Population response of an apex Antarctic consumer to its prey and climate fluctuations.

A fundamental endeavor in population ecology is to identify the drivers of population dynamics. A few empirical studies included the effect of prey abundance when investigating simultaneously the effects of density-dependence and climate factors on marine top-predator population dynamics. Our aim was to unravel the mechanisms forcing population dynamics of an apex consumer seabird, the south polar skua, using long-term climatic and population time series of the consumer and its prey in Terre Adélie, Antarctica. Influences of density-dependence, climatic factors, and prey abundance with lag effects were tested on the breeding population dynamics with a Bayesian multi-model inference approach. We evidenced a negative trend in breeding population growth rate when density increased. Lagged effects of sea-ice concentration and air temperature in spring and a contemporary effect of prey resources were supported. Remarkably, results outline a reverse response of the south polar skua and one of its main preys to the same environmental factor (sea-ice concentration), suggesting a strong link between skua and penguin dynamics. The causal mechanisms may involve competition for food and space through territorial behavior as well as local climate and prey availability, which probably operate on breeding parameters (breeding propensity, breeding success, or recruitment) rather than on adult survival. Our results provide new insights on the relative importance of factors forcing the population dynamics of an apex consumer including density-dependence, local climate conditions, and direct and indirect effects of prey abundance.

Spread of antibiotic resistance genes to Antarctica by migratory birds.

Recent studies have highlighted the presence of antibiotic resistance genes (ARGs) in Antarctica, which are typically indicative of human activity. However, these studies have concentrated in the Antarctic Peninsula region, and relatively less is known about ARG prevalence in East Antarctica, where human activity levels are lower compared to the Antarctic Peninsula. In addition, the mechanisms of ARG transmission to Antarctica through natural or anthropogenic pathways remain unclear. In this study, we analyzed the fecal samples of Adélie penguins and South polar skuas by using high-throughput sequencing and microfluidic quantitative PCR to detect potential pathogens and ARGs at their breeding colonies near Syowa Station in East Antarctica. These results revealed the presence of several potential pathogens in the fecal matter of both bird species. However, the HF183 marker, which indicates human fecal contamination, was absent in all samples, as well as seawater sampled near the breeding colonies. This suggests that the human fecal contamination was negligible in our study area. In addition to pathogens, we found a significant number of ARGs and metal resistance genes in the feces of both Adélie penguins and South polar skuas, with higher detection rates in skuas than in penguins. To better understand how these birds acquire and transmit these genes, we analyzed the migratory patterns of Adélie penguins and South polar skuas by geolocator tracking. We found that the skuas migrate to the tropical and subtropical regions of the Indian Ocean during the austral winter. On the other hand, Adélie penguins exhibited a more localized migration pattern, mainly staying within Antarctic waters. Because the Indian Ocean is considered one of the major reservoirs of ARGs, South polar skuas might be exposed to ARGs during their winter migration and transfer these genes to Antarctica.

Bottom-up effects drive the dynamic of an Antarctic seabird predator-prey system.

Understanding how populations respond to variability in environmental conditions and interspecific interactions is one of the biggest challenges of population ecology, particularly in the context of global change. Although many studies have investigated population responses to climate change, very few have explicitly integrated interspecific relationships when studying these responses. In this study, we aimed to understand the combined effects of interspecific interactions and environmental conditions on the demographic parameters of a prey-predator system of three sympatric seabird populations breeding in Antarctica: the south polar skua (Catharacta maccormicki) and its two main preys during the breeding season, the Adélie penguin (Pygoscelis adeliae) and the emperor penguin (Aptenodytes forsteri). We built a two-species integrated population model (IPM) with 31 years of capture-recapture and count data and provided a framework that made it possible to estimate the demographic parameters and abundance of a predator-prey system in a context where capture-recapture data were not available for one species. Our results showed that predator-prey interactions and local environmental conditions differentially affected south polar skuas depending on their breeding state of the previous year. Concerning prey-predator relationships, the number of Adélie penguin breeding pairs showed a positive effect on south polar skua survival and breeding probability, and the number of emperor penguin dead chicks showed a positive effect on the breeding success of south polar skuas. In contrast, there was no evidence for an effect of the number of south polar skuas on the demography of Adélie penguins. We also found an important impact of sea ice conditions on both the dynamics of south polar skuas and Adélie penguins. Our results suggest that this prey-predator system is mostly driven by bottom-up processes and local environmental conditions.

Diet and debris ingestion of skuas on Fildes Peninsula, King George Island, Antarctica.

Using pellet analysis, we characterized the diet and plastic and non-plastic debris ingestion of skuas (Catharacta spp.) during 2017-2020 summer seasons along the coastal sector of Fildes Peninsula (King George Island, Antarctica). In addition, we conducted the same analysis during the 2020 breeding season on reproductive territories of south polar (Catharacta maccormicki) and brown (Catharacta antarctica lonnbergi) skua. Our results confirm the generalist and opportunistic habits of both skua species. Additionally, it has been proposed that brown skua displaces south polar skua from penguin breeding colonies given its higher competitive abilities, and our results suggest this might not have happened during the study period. Along with evidence from other studies, this work underlines the idea that potential local anthropogenic sources of plastic and non-plastic debris at Fildes Peninsula need to be further addressed to improve current mitigation efforts.

Prey density affects predator foraging strategy in an Antarctic ecosystem.

Studying the effects of prey distribution on predator behavior is complex in systems where there are multiple prey species. The role of prey density in predator behavior is rarely studied in closed ecosystems of one predator species and one prey species, despite these being an ideal opportunity to test these hypotheses. In this study, we investigate the effect of prey density on the foraging behavior of a predatory species in an isolated Antarctic ecosystem of effectively a single predatory species and a single prey species. We use resource selection models to compare prey density in areas utilized by predators (obtained from fine-scale GPS telemetry data) to prey density at randomly generated points (pseudoabsences) throughout the available area. We demonstrate that prey density of breeding Antarctic petrels (Thalassoica antarctica) is negatively associated with the probability of habitat use in its only predator, the south polar skua (Catharacta maccormicki). Skuas are less likely to utilize habitats with higher petrel densities, reducing predation in these areas, but these effects are present during chick rearing only and not during incubation. We suggest that this might be caused by successful group defense strategies employed by petrel chicks, primarily spitting oil at predators.

Protein Deimination and Extracellular Vesicle Profiles in Antarctic Seabirds.

Pelagic seabirds are amongst the most threatened of all avian groups. They face a range of immunological challenges which seem destined to increase due to environmental changes in their breeding and foraging habitats, affecting prey resources and exposure to pollution and pathogens. Therefore, the identification of biomarkers for the assessment of their health status is of considerable importance. Peptidylarginine deiminases (PADs) post-translationally convert arginine into citrulline in target proteins in an irreversible manner. PAD-mediated deimination can cause structural and functional changes in target proteins, allowing for protein moonlighting in physiological and pathophysiological processes. PADs furthermore contribute to the release of extracellular vesicles (EVs), which play important roles in cellular communication. In the present study, post-translationally deiminated protein and EV profiles of plasma were assessed in eight seabird species from the Antarctic, representing two avian orders: Procellariiformes (albatrosses and petrels) and Charadriiformes (waders, auks, gulls and skuas). We report some differences between the species assessed, with the narrowest EV profiles of 50-200 nm in the northern giant petrel Macronectes halli, and the highest abundance of larger 250-500 nm EVs in the brown skua Stercorarius antarcticus. The seabird EVs were positive for phylogenetically conserved EV markers and showed characteristic EV morphology. Post-translational deimination was identified in a range of key plasma proteins critical for immune response and metabolic pathways in three of the bird species under study; the wandering albatross Diomedea exulans, south polar skua Stercorarius maccormicki and northern giant petrel. Some differences in Gene Ontology (GO) biological and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways for deiminated proteins were observed between these three species. This indicates that target proteins for deimination may differ, potentially contributing to a range of physiological functions relating to metabolism and immune response, as well as to key defence mechanisms. PAD protein homologues were identified in the seabird plasma by Western blotting via cross-reaction with human PAD antibodies, at an expected 75 kDa size. This is the first study to profile EVs and to identify deiminated proteins as putative novel plasma biomarkers in Antarctic seabirds. These biomarkers may be further refined to become useful indicators of physiological and immunological status in seabirds-many of which are globally threatened.

Diverse and highly recombinant anelloviruses associated with Weddell seals in Antarctica.

The viruses circulating among Antarctic wildlife remain largely unknown. In an effort to identify viruses associated with Weddell seals (Leptonychotes weddellii) inhabiting the Ross Sea, vaginal and nasal swabs, and faecal samples were collected between November 2014 and February 2015. In addition, a Weddell seal kidney and South Polar skua (Stercorarius maccormicki) faeces were opportunistically sampled. Using high throughput sequencing, we identified and recovered 152 anellovirus genomes that share 63-70% genome-wide identities with other pinniped anelloviruses. Genome-wide pairwise comparisons coupled with phylogenetic analysis revealed two novel anellovirus species, tentatively named torque teno Leptonychotes weddellii virus (TTLwV) -1 and -2. TTLwV-1 (n = 133, genomes encompassing 40 genotypes) is highly recombinant, whereas TTLwV-2 (n = 19, genomes encompassing three genotypes) is relatively less recombinant. This study documents ubiquitous TTLwVs among Weddell seals in Antarctica with frequent co-infection by multiple genotypes, however, the role these anelloviruses play in seal health remains unknown.

Complete mitochondrial genome of the South Polar Skua Stercorarius maccormicki (Charadriiformes, Stercorariidae) in Antarctica.

The South Polar Skua, gull-like seabirds is the most fascinating Antarctic seabirds that lay two eggs at sites free of snow and ice and predominantly hunt pelagic fish and penguins. Blood samples of the South Polar Skua Stercorarius maccormicki was collected during the summer activity near King Sejong station in Antarctica. The complete mitochondrial DNA sequence of S. maccormicki was 16,669 bp, showing conserved genome structure and orientation found in other avian species. The control region of S. maccormicki was 93- and 80 bp shorter compared to those of Chroicocephalus saundersi and Synthliboramphus antiquus respectively. Interestingly, there is a (CAACAAACAA)6 repeat sequence in the control region. Our results of S. maccormicki mt genome including the repeat sequence, may provide useful genetic information for phylogenetic and phylogeographic histories of the southern skua complex.