice were injected daily with liraglutide (200 µg/kg/d) for 5 weeks. LIRA could repair damaged neurons and synapses, and it increased the protein expression levels of PSD 95, SYN, and BDNF. Furthermore, LIRA significantly decreased oxidative stress and lipid peroxidation levels by downregulating the production of ROS and MDA and upregulating SOD and GSH-Px in the serum and hippocampus, and the upregulation of SOD2 expression was also proven. The decreased levels of TfR1 and the upregulation of FPN1 and FTH proteins observed in the LIRA-treated db/db group were shown to reduce iron overload in the hippocampus, whereas the increased expression of Mtft and decreased expression of Mfrn in the mitochondria indicated that mitochondrial iron overload was ameliorated. Finally, LIRA was shown to prevent ferroptosis in the hippocampus by elevating the expression of GPX4 and SLC7A11 and suppressing the excessive amount of ACSL4; simultaneously, the damage to the mitochondria observed by TEM was also repaired. For the first time, we proved in the T2DM model that ferroptosis occurs in the hippocampus, which may play a role in diabetic cognitive impairment. LIRA can reduce oxidative stress, lipid peroxidation and iron overload in diabetic cognitive disorders and further inhibit ferroptosis, thereby weakening the damage to hippocampal neurons and synaptic plasticity and ultimately restoring cognitive function.


Assuntos
Disfunção Cognitiva , Ferroptose , Sobrecarga de Ferro , Animais , Cognição , Disfunção Cognitiva/tratamento farmacológico , Sobrecarga de Ferro/tratamento farmacológico , Liraglutida/farmacologia , Liraglutida/uso terapêutico , Camundongos , Camundongos Endogâmicos , Estresse Oxidativo/fisiologia
17.
Plant Cell Rep ; 41(11): 2159-2171, 2022 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-35943560

RESUMO

KEY MESSAGE: A novel interspecific somatic hybrid combining drought tolerance and high quality of sweet potato and Ipomoea triloba L. was obtained and its genetic and epigenetic variations were studied. Somatic hybridization can be used to overcome the cross-incompatibility between sweet potato (Ipomoea batatas (L.) Lam.) and its wild relatives and transfer useful and desirable genes from wild relatives to cultivated plants. However, most of the interspecific somatic hybrids obtained to date cannot produce storage roots and do not exhibit agronomic characters. In the present study, a novel interspecific somatic hybrid, named XT1, was obtained through protoplast fusion between sweet potato cv. Xushu 18 and its wild relative I. triloba. This somatic hybrid produced storage roots and exhibited significantly higher drought tolerance and quality compared with its cultivated parent Xushu 18. Transcriptome and real-time quantitative PCR (qRT-PCR) analyses revealed that the well-known drought stress-responsive genes in XT1 and I. triloba were significantly up-regulated under drought stress. The genomic structural reconstructions between the two genomes of the fusion parents in XT1 were confirmed using genomic in situ hybridization (GISH) and specific nuclear and cytoplasmic DNA markers. The DNA methylation variations were characterized by methylation-sensitive amplified polymorphism (MSAP). This study not only reveals the significance of somatic hybridization in the genetic improvement of sweet potato but also provides valuable materials and knowledge for further investigating the mechanism of storage root formation in sweet potato.


Assuntos
Ipomoea batatas , Ipomoea , Ipomoea batatas/genética , Ipomoea/genética , Secas , Transcriptoma
18.
Nucleic Acids Res ; 48(10): e57, 2020 06 04.
Artigo em Inglês | MEDLINE | ID: mdl-32232370

RESUMO

Site-specific DNA double-strand breaks have been used to generate knock-in through the homology-dependent or -independent pathway. However, low efficiency and accompanying negative impacts such as undesirable indels or tumorigenic potential remain problematic. In this study, we present an enhanced reduced-risk genome editing strategy we named as NEO, which used either site-specific trans or cis double-nicking facilitated by four bacterial recombination factors (RecOFAR). In comparison to currently available approaches, NEO achieved higher knock-in (KI) germline transmission frequency (improving from zero to up to 10% efficiency with an average of 5-fold improvement for 8 loci) and 'cleaner' knock-in of long DNA fragments (up to 5.5 kb) into a variety of genome regions in zebrafish, mice and rats. Furthermore, NEO yielded up to 50% knock-in in monkey embryos and 20% relative integration efficiency in non-dividing primary human peripheral blood lymphocytes (hPBLCs). Remarkably, both on-target and off-target indels were effectively suppressed by NEO. NEO may also be used to introduce low-risk unrestricted point mutations effectively and precisely. Therefore, by balancing efficiency with safety and quality, the NEO method reported here shows substantial potential and improves the in vivo gene-editing strategies that have recently been developed.


Assuntos
Proteínas de Bactérias/metabolismo , Edição de Genes/métodos , Animais , Quebras de DNA de Cadeia Dupla , Proteínas de Ligação a DNA/metabolismo , Feminino , Técnicas de Introdução de Genes , Genômica , Recombinação Homóloga , Humanos , Mutação INDEL , Macaca fascicularis , Camundongos , Ratos Sprague-Dawley , Recombinases Rec A/metabolismo , Peixe-Zebra/genética
19.
Int J Mol Sci ; 23(2)2022 Jan 08.
Artigo em Inglês | MEDLINE | ID: mdl-35054868

RESUMO

WRKY transcription factors are one of the important families in plants, and have important roles in plant growth, abiotic stress responses, and defense regulation. In this study, we isolated a WRKY gene, ItfWRKY70, from the wild relative of sweet potato Ipomoea trifida (H.B.K.) G. Don. This gene was highly expressed in leaf tissue and strongly induced by 20% PEG6000 and 100 µM abscisic acid (ABA). Subcellar localization analyses indicated that ItfWRKY70 was localized in the nucleus. Overexpression of ItfWRKY70 significantly increased drought tolerance in transgenic sweet potato plants. The content of ABA and proline, and the activity of SOD and POD were significantly increased, whereas the content of malondialdehyde (MDA) and H2O2 were decreased in transgenic plants under drought stress. Overexpression of ItfWRKY70 up-regulated the genes involved in ABA biosynthesis, stress-response, ROS-scavenging system, and stomatal aperture in transgenic plants under drought stress. Taken together, these results demonstrated that ItfWRKY70 plays a positive role in drought tolerance by accumulating the content of ABA, regulating stomatal aperture and activating the ROS scavenging system in sweet potato.


Assuntos
Adaptação Fisiológica , Secas , Ipomoea batatas/metabolismo , Ipomoea batatas/fisiologia , Proteínas de Plantas/metabolismo , Fatores de Transcrição/metabolismo , Adaptação Fisiológica/genética , Sequência de Aminoácidos , Clonagem Molecular , Regulação da Expressão Gênica de Plantas , Genes de Plantas , Ipomoea batatas/genética , Modelos Biológicos , Oryza/metabolismo , Proteínas de Plantas/química , Proteínas de Plantas/genética , Estômatos de Plantas/citologia , Estômatos de Plantas/fisiologia , Plantas Geneticamente Modificadas , Regiões Promotoras Genéticas/genética , Protoplastos/metabolismo , Espécies Reativas de Oxigênio/metabolismo , Saccharomyces cerevisiae/genética , Análise de Sequência de DNA , Estresse Fisiológico/genética , Nicotiana/citologia , Fatores de Transcrição/química , Fatores de Transcrição/genética , Ativação Transcricional/genética , Regulação para Cima/genética
20.
J Environ Manage ; 310: 114729, 2022 May 15.
Artigo em Inglês | MEDLINE | ID: mdl-35192981

RESUMO

The seaweed Gracilaria lemaneiformis can bioremediate heavy metals and improve the environmental quality of mariculture zones. However, the seaweed litter that is produced in the growth and harvest processes becomes one of the important bottlenecks and causes secondary pollution that restricts the development of sustainable seaweed cultivation. Seaweeds exist widely in the coastal areas of the world and are cultivated on a large scale in Asia, but their decomposition process is rarely studied. Experiments that compared decaying dry (dead) and fresh (falling and dying) Gracilaria were conducted to quantify the differences in decomposition rates and heavy metal release in different physiological states. The heavy metals in the seawater and sediment were investigated. The litterbag technique under controlled laboratory conditions was used. The results indicated that the decomposition rates (k) and decay times in 50% (t50%) and 95% (t95%) values varied between dry and fresh Gracilaria. Fresh Gracilaria exhibited a weight loss rate of 15%, and the dry weight loss was 44%. The variations in MAIs (accumulation index of metals) and MR (release rate of metals) between the dry and fresh Gracilaria litters differed significantly, which provides evidence that metals are released back into the environment from Gracilaria litters. The contacted sediments could accelerate the heavy metal release from Gracilaria. Based on our estimates obtained from a 45 d experiment, at least 27.5% of Cd, 16% of Cu, 60.1% of Pb, 72.3% of Zn, 49.4% of Fe, 38.6% of Mn, 68.1% of Cr, and 67.5% of Ni present in the fresh Gracilaria and 37.4% of Cd, 46.2% of Cu, 77.7% of Pb, 53.7% of Zn, 42.7% of Fe, 67.2% of Mn, 75.1% of Cr, and 73.5% of Ni present in the dried Gracilaria were released back into the water when the biomass was left to decay. This study simulates and underscores that Gracilaria has an strong effect on the heavy metal cycles in marine environments and offers a theoretical basis for the development of sustainable seaweed industries in mariculture zones.


Assuntos
Gracilaria , Metais Pesados , Alga Marinha , Poluentes Químicos da Água , Biomassa , China , Monitoramento Ambiental/métodos , Sedimentos Geológicos , Metais Pesados/análise , Água do Mar , Poluentes Químicos da Água/análise
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