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Polarization-sensitive optoelectronic detection has been achieved by an all-Si detector in the NIR range, based on plasmon hot electron generation/internal photoemission effect. An advanced architecture with a specially designed anisotropic metasurface was developed and structurally optimized for maximizing the internal quantum efficiency (IQE). Assisted by finite difference time domain (FDTD) simulations, the well-designed device exhibits a maximum optical absorption of 80% around 1.45 µm, corresponding to an optical discrimination ratio of 120. Optoelectronic measurements show the peak responsivity and detectivity of 51.2 mA/W and 8.05 × 1010 cm Hz1/2/W, respectively, at 1.45 µm. A high polarization photocurrent ratio of 35 nm is also achieved at 1.55 µm. Moreover, the optoelectronic response can be tuned by a back-gate bias. Last but not least, we built up a model for theoretically estimating the IQE, which provides instructive guidance for further enhancing the optoelectronic performance of hot electron detectors.
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Dried blood spot (DBS) technique has become a new popular topic in anti-doping field in recent years due to its advantages of sample stability and easy operation. It can be employed as a supplementary method to routine urine analysis. However, the small volume of DBS samples (usually 10-20 µL) significantly reduces the application value of this technique. Therefore, the development of sensitive detection methods for the analysis of prohibited substances in DBS is particularly important. In this study, based on the characteristics of low molecular mass peptide (LMMP) drugs, systematic optimization strategies were utilized for the first time to establish a sensitive detection method for LMMPs in DBS. Without using DMSO to enhance mass spectrometry ionization efficiency of peptides, the limits of detection (LOD) ranged between 0.05 and 3.74 ng/mL, significantly better than the previously reported method (0.5-20 ng/mL). This method was validated according to the guidelines of the World Anti-Doping Agency (WADA), and corresponding post-administration study was conducted, demonstrating that the method could be applied to routine analysis of LMMP drugs in DBS. Moreover, since DMSO is not involved, this method also has the potential to simultaneously detect both LMMP and small molecular drugs.
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Dopagem Esportivo , Teste em Amostras de Sangue Seco , Limite de Detecção , Peptídeos , Extração em Fase Sólida , Humanos , Teste em Amostras de Sangue Seco/métodos , Peptídeos/sangue , Peptídeos/urina , Dopagem Esportivo/prevenção & controle , Extração em Fase Sólida/métodos , Detecção do Abuso de Substâncias/métodos , Espectrometria de Massas/métodos , Cromatografia Líquida/métodos , Peso MolecularRESUMO
This work has presented gas sensors based on indium tin oxide (ITO) for the detection of SO2 and NO2. The ITO gas-sensing material was deposited by radio frequency (RF) magnetron sputtering. The properties of gas sensing could be improved by increasing the ratio of SnO2. The response characteristics of the gas sensor for detecting different concentrations of NO2 and SO2 were investigated. In the detection of NO2, the sensitivity was significantly improved by increasing the SnO2 ratio in ITO by 5%, and the response and recovery time were reduced significantly. However, the sensitivity of the sensor decreased with increasing SO2 concentration. From X-ray photoelectron spectroscopy (XPS) analysis, the gas-sensitive response mechanisms were different in the atmosphere of NO2 and SO2. The NO2 was adsorbed by ITO via physisorption but the SO2 had a chemical reaction with the ITO surface. The gas selectivity, temperature dependence, and environmental humidity of ITO-based gas sensors were systematically analyzed. The high detection sensitivity for acidic gas of the prepared sensor presented great potential for acid rain monitoring.
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A Dy(III) coordination polymer (CP), [Dy(spasds)(H2O)2]n (1) (Na2Hspasds = 5-(4-sulfophenylazo)salicylic disodium salt), has been synthesized using a hydrothermal method and characterized. 1 features a 2D layered structure, where the spasda3- anions act as pentadentate ligands, adopting carboxylate, sulfonate and phenolate groups to bridge with four Dy centers in η3-µ1: µ2, η2-µ1: µ1, and monodentate coordination modes, respectively. It possesses a unique (4,4)-connected net with a Schläfli symbol of {44·62}{4}2. The luminescence study revealed that 1 exhibited a broad fluorescent emission band at 392 nm. Moreover, the visual blue color has been confirmed by the CIE plot. 1 can serve as a dual-functional luminescent sensor toward Fe3+ and MnO4- through the luminescence quenching effect, with limits of detection (LODs) of 9.30 × 10-7 and 1.19 × 10-6 M, respectively. The LODs are relatively low in comparison with those of the reported CP-based sensors for Fe3+ and MnO4-. In addition, 1 also has high selectivity and remarkable anti-interference ability, as well as good recyclability for at least five cycles. Furthermore, the potential application of the sensor for the detection of Fe3+ and MnO4- was studied through simulated wastewater samples with different concentrations. The possible sensing mechanisms were investigated using Ultraviolet-Visible (UV-Vis) absorption spectroscopy and density functional theory (DFT) calculations. The results revealed that the luminescence turn-off effects toward Fe3+ and MnO4- were caused by competitive absorption and photoinduced electron transfer (PET), and competitive absorption and inner filter effect (IFE), respectively.
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Direct crop losses due to plant diseases and the measures used to control them have significant agricultural and economic impacts. The shift from diverse small-scale to large-scale genetically uniform monoculture production, along with agricultural intensification and climate change, has led to several known epidemics in man-made agroecosystems that have been rendered more vulnerable to pathogens. One such example is hop growing, which is threatened by highly aggressive hop viroids. Since 2007, almost one-third (about 500 ha) of Slovenian hop gardens have been affected by severe hop stunt disease caused by Citrus bark cracking viroid (CBCVd), which continues to spread despite strict prevention measures. We have developed and validated a multiplex RT-qPCR (mRT-qPCR) for the sensitive detection of CBCVd, Hop latent viroid (HLVd), and Hop stunt viroid (HSVd). Singleplex RT-qPCR assays were designed individually and subsequently combined in a one-step mRT-qPCR assay. Hop-specific mRNA170 and mRNA1192 internal controls were also developed to detect possible PCR inhibition. Analytical specificity was tested on 35 samples from different hosts, geographic regions, and combinations of viroids. Method validation showed that mRT-qPCR had lower sensitivity than singleplex RT-qPCR, while specificity, selectivity, repeatability, and reproducibility remained unchanged. The newly developed assays were found to be robust, reliable, and suitable for large-scale screening of hop viroids.
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Citrus , Humulus , Viroides , Humanos , Viroides/genética , Humulus/genética , Reprodutibilidade dos Testes , Casca de Planta , Reação em Cadeia da Polimerase em Tempo Real/métodosRESUMO
In this study, an FPGA(Field Programmable Gate Array)-based borehole strain measurement system was designed that makes extensive use of digital signal processing operations to replace analog circuits. Through the formidable operational capability of FPGA, the sampled data were filtered and denoised to improve the signal-to-noise ratios. Then, with the goal of not reducing observational accuracy, the signal amplification circuit was removed, the excitation voltage was reduced, and the dynamic range of the primary adjustments was expanded to 130 dB. The system's online compilation function made it more flexible to changes in measurement parameters, allowing it to adapt to various needs. In addition, the efficiency of the equipment use was enhanced. The actual observational results showed that this study's FPGA-based borehole strain measurement system had a voltage resolution higher than 1 µV. Clear solid tides were successfully recorded in low-frequency bands, and seismic wave strain was accurately recorded in high-frequency bands. The arrival times and seismic phases of the seismic waves S and P were clearly recorded, which met the requirements for geophysical field deformation observations. Therefore, the system proposed in this study is of major significance for future analyses of geophysical and crust deformation observations.
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This study proposes a label-free aptamer biosensor for the sensitive detection of malachite green(MG) using gold nanoparticles/multi-walled carbon nanotubes @ titanium dioxide(AuNPs/MWCNTs@TiO2). The nanocomposite provides a large surface area and good electrical conductivity, improving current transfer and acting as a platform for aptamer immobilization. The aptamer and the complementary chain(cDNA) are paired by base complementary to form the recognition element and fixed on the AuNPs by sulfhydryl group, which was modified on the cDNA. Since DNA is negatively charged, the redox probe in the electrolyte is less exposed to the electrode surface under the repulsion of the negative charge, resulting in a low-electrical signal level. When MG is present, the aptamer is detached from the cDNA and binds to MG, the DNA on the electrode surface is reduced, and the rejection of the redox probe is weakened, which leads to an enhanced electrical signal and enables the detection of MG concentration by measuring the change in the electrical signal. Under the best experimental conditions, the sensor demonstrates a good linear relationship for the detection of MG from 0.01 to 1000 ng/mL, the limit of detection (LOD)is 8.68 pg/mL. This sensor is stable, specific, and reproducible, allowing for the detection of various small-molecule pollutants by changing the aptamer, providing an effective method for detecting small-molecule pollutants.
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Aptâmeros de Nucleotídeos , Técnicas Biossensoriais , Nanopartículas Metálicas , Nanocompostos , Nanotubos de Carbono , Ouro/química , DNA Complementar , Nanotubos de Carbono/química , Aptâmeros de Nucleotídeos/química , Nanopartículas Metálicas/química , Técnicas Eletroquímicas/métodos , Nanocompostos/química , Técnicas Biossensoriais/métodos , Eletrodos , Limite de DetecçãoRESUMO
In this study, an extremely highly sensitive enzyme-linked immunosorbent assay (ELISA) based on a newly produced monoclonal antibody (mAb) for the detection of ochratoxin A (OTA) in food samples was developed. OTA-Bovine serum albumin (BSA) conjugate was prepared and used as the immunogen for the production of the mAb. Among four hybridoma clones (8B10, 5C2, 9B7, and 5E11), the antibody from 8B10 displayed the highest affinity recognition for OTA. Based on the mAb (8B10), the IC50 and LOD of the ELISA for OTA were 34.8 pg mL-1 and 1.5 pg mL-1, respectively, which was 1.53~147 times lower than those in published ELISAs, indicating the ultra-sensitivity of our assay. There was no cross-reactivity of the mAb with the other four mycotoxins (AFB1, ZEN, DON, and T-2). Due to the high similarity in molecular structures among OTA, ochratoxin B (OTB), and ochratoxin C (OTC), the CR values of the mAb with OTB and OTC were 96.67% and 22.02%, respectively. Taking this advantage, the ELISA may be able to evaluate total ochratoxin levels in food samples. The recoveries of the ELISA for OTA in spiked samples (corn, wheat, and feed) were 96.5-110.8%, 89.5-94.4%, and 91.8-113.3%; and the RSDs were 5.2-13.6%, 8.2-13.0%, and 7.7-13.7% (n = 3), respectively. The spiked food samples (corn) were measured by ELISA and HPLC-FLD simultaneously. A good correlation between ELISA (x) and HPLC-FLD (y) with the linear regression equation of y = 0.918x - 0.034 (R2 = 0.985, n = 5) was obtained. These results demonstrated that the newly produced mAb-based ELISA was a feasible and ultra-sensitive analytical method for the detection of OTA in food samples.
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Micotoxinas , Ocratoxinas , Ocratoxinas/análise , Anticorpos Monoclonais , Ensaio de Imunoadsorção Enzimática/métodos , Micotoxinas/análise , Contaminação de Alimentos/análiseRESUMO
The differential XAFS technique holds promise for detecting surface changes, which benefits many chemical applications. Phase-sensitive detection (PSD) analysis based on modulated excitation spectroscopy experiments is expected to obtain a high-quality difference spectrum, while the mathematical relationship and experiment parameters remain to be discussed. In this article, an approach to obtaining the difference spectrum from the PSD demodulated spectrum is described and its applicability in different experiment settings is discussed. The results indicate that the demodulated spectrum is almost equal to the difference spectrum when the modulating period is 20 times larger than the relaxation time constant. This approach was subsequently applied to an electrochemical modulation experiment and the demodulated spectrum was analyzed. A reversible lattice shrinking is observed via the fitting of demodulated spectra, which is proportional to the charge amount on the electrode. This approach could be used to quantitatively analyze the modulated excitation XAS data and holds promise for a wide range of electrochemical studies.
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To rapidly identify individuals infected with severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) and control the spread of coronavirus disease (COVID-19), there is an urgent need for highly sensitive on-site virus detection methods. A clustered regularly interspaced short palindromic repeat (CRISPR)/CRISPR-associated protein (Cas)-based molecular diagnostic method was developed for this purpose. Here, a CRISPR system-mediated lateral flow assay (LFA) for SARS-CoV-2 was established based on multienzyme isothermal rapid amplification, CRISPR-Cas13a nuclease, and LFA. To improve the limit of detection (LoD), the crispr RNA, amplification primer, and probe were screened, in addition to concentrations of various components in the reaction system. The LoD of CRISPR detection was improved to 0.25 copy/µl in both fluorescence- and immunochromatography-based assays. To enhance the quality control of the CRISPR-based LFA method, glyceraldehyde-3-phosphate dehydrogenase was detected as a reference using a triple-line strip design in a lateral flow strip. In total, 52 COVID-19-positive and 101 COVID-19-negative clinical samples examined by reverse transcription polymerase chain reaction (RT-PCR) were tested using the CRISPR immunochromatographic detection technique. Results revealed 100% consistency, indicating the comparable effectiveness of our method to that of RT-PCR. In conclusion, this approach significantly improves the sensitivity and reliability of CRISPR-mediated LFA and provides a crucial tool for on-site detection of SARS-CoV-2.
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COVID-19 , Proteínas Associadas a CRISPR , COVID-19/diagnóstico , Proteínas Associadas a CRISPR/genética , Humanos , Técnicas de Amplificação de Ácido Nucleico/métodos , RNA , Reprodutibilidade dos Testes , SARS-CoV-2/genética , Sensibilidade e EspecificidadeRESUMO
The Cry1Ab toxin is usually expressed in genetically modified crops in order to control chewing pests. Although the gold immunochromatography assay (GICA) based on the double-antibody sandwich method has been developed to detect this toxin, its detection sensitivity needs improvement. In this study, Cry1Ab-51 antibodies were immobilized orientationally in a simple and effective way on colloidal gold nanoparticles (CGNPs) using the affinity of staphylococcal protein A (SPA) towards the fragment crystallizable (FC) fragment of mouse immunoglobulin G (IgG). Lateral flow detection test strips, assembled with probes labeled with orientational methods under optimal operational conditions (new probe), were 10 times more sensitive than test strips assembled with probes labeled by adsorption (conventional probe). Experiments showed that the affinity of the new probe was much higher than the conventional probe. The immunochromatography gold strip (ICG strip) assembled using the new probe was highly specific to Cry1Ab with no cross-reaction with other transgenic proteins, and it was proved that the specificity of the new probe had no change. Furthermore, the ICG strips assembled with the new probe could be stored for 12 months under dry conditions without a significant loss of sensitivity. The orientational labeling of the antibodies with SPA on colloidal gold proved to be suitable for improving the sensitivity of the ICG strips.
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Anticorpos Monoclonais/análise , Ouro/química , Nanopartículas Metálicas/química , Proteína Estafilocócica A/química , Anticorpos Monoclonais/imunologia , Cromatografia de Afinidade , Proteína Estafilocócica A/imunologiaRESUMO
Weber's law states that the ratio of the smallest perceptual change in an input signal and the background signal is constant. The law is observed across the perception of weight, light intensity, and sound intensity and pitch. To explain Weber's law observed in steady-state responses, two models of perception have been proposed, namely the logarithmic and the linear model. This paper argues in favour of the linear model, which requires the sensory system to generate linear input-output relationship over several orders of magnitude. To this end, a four-node motif (FNM) is constructed from first principles whose series provides almost linear relationship between input signal and the output over arbitrary range of input signal. Mathematical analysis into the origin of this quasi-linear relationship shows that the series of coherent type-1 feed-forward loop (C1-FFL) is able to provide perfectly linear input-output relationship over arbitrary range of input signal. FNM also reproduces the neuronal data of numerosity detection study on the monkey. The series of FNM also provides a mechanism for sensitive detection over arbitrary range of input signal when the output has an upper limit. Further, the series of FNM provides a general basis for a class of bow-tie architecture where the number of receptors is much lower than the range of input signal and the "decoded output". Besides (quasi-)linear input-output relationship, another example of this class of bow-tie architecture that the series of FNM is able to produce is absorption spectra of cone opsins of humans. Further, the series of FNM and C1-FFL, both, can compute logarithm over arbitrary range of input signal.
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Neurônios , MatemáticaRESUMO
The CRISPR/Cas system is widely used for molecular diagnostics after the discovery of trans-cleavage activity, especially now with the COVID-19 outbreak. However, the majority of contemporary trans-cleavage activity-based CRISPR/Cas biosensors exploited standard single-strand DNA (ssDNA) reporters, which were based on the FRET principle from pioneering research. An in-depth comparison and understanding of various fluorescent readout types are essential to facilitate the outstanding analytical performance of CRISPR probes. We investigated various types of fluorescent reporters of Cas12a comprehensively. Results show that trans-cleavage of Cas12a is not limited to ssDNA and dsDNA reporters, but can be extended to molecular beacons (MB). And MB reporters can achieve superior analytical performance compared with ssDNA and ds DNA reporters at the same conditions. Accordingly, we developed a highly-sensitive SARS-CoV-2 detection with the sensitivity as low as 100 fM were successfully achieved without amplification strategy. The model target of ORF1a could robustly identify the current widespread emerging SARS-CoV-2 variants. A real coronavirus GX/P2V instead of SARS-CoV-2 were chosen for practical application validation. And a minimum of 27 copies/mL was achieved successfully. This inspiration can also be applied to other Cas proteins with trans-cleavage activity, which provides new perspectives for simple, highly-sensitive and universal molecular diagnosis in various applications.
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The rapid and accurate diagnosis of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) at the early stage of virus infection can effectively prevent the spread of the virus and control the epidemic. Here, a colorimetric and fluorescent dual-functional lateral flow immunoassay (LFIA) biosensor was developed for the rapid and sensitive detection of spike 1 (S1) protein of SARS-CoV-2. A novel dual-functional immune label was fabricated by coating a single-layer shell formed by mixing 20â¯nm Au nanoparticles (Au NPs) and quantum dots (QDs) on SiO2 core to produce strong colorimetric and fluorescence signals and ensure good monodispersity and high stability. The colorimetric signal was used for visual detection and rapid screening of suspected SARS-CoV-2 infection on sites. The fluorescence signal was utilized for sensitive and quantitative detection of virus infection at the early stage. The detection limits of detecting S1 protein via colorimetric and fluorescence functions of the biosensor were 1 and 0.033â¯ng/mL, respectively. Furthermore, we evaluated the performance of the biosensor for analyzing real samples. The novel biosensor developed herein had good repeatability, specificity and accuracy, which showed great potential as a tool for rapidly detecting SARS-CoV-2.
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The exosomal miRNA (exo-miRNA) derived from tumor cells contains rich biological information that can effectively aid in the early diagnosis of disease. However, the extremely low abundance imposes stringent requirements for accurate detection techniques. In this study, a novel, protease-free DNA amplification strategy, known as "Rolling Hoop Orbital Amplification" (RHOA), was initially developed based on the design concept of local reaction and inspired by the childhood game of rolling iron ring. Benefiting from the local space constructed by the DNA orbital, the circular DNA enzyme rolls directionally and interacts efficiently with the amplification element, making it nearly 3-fold more productive than conventional free-diffusion amplification. Similarly, the localized cascade nanozyme catalytic system formed by bridging DNA probes also exhibits outperformed than free ones. Therefore, a localized energized high-performance electrochemiluminescence (ECL) biosensor was constructed by bridging cascading nanozymes on the electrode surface through DNA probes generated by RHOA, with an impressive limit of detection (LOD) of 1.5 aM for the detection of exosomal miRNA15a-5p and a stable linearity over a wide concentration range from 10- 2 to 108 fM. Thus, this work is a focused attempt at the localized reaction, which is expected to provide a reliable method for accurately detecting of exo-miRNAs.
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Técnicas Biossensoriais , MicroRNAs , Técnicas Biossensoriais/métodos , DNA/genética , Sondas de DNA , Limite de Detecção , MicroRNAs/genética , Técnicas de Amplificação de Ácido Nucleico/métodosRESUMO
A compact, sensitive laser-based absorption sensor for multispecies monitoring of methane (CH4), acetylene (C2H2) and ammonia (NH3) was developed using a compact multipass gas cell. The gas cell is 8.8 cm long and has an effective optical path length of 3.0 m with a sampling volume of 75 mL. The sensor is composed of three fiber-coupled distributed feedback lasers operating near 1512 nm, 1532 nm and 1654 nm, an InGaAs photodetector and a custom-designed software for data acquisition, signal processing and display. The lasers were scanned over the target absorption features at 1 Hz. First-harmonic-normalized wavelength modulation spectroscopy (f = 3 kHz) with the second harmonic detection (WMS-2f/1f) is employed to eliminate the unwanted power fluctuations of the transmitted laser caused by aerosol/particles scattering, absorption and beam-steering. The multispecies sensor has excellent linear responses (R2 > 0.997) within the gas concentration range of 1-1000 ppm and shows a detection limit of 0.32 ppm for CH4, 0.16 ppm for C2H2 and 0.23 ppm for NH3 at 1 s response time. The Allan-Werle deviation analysis verifies the long-term stability of the sensor, indicating a minimal detection limit of 20-34 ppb were achieved after 60-148 s integration time. Flow test of the portable multispecies sensor is also demonstrated in this work.
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Two-dimensional (2D) organic-inorganic hybrid perovskites, benefiting from their natural anisotropy of quantum-well motifs and optical properties, have shown remarkable polarization-dependent responses superior to the 3D counterparts. Here, for the first time, multiwavelength polarization-sensitive detectors were fabricated by using single crystals of a guanidine-based 2D hybrid perovskite, (BA)2 (GA)Pb2 I7 (where BA+ is n-butylammonium and GA+ is guanidium). Its unique 2D quantum-well structure results in strong crystallographic-dependence of optical absorption. Strikingly, our crystal-based photodetector exhibits a prominent photocurrent dichroic ratio (Imax /Imin ) of â¼2.2 at 520â nm, higher than the typical 2D inorganic materials (GeSe, â¼1.09, PdSe2 , â¼1.8). In addition, notable dichroic ratios of 1.29 and 1.23 at 405â nm and 637â nm are also created for the multiwavelength polarized-light detection. The prominent detecting performances, including low dark current (1.6×10-11 â A), considerable on/off ratio (â¼2×103 ), high photodetectivity (â¼3.3×1011 Jones) and responsivity (â¼12.01â mA W-1 ), make (BA)2 (GA)Pb2 I7 a promising candidate for polarized-light detection. This work sheds light on the rational engineering of new 2D hybrid perovskites for the high-performance optoelectronic device applications.
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The primary reason for foodborne illness is improper seafood safety testing, and hence, an appropriate tool for testing is the key to control the outbreaks. The current study aimed to develop a loop-mediated isothermal amplification (LAMP) assay to detect pathogenic Vibrio parahaemolyticus, important foodborne pathogen, targeting tdh, and trh genes. The specificity of the LAMP assay was good without any false-positive and false-negative results. The assay was highly sensitive and could detect the pathogenic V. parahaemolyticus as low as 1 CFU/reaction in spiked seafood samples and 1 pg of extracted DNA. Out of 62 seafood samples from India's southwest coastal region tested with LAMP assay, eight (12.9%) were positive for trh, and seven (11.29%) samples were positive tdh gene. LAMP-based on tdh and trh was found to be significantly more sensitive (p < 0.05) than conventional PCR and nearly equal sensitive as real-time PCR (RT-PCR) for the detection of pathogenic V. parahaemolyticus. Our study shows that LAMP assay can be a better approach as a point-of-care (POC) diagnostic tool and could detect pathogenic V. parahaemolyticus on seafood samples directly without enrichment and isolation. The high sensitivity and simplicity make LAMP assay a better alternative method than the conventional method and RT-PCR for the detection of pathogens. LAMP assay can be considered as a good alternative to PCR for the routine detection of pathogenic V. parahaemolyticus in seafood.
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Proteínas de Bactérias/genética , Análise de Alimentos/métodos , Contaminação de Alimentos/análise , Proteínas Hemolisinas/genética , Técnicas de Diagnóstico Molecular , Técnicas de Amplificação de Ácido Nucleico , Alimentos Marinhos/análise , Vibrio parahaemolyticus/genética , Animais , Proteínas de Bactérias/isolamento & purificação , Bivalves/microbiologia , DNA Bacteriano/genética , Análise de Alimentos/instrumentação , Proteínas Hemolisinas/isolamento & purificação , Humanos , Penaeidae/microbiologia , Sistemas Automatizados de Assistência Junto ao Leito , Reação em Cadeia da Polimerase em Tempo Real/métodos , Sensibilidade e Especificidade , Vibrio parahaemolyticus/classificação , Vibrio parahaemolyticus/isolamento & purificaçãoRESUMO
G-quadruplex existence was proved in cells by using both antibodies and small molecule fluorescent probes. However, the G-quadruplex probes designed thus far are structure- but not conformation-specific. Recently, a core-extended naphthalene diimide (cex-NDI) was designed and found to provide fluorescent signals of markedly different intensities when bound to G-quadruplexes of different conformations or duplexes. Aiming at evaluating how the fluorescence behaviour of this compound is associated with specific binding modes to the different DNA targets, cex-NDI was here studied in its interaction with hybrid G-quadruplex, parallel G-quadruplex, and B-DNA duplex models by biophysical techniques, molecular docking, and biological assays. cex-NDI showed different binding modes associated with different amounts of stacking interactions with the three DNA targets. The preferential binding sites were the groove, outer quartet, or intercalative site of the hybrid G-quadruplex, parallel G-quadruplex, and B-DNA duplex, respectively. Interestingly, our data show that the fluorescence intensity of DNA-bound cex-NDI correlates with the amount of stacking interactions formed by the ligand with each DNA target, thus providing the rationale behind the conformation-sensitive properties of cex-NDI and supporting its use as a fluorescent probe of G-quadruplex structures. Notably, biological assays proved that cex-NDI mainly localizes in the G-quadruplex-rich nuclei of cancer cells.
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Adenocarcinoma/metabolismo , Neoplasias da Mama/metabolismo , DNA de Forma B/metabolismo , Corantes Fluorescentes/química , Corantes Fluorescentes/metabolismo , Quadruplex G , Imidas/química , Imidas/metabolismo , Substâncias Intercalantes/química , Substâncias Intercalantes/metabolismo , Conformação Molecular , Naftalenos/química , Naftalenos/metabolismo , Adenocarcinoma/patologia , Sítios de Ligação , Neoplasias da Mama/patologia , Sobrevivência Celular/efeitos dos fármacos , Feminino , Corantes Fluorescentes/farmacologia , Humanos , Imidas/farmacologia , Concentração Inibidora 50 , Substâncias Intercalantes/farmacologia , Ligantes , Células MCF-7 , Espectroscopia de Ressonância Magnética/métodos , Simulação de Acoplamento Molecular/métodos , Naftalenos/farmacologiaRESUMO
Sulfonamides in environmental water, food, and feed are a major concern for both aquatic ecosystems and public health, because they may lead to the health risk of drug resistance. Thus, numerous sensitive detection and rapid removal methodologies have been established. This review summarizes the sample preparation techniques and instrumental methods used for sensitive detection of sulfonamides. Additionally, adsorption and photocatalysis for the rapid removal of sulfonamides are also discussed. This review provides a comprehensive perspective on future sulfonamide analyses that have good performance, and on the basic methods for the rapid removal of sulfonamides.