Evolution of mitochondrial and nuclear genomes in Pennatulacea.

We examine the phylogeny of sea pens using sequences of whole mitochondrial genomes and the nuclear ribosomal cluster generated through low coverage Illumina sequencing. Taxon sampling includes 30 species in 19 genera representing 13 families. Ancestral state reconstruction shows that most sea pen mitochondrial genomes have the ancestral gene order, and that Pennatulacea with diverse gene orders are found in a single clade. The monophyly of Pennatulidae and Protoptilidae are rejected by both the mitochondrial and nuclear dataset, while the mitochondrial dataset further rejects monophyly of Virgulariidae, and the nuclear dataset rejects monophyly of Kophobelemnidae. We show discordance between nuclear ribosomal gene cluster phylogenies and whole mitochondrial genome phylogenies and highlight key Pennatulacea taxa that could be included in cnidarian genome-wide studies to better resolve the sea pen tree of life. We further illustrate how well frequently sequenced markers capture the overall diversity of the mitochondrial genome and the nuclear ribosomal genes in sea pens.

Bathyptilones: Terpenoids from an Antarctic Sea Pen, Anthoptilum grandiflorum (Verrill, 1879).

: An Antarctic coral belonging to the order Pennatulacea, collected during the 2013 austral autumn by trawl from 662 to 944 m depth, has yielded three new briarane diterpenes, bathyptilone A-C (1-3) along with a trinorditerpene, enbepeanone A (4), which bears a new carbon skeleton. Structure elucidation was facilitated by one- and two-dimensional NMR spectroscopy, mass spectrometry and confirmed by X-ray crystallography. The three compounds were screened in four cancer cell lines. Bathyptilone A displayed selective nanomolar cytotoxicity against the neurogenic mammalian cell line Ntera-2.

Towards Non-Invasive Methods to Assess Population Structure and Biomass in Vulnerable Sea Pen Fields.

Colonies of the endangered red sea pen Pennatula rubra (Cnidaria: Pennatulacea) sampled by trawling in the northwestern Mediterranean Sea were analyzed. Biometric parameters, such as total length, peduncle length, number of polyp leaves, fresh weight, and dry weight, were measured and related to each other by means of regression analysis. Ad hoc models for future inferencing of colonies size and biomass through visual techniques were individuated in order to allow a non-invasive study of the population structure and dynamics of P. rubra.

Exploring the trends of adaptation and evolution of sclerites with regards to habitat depth in sea pens.

Octocorals possess sclerites, small elements comprised of calcium carbonate (CaCO3) that are important diagnostic characters in octocoral taxonomy. Among octocorals, sea pens comprise a unique order (Pennatulacea) that live in a wide range of depths. Habitat depth is considered to be important in the diversification of octocoral species, but a lack of information on sea pens has limited studies on their adaptation and evolution across depth. Here, we aimed to reveal trends of adaptation and evolution of sclerite shapes in sea pens with regards to habitat depth via phylogenetic analyses and ancestral reconstruction analyses. Colony form of sea pens is suggested to have undergone convergent evolution and the loss of axis has occurred independently across the evolution of sea pens. Divergences of sea pen taxa and of sclerite forms are suggested to depend on habitat depths. In addition, their sclerite forms may be related to evolutionary history of the sclerite and the surrounding chemical environment as well as water temperature. Three-flanged sclerites may possess the tolerance towards the environment of the deep sea, while plate sclerites are suggested to be adapted towards shallower waters, and have evolved independently multiple times. The common ancestor form of sea pens was predicted to be deep-sea and similar to family Pseudumbellulidae in form, possessing sclerites intermediate in form to those of alcyonaceans and modern sea pens such as spindles, rods with spines, and three-flanged sclerites with serrated edges sclerites, as well as having an axis and bilateral traits.

Census of Octocorallia (Cnidaria: Anthozoa) of the Azores (NE Atlantic) with a nomenclature update.

Zoological nomenclature revisions are essential for biodiversity studies and indispensable to avoid naming and description of already described species and should be valued in all subsequent studies considering biology, molecular biology, ecology or habitat mapping of deep-sea species. Herein, a thorough revision of the taxonomic literature on Octocorallia since the beginning of deep-sea exploration in the Azores is provided. Since 1870, when the first octocoral, Virgularia mirabilis (Müller, 1776), was recorded in the Azores a cyclic pattern on the taxonomical study of octocorals reveals the deep-sea investigation efforts made on the region at different periods: Prince Albert I of Monaco, Biaçores and recent expeditions. The first decade of this millennium was the peak on taxonomic research of cold-water octocorals in the Azores with 11 publications targeting gorgonians and soft corals (Alcyonacea) and specific sub-orders within it. Ninety-eight names of Octocorallia were found to be given in the economic exclusive zone of the Azores. While 25 names were changed or added to the known Azorean octocoral diversity, 3 species identified in the region and unreported in the reviewed literature, increase the number to 101 species. Twenty-five names were synonymized while three species names were unmasked as errors in need of taxonomical clarification. This is the highest species richness of Octocorallia found in Europe and in any Northern Atlantic archipelago so far, representing ~60% of the most diverse center of endemism of South Africa, with a part in the Eastern Atlantic. Further research on taxonomy may reveal new species to science.

Seasonal trophic ecology of the dominant Antarctic coral Malacobelemnon daytoni (Octocorallia, Pennatulacea, Kophobelemnidae).

Antarctic ecosystems present highly marked seasonal patterns in energy input, which in turn determines the biology and ecology of marine invertebrate species. This relationship is stronger at lower levels of the food web, while upper levels may be less dependent on primary production pulses. The pennatulid Malacobelemnon daytoni, is one of the most abundant species in Potter Cove, Antarctica. In order to assess its trophic ecology and energetic strategies, its biochemical (carbohydrates, proteins and lipids), Fatty Acid (FA) and Stable Isotope (SI) (δ15N and δ13C) compositions were studied over a year-round period. The FA and SI profiles suggest an omnivorous diet and opportunistic feeding strategy for the species. These results, together with biochemical analysis (higher lipid and carbohydrate concentration observed in July and October 2009), support the hypothesis that resuspension events may be an important source of energy, reducing the seasonality of food depletion periods in winter. The evidence presented here gives us a better insight into the success that this species has in Potter Cove and under the current environmental changes experienced by the Antarctic Peninsula.

A new genus and species of pennatulacean octocoral from equatorial West Africa (Cnidaria, Anthozoa, Virgulariidae).

A new genus and species of sea pen or virgulariid pennatulacean from the Gulf of Guinea in the tropical eastern Atlantic is described, and a key to the genera of the Virgulariidae is included. The new genus and species described here adds to the previously described five other genera of the family. It is distinguished by unique sclerite and polyp leaf characters from the superficially-similar genus Virgularia, which lacks conspicuous sclerites in the polyp leaves and coenenchyme (other than minute oval bodies that are generally <0.01 mm in length).