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1.
Arch Virol ; 169(9): 173, 2024 Aug 06.
Artigo em Inglês | MEDLINE | ID: mdl-39105883

RESUMO

In this study, seven bee viruses of significant importance for bee health in Türkiye were investigated using one-step RT-PCR. For this purpose, larvae from 1183 hives and adult bees from 1196 hives were sampled from 400 apiaries in 40 provinces. The prevalence of viral infections in hives was as follows: acute bee paralysis virus (ABPV), 6.4%; black queen cell virus (BQCV), 77%; chronic bee paralysis virus (CBPV), 3.2%; deformed wing virus (DWV), 63.8%; Israel acute bee paralysis virus (IAPV), 7%; Kashmir bee virus (KBV), 2.7%; sacbrood virus (SBV), 49.7%. Moreover, 50 different combinations of viral infections were identified in the hives. While dual infections (36.1%) were the most common in hives, triple infections with BQCV, DWV, and SBV were found to have the highest prevalence (22.1%). At least one viral infection was detected in all of the apiaries tested. Phylogenetic analysis showed that the isolates from this study generally exhibited the highest similarity to previously reported Turkish isolates. When similarity ratios and the locations and types of amino acid mutations were analyzed, it was observed that the isolates from our study exhibited high similarity to isolates from various countries, including China, the United Kingdom, Syria, and Germany.


Assuntos
Vírus de Insetos , Filogenia , Vírus de RNA , Animais , Abelhas/virologia , Vírus de Insetos/genética , Vírus de Insetos/isolamento & purificação , Vírus de Insetos/classificação , Prevalência , Vírus de RNA/genética , Vírus de RNA/isolamento & purificação , Vírus de RNA/classificação , Larva/virologia , Coinfecção/virologia , Coinfecção/epidemiologia , Dicistroviridae/genética , Dicistroviridae/isolamento & purificação , Dicistroviridae/classificação
2.
J Fish Dis ; 44(6): 803-811, 2021 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-33277748

RESUMO

The peak period of morbidity and death in cultured Procambarus clarkii is around May each year and is called the "Black May" disease. The pathogen causing "Black May" disease is believed to be a white spot syndrome virus (WSSV). In 2018, a significant number of P. clarkii died in the pond culture of Xinglong Township, Xuyi County. Two sampling tests on the affected pond showed that, in addition to WSSV, a novel Dicistro-like virus (PcDV) was present. Genomic sequence analysis indicated that this new virus belongs to the Dicistroviridae family, Picornaviridaes order. A high number of spherical particles were detected in gill tissues of P. clarkii with "Black May" disease by electron microscopy, a finding consistent with viruses from the Picornaviridaes order. From October 2018 to September 2019, we took monthly samples from Hubei, Jiangsu and Anhui provinces, and tested for the presence of PcDV and WSSV in P. clarkii. The detection rates of PcDV in P. clarkii peaked from April to June, consistent with the onset of the "Black May" disease. In conclusion, we believe that the discovery of PcDV will provide new research directions for investigating the pathogens causing "Black May" disease in P. clarkii.


Assuntos
Astacoidea/virologia , Dicistroviridae/isolamento & purificação , Animais , China , Análise de Sequência de RNA
3.
Arch Virol ; 165(11): 2715-2719, 2020 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-32776255

RESUMO

We report two novel RNA viruses from yellow crazy ants, (Anoplolepis gracilipes) detected using next-generation sequencing. The complete genome sequences of the two viruses were 10,662 and 8,238 nucleotides in length, respectively, with both possessing two open reading frames with three conserved protein domains. The genome organization is characteristic of members of the genus Triatovirus in the family Dicistroviridae. The two novel viruses were tentatively named "Anoplolepis gracilipes virus 1" and "Anoplolepis gracilipes virus 2" (AgrV-1 and AgrV-2). Phylogenetic analyses based on amino acid sequences of the non-structural polyprotein (ORF1) suggest that the two viruses are triatovirus-like viruses. This is the first report on the discovery of novel triatovirus-like viruses in yellow crazy ants with a description of their genome structure (two ORFs and conserved domains of RNA helicase, RNA-dependent RNA polymerase, and capsid protein), complete sequences, and viral prevalence across the Asia-Pacific region.


Assuntos
Formigas/virologia , Dicistroviridae/classificação , Dicistroviridae/isolamento & purificação , Genoma Viral , Filogenia , Sequência de Aminoácidos , Animais , Proteínas do Capsídeo/genética , Japão , Malásia , Fases de Leitura Aberta , RNA Helicases/genética , RNA Viral/genética , RNA Polimerase Dependente de RNA/genética , Sequenciamento Completo do Genoma
4.
Arch Virol ; 165(9): 1987-1994, 2020 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-32588240

RESUMO

A new virus belonging to the family Dicistroviridae was identified in the hibiscus-infesting cotton mealybug Phenacoccus solenopsis. Using high-throughput sequencing (HTS) on an Illumina HiSeq platform, a single contig of the complete genome sequence was assembled. The authenticity of the sequence obtained by HTS was validated by RT-PCR and Sanger sequencing of the amplicons, which was also employed for the 3' untranslated region (UTR). The 5' UTR was sequenced using a rapid amplification of cDNA ends kit. A large segment encompassing the whole genome was amplified by RT-PCR using viral RNA extracted from mealybugs. A whole-genome nucleotide sequence comparison showed 89% sequence identity to aphid lethal paralysis virus (ALPV), covering a short segment of 44 bp. Pairwise amino acid sequence comparisons of the protein encoded by open reading frame (ORF) 2 with its counterparts in the GenBank database, showed less than 40% identity to several members of the genus Cripavirus, including ALPV. Phylogenetic analysis based on the deduced amino acid sequence of the ORF 2 protein showed that the new virus grouped with members of the genus Cripavirus. The intergenic region (IGR) internal ribosome entry site (IRES) showed the conserved nucleotides of a type I IGR IRES and had two bulge sites, three pseudoknots, and two stem-loops. Virus morphology visualized by transmission electron microscopy demonstrated spherical particles with a diameter of ~30 nm. This virus was the only arthropod virus identified in the sampled mealybugs, and the purified virus was able to infect cotton mealybugs. To the best of our knowledge, this is the first report of a Dicistroviridae family member infecting P. solenopsis, and we have tentatively named this virus Phenacoccus solenopsis virus (PhSoV).


Assuntos
Dicistroviridae/isolamento & purificação , Hemípteros/virologia , Vírus de Insetos/isolamento & purificação , Regiões 5' não Traduzidas , Animais , Sequência de Bases , Dicistroviridae/classificação , Dicistroviridae/genética , Genoma Viral , Vírus de Insetos/classificação , Vírus de Insetos/genética , Sítios Internos de Entrada Ribossomal , Fases de Leitura Aberta , Filogenia , Proteínas Virais/genética
5.
Virus Genes ; 55(3): 368-380, 2019 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-30847760

RESUMO

The red imported fire ant (Solenopsis invicta) escaped its natural enemies when it was introduced into North America in the 1930s from South America. US efforts have focused on discovery of natural enemies, like viruses, to provide sustainable control of the ant. Nine new virus genomes were sequenced from the invasive fire ant Solenopsis invicta using metagenomic RNA sequencing. The virus genomes were verified by Sanger sequencing and random amplification of cDNA ends reactions. In addition to the nine new virus genomes, the previously described Solenopsis viruses were also detected, including Solenopsis invicta virus 1 (SINV-1), SINV-2, SINV-3, SINV-4, SINV-5, and Solenopsis invicta densovirus. The virus sequences came from S. invicta workers, larvae, pupae, and dead workers taken from midden piles collected from across the ant's native range in Formosa, Argentina. One of the new virus genomes (Solenopsis invicta virus 6) was also detected in populations of North American S. invicta. Phylogenetic analysis of the RNA dependent RNA polymerase, the entire nonstructural polyprotein, and genome characteristics were used to tentatively taxonomically place these new virus genome sequences; these include four new species of Dicistroviridae, one Polycipiviridae, one Iflaviridae, one Totiviridae, and two genome sequences that were too taxonomically divergent to be placed with certainty. The S. invicta virome is the best characterized from any ant species and includes 13 positive-sense, single-stranded RNA viruses (Solenopsis invicta virus 1 to Solenopsis invicta virus 13), one double-stranded RNA virus (Solenopsis midden virus), and one double-stranded DNA virus (Solenopsis invicta densovirus). These new additions to the S. invicta virome offer potentially new classical biological control agents for S. invicta.


Assuntos
Formigas/virologia , Dicistroviridae/genética , Metagenômica , Vírus de RNA/genética , Animais , Argentina , Dicistroviridae/isolamento & purificação , Genoma Viral/genética , Vírus de RNA/isolamento & purificação , RNA Viral/genética , Análise de Sequência de RNA
6.
J Invertebr Pathol ; 168: 107256, 2019 11.
Artigo em Inglês | MEDLINE | ID: mdl-31614126

RESUMO

We determined the presence of six viruses in different bee species collected in subtropical environments. Deformed wing virus (DWV) and black queen cell virus (BQCV) were detected in >90% of honey bee samples and in 50-100% of four stingless bee, two bumble bee and one solitary bee species. Additionally, minus DWV and BQCV RNA strands were detected, indicating that the viruses replicate in several hosts. This is the first report of honey bee viruses replicating in six wild bee species in the tropics. If pathogenic to them, viral infections could result in negative impacts in agricultural and unmanaged ecosystems.


Assuntos
Abelhas/virologia , Dicistroviridae/isolamento & purificação , Vírus de RNA/isolamento & purificação , Viroses/transmissão , Animais , Animais Selvagens , Reservatórios de Doenças , Ecossistema , México , Polinização , Replicação Viral
7.
Virol J ; 14(1): 90, 2017 05 03.
Artigo em Inglês | MEDLINE | ID: mdl-28468626

RESUMO

BACKGROUND: The small brown planthopper (SBPH) is an important pest of cereal crops and acts as a transmission vector for multiple RNA viruses. Rapid diagnosis of virus in the vector is crucial for efficient forecast and control of viral disease. Reverse transcription polymerase chain reaction (RT-PCR) is a rapid, sensitive and reliable method for virus detection. The traditional RT-PCR contains a RNA isolation step and is widely used for virus detection in insect. However, using the traditional RT-PCR for detecting RNA virus in individual SBPHs becomes challenging because of the expensive reagents and laborious procedure associated with RNA isolation when processing a large number of samples. RESULTS: We established a simplified RT-PCR method without RNA isolation for RNA virus detection in a single SBPH. This method is achieved by grinding a single SBPH in sterile water and using the crude extract directly as the template for RT-PCR. The crude extract containing the virus RNA can be prepared in approximately two minutes. Rice stripe virus (RSV), rice black streaked dwarf virus (RBSDV) and Himetobi P virus (HiPV) were successfully detected using this simplified method. The detection results were validated by sequencing and dot immunobinding assay, indicating that this simplified method is reliable for detecting different viruses in insects. The evaluation of the sensitivity of this method showed that both RSV and HiPV can be detected when the cDNA from the crude extract was diluted up to 103 fold. Compared to the traditional RT-PCR with RNA isolation, the simplified RT-PCR method greatly reduces the sample processing time, decreases the detection cost, and improves the efficiency by avoiding RNA isolation. CONCLUSIONS: A simplified RT-PCR method is developed for rapid detection of RNA virus in a single SBPH without the laborious RNA isolation step. It offers a convenient alternative to the traditional RT-PCR method.


Assuntos
Hemípteros/virologia , Insetos Vetores/virologia , Vírus de RNA/isolamento & purificação , RNA Viral/isolamento & purificação , Reação em Cadeia da Polimerase Via Transcriptase Reversa/métodos , Animais , DNA Complementar/isolamento & purificação , Dicistroviridae/genética , Dicistroviridae/isolamento & purificação , Immunoblotting/métodos , Insetos/virologia , Vírus de Plantas/genética , Vírus de Plantas/isolamento & purificação , RNA Viral/análise , Reoviridae/genética , Reoviridae/isolamento & purificação , Sensibilidade e Especificidade , Tenuivirus/genética , Tenuivirus/isolamento & purificação
8.
J Invertebr Pathol ; 147: 51-59, 2017 07.
Artigo em Inglês | MEDLINE | ID: mdl-27498219

RESUMO

Managed insect pollinators are indispensable in modern agriculture. They are used worldwide not only in the open field but also in greenhouses to enhance fruit set, seed production, and crop yield. Managed honey bee (Apis mellifera, Apis cerana) colonies provide the majority of commercial pollination although other members of the superfamily Apoidea are also exploited and commercialized as managed pollinators. In the recent past, it became more and more evident that viral diseases play a key role in devastating honey bee colony losses and it was also recognized that many viruses originally thought to be honey bee specific can also be detected in other pollinating insects. However, while research on viruses infecting honey bees started more than 50years ago and the knowledge on these viruses is growing ever since, little is known on virus diseases of other pollinating bee species. Recent virus surveys suggested that many of the viruses thought to be honey bee specific are actually circulating in the pollinator community and that pollinator management and commercialization of pollinators provide ample opportunity for viral diseases to spread. However, the direction of disease transmission is not always clear and the impact of these viral diseases on the different hosts remains elusive in many cases. With our review we want to provide an up-to-date overview on the viruses detected in different commercialized pollinators in order to encourage research in the field of pollinator virology that goes beyond molecular detection of viruses. A deeper understanding of this field of virology is urgently needed to be able to evaluate the impact of viruses on pollinator health and the role of different pollinators in spreading viral diseases and to be able to decide on appropriate measures to prevent virus-driven pollinator decline.


Assuntos
Abelhas/virologia , Vírus de Insetos/classificação , Animais , Dicistroviridae/classificação , Dicistroviridae/isolamento & purificação , Vírus de Insetos/isolamento & purificação , Vírus de RNA/classificação , Vírus de RNA/isolamento & purificação
9.
Rev Argent Microbiol ; 49(4): 311-314, 2017.
Artigo em Inglês | MEDLINE | ID: mdl-28888671

RESUMO

The family Dicistroviridae comprises three genera and about twenty species of RNA virus, most of them with health or agricultural importance. The Triatoma virus (TrV) is the only entomopathogenic virus identified in triatomine bugs up to the present. TrV replicates within the intestinal epithelial cells, causing high mortality rate and delayed development of the molt of these bugs. TrV has been proposed as a biological control agent for vectors of Chagas disease. Viral particles were purified from feces of 1, 5 and 10 insects from an experimental colony of Triatoma infestans infected with TrV. Viral concentration and infectivity were corroborated using polyacrylamide gels and RT-PCR, respectively. In this work we report a method of viral purification that allows to reduce necessary reagents and time, using a very small amount of fecal matter.


Assuntos
Dicistroviridae , Triatoma , Animais , Doença de Chagas , Dicistroviridae/isolamento & purificação , Fezes/microbiologia , Insetos Vetores , Triatoma/microbiologia
10.
J Gen Virol ; 97(3): 706-714, 2016 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-26746854

RESUMO

A Cripavirus-like long unique sequence was identified during transcriptome sequencing of the brown planthopper (BPH), Nilaparvata lugens. This unique sequence demonstrated high similarity with the whole-genome sequence of cricket paralysis virus, including 5' and 3' untranslated regions; thus we considered it the whole genome of a new virus. We propose that the virus be named Nilaparvata lugens C virus (NlCV). The plus-strand RNA genome spanned 9144 nt, excluding a 3' poly(A) tail with two large ORFs encoding structural and non-structural proteins, respectively. Detection of NlCV in BPH honeydew raised the hypothesis of horizontal transmission of the virus. Honeydew from viruliferous BPHs was used to feed non-viruliferous insects, the results of which indicated that the BPH could acquire NlCV through feeding and that the virus could multiply in the insect body. A tissue-specific distribution test using real-time quantitative PCR demonstrated that NlCV was mainly present in the reproductive organs, and the virus was detected in eggs laid by viruliferous female insects using nested PCR, indicating the possibility of vertical transmission as well. As no significant symptom was detected in the viruliferous BPH, NlCV is considered a new commensal virus of BPH. Interestingly, this virus was also detected in two other hemipteran insects, the white-backed planthopper and the horned gall aphid, indicating that NlCV might be present in many other hemipteran insects and have a wide host range.


Assuntos
Dicistroviridae/isolamento & purificação , Hemípteros/virologia , Animais , Dicistroviridae/classificação , Dicistroviridae/genética , Feminino , Masculino , Dados de Sequência Molecular , Fases de Leitura Aberta , Filogenia , Proteínas Virais/genética
11.
J Gen Virol ; 97(8): 1981-1989, 2016 08.
Artigo em Inglês | MEDLINE | ID: mdl-27230225

RESUMO

Although it is known that Israeli acute paralysis virus (IAPV) can cause bee mortality, the symptoms of paralysis and the distribution of the virus in different body tissues and their potential to respond with an increase of the siRNA antiviral immune system have not been studied. In this project we worked with Bombus terrestris, which is one of the most numerous bumblebee species in Europe and an important pollinator for wild flowers and many crops in agriculture. Besides the classic symptoms of paralysis and trembling prior to death, we report a new IAPV-related symptom, crippled/immobilized forelegs. Reverse-transcriptase quantitative PCR showed that IAPV accumulates in different body tissues (midgut, fat body, brain and ovary). The highest levels of IAPV were observed in the fat body. With fluorescence in situ hybridization (FISH) we detected IAPV in the Kenyon cells of mushroom bodies and neuropils from both antennal and optic lobes of the brain in IAPV-infected workers. Finally, we observed an induction of Dicer-2, a core gene of the RNAi antiviral immune response, in the IAPV-infected tissues of B. terrestris workers. According to our results, tissue tropism and the induction strength of Dicer-2 could not be correlated with virus-related paralysis symptoms.


Assuntos
Estruturas Animais/virologia , Abelhas/virologia , Dicistroviridae/isolamento & purificação , Dicistroviridae/patogenicidade , Ribonuclease III/análise , Estruturas Animais/patologia , Animais , Abelhas/imunologia , Europa (Continente) , Hibridização in Situ Fluorescente , Infecções por Vírus de RNA/imunologia , Infecções por Vírus de RNA/patologia , Infecções por Vírus de RNA/veterinária , Infecções por Vírus de RNA/virologia , RNA Viral/análise , Reação em Cadeia da Polimerase em Tempo Real , Reação em Cadeia da Polimerase Via Transcriptase Reversa
12.
J Econ Entomol ; 108(3): 1304-12, 2015 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-26470259

RESUMO

Himetobi P virus (HiPV) is an ssRNA in the family Dicistroviridae that infects rice pests belonging to Hemiptera. To determine its host range, a nested PCR method was designed to detect HiPV in some of the main rice pests (Hemiptera) in eastern China. The incidence of infection in the grain aphid Sitobion avenae Fabricius (Hemiptera: Aphididae) was low (3%), while high incidences of infection occurred in the planthoppers Laodelphax striatellus (Fallén) (Hemiptera: Delphacidae) (100%) and Nilaparvata lugens (Hemiptera: Delphacidae) (51%) and in the leafhoppers Cicadella viridis (Hemiptera: Cicadellidae) (90%) and Nephotettix cincticeps (Hemiptera: Cicadellidae) (57%). Phylogenetic analysis by maximum likelihood tree and median-joining networks implied the HiPVs from the same hosts were genetically close. Neutral equilibrium evolution for the polymorphism data was tested by the Tajima's D test and by Fu and Li's D and F tests. Test values were negative, which indicates a selection on the HiPV haplotypes. We sequenced the complete genome sequence of HiPV to look for evidence of recombination. We identified a recombination event in which two genomes recombined in the region of ORF2. The two open reading frames of the HiPV had been selected with low Ka/Ks ratios compared with two previous genome sequences.


Assuntos
Dicistroviridae/genética , Dicistroviridae/isolamento & purificação , Genoma Viral , Hemípteros/virologia , Reação em Cadeia da Polimerase Via Transcriptase Reversa/métodos , Animais , Afídeos/virologia , Feminino , Especificidade de Hospedeiro , Masculino , Fases de Leitura Aberta , Filogenia
13.
Arch Virol ; 159(12): 3453-6, 2014 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-25168044

RESUMO

A novel dicistrovirus (strain NB-1/2011/HUN, KJ802403) genome was detected from guano collected from an insectivorous bat (species Pipistrellus pipistrellus) in Hungary, using viral metagenomics. The complete genome of NB-1 is 9136 nt in length, excluding the poly(A) tail. NB-1 has a genome organization typical of a dicistrovirus with multiple 3B(VPg) and a cripavirus-like intergenic region (IGR)-IRES. NB-1 shares only 41 % average amino acid sequence identity with capsid proteins of Himetobi P virus, indicating a potential novel species in the genus Cripavirus, family Dicistroviridae.


Assuntos
Quirópteros/virologia , Dicistroviridae/classificação , Dicistroviridae/genética , Fezes/virologia , Genoma Viral , RNA Viral/genética , Análise de Sequência de DNA , Animais , Análise por Conglomerados , Dicistroviridae/isolamento & purificação , Hungria , Dados de Sequência Molecular , Filogenia , Homologia de Sequência de Aminoácidos
14.
Virus Genes ; 49(1): 137-44, 2014 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-24824301

RESUMO

Kashmir bee virus (KBV) is one of the most common viral infections in honeybees. In this study, a phylogenetic analysis was performed using nine partial nucleotide sequences of RdRp and the structural polyprotein regions of South Korean KBV genotypes, as well as nine previously reported KBV genotypes from various countries and two closely related genotypes of Israeli acute paralysis virus (IAPV) and Acute bee paralysis virus (ABPV). The Korean KBV genotypes were highly conserved with 94-99 % shared identity, but they also shared 88-95 % identity with genotypes from various countries, and they formed a separate KBV cluster in the phylogenetic tree. The complete genome sequence of Korean KBV was also determined and aligned with previously reported complete reference genome sequences of KBV, IAPV, and ABPV to compare different genomic regions. The complete Korean KBV genome shared 93, 79, and 71 % similarity with the complete reference genomes of KBV, IAPV, and ABPV, respectively. The Korean KBV was highly conserved relative to the reference KBV genomes in the intergenic and 3' untranslated region (UTR), but it had a highly variable 5' UTR, whereas there was little divergence in the helicase and 3C-protease of the nonstructural protein, and the external domains of the structural polyprotein region. Thus, genetic recombination and geographical distance may explain the genomic variations between the Korean and reference KBV genotypes.


Assuntos
Abelhas/virologia , Dicistroviridae/genética , Genoma Viral , RNA Viral/genética , Análise de Sequência de DNA , Animais , Análise por Conglomerados , Dicistroviridae/isolamento & purificação , Dados de Sequência Molecular , Filogenia , Poliproteínas/genética , RNA Polimerase Dependente de RNA/genética , República da Coreia , Homologia de Sequência , Proteínas Virais/genética
15.
Microbiol Spectr ; 12(8): e0065624, 2024 Aug 06.
Artigo em Inglês | MEDLINE | ID: mdl-38980019

RESUMO

European foulbrood (EFB) is a prevalent disease in the European honey bee (Apis mellifera) in the United States, which can lead to colony decline and collapse. The bacterial components of EFB are well-studied, but the diversity of viral infections within infected colonies has not been explored. In this study, we use meta-transcriptomics sequencing of 12 honey bee hives, symptomatic (+, n = 6) and asymptomatic (-, n = 6) for EFB, to investigate viral infection associated with the disease. We assembled 41 viral genomes, belonging to three families (Iflaviridae, Dicistroviridae, and Sinhaliviridae), all previously reported in honey bees, including Lake Sinai virus, deformed wing virus, sacbrood virus, Black queen cell virus, and Israeli acute paralysis virus. In colonies with severe EFB, we observed a higher occurrence of viral genomes (34 genomes) in contrast to fewer recovered from healthy colonies (seven genomes) and a complete absence of Dicistroviridae genomes.We observed specific Lake Sinai virus clades associated exclusively with EFB + or EFB - colonies, in addition to EFB-afflicted colonies that exhibited an increase in relative abundance of sacbrood viruses. Multivariate analyses highlighted that a combination of site and EFB disease status influenced RNA virome composition, while EFB status alone did not significantly impact it, presenting a challenge for comparisons between colonies kept in different yards. These findings contribute to the understanding of viral dynamics in honey bee colonies compromised by EFB and underscore the need for future investigations to consider viral composition when investigating EFB.IMPORTANCEThis study on the viromes of honey bee colonies affected by European foulbrood (EFB) sheds light on the dynamics of viral populations in bee colonies in the context of a prevalent bacterial brood disease. The identification of distinct Lake Sinai virus and sacbrood virus clades associated with colonies affected by severe EFB suggests a potential connection between viral composition and disease status, emphasizing the need for further investigation into the role of viruses during EFB infection. The observed increase in sacbrood viruses during EFB infection suggests a potential viral dysbiosis, with potential implications for honey bee brood health. These findings contribute valuable insights related to beekeeping practices, offering a foundation for future research aimed at understanding and mitigating the impact of bacterial and viral infection in commercial honey bee operations and the management of EFB.


Assuntos
Genoma Viral , Vírus de RNA , Animais , Abelhas/virologia , Vírus de RNA/genética , Vírus de RNA/isolamento & purificação , Vírus de RNA/classificação , Filogenia , Vírus de Insetos/genética , Vírus de Insetos/classificação , Vírus de Insetos/isolamento & purificação , Dicistroviridae/genética , Dicistroviridae/isolamento & purificação , Dicistroviridae/classificação , Viroma
16.
Sci Rep ; 14(1): 9612, 2024 04 26.
Artigo em Inglês | MEDLINE | ID: mdl-38671077

RESUMO

The Carniolan honey bee (Apis mellifera carnica) plays an essential role in crop pollination, environment diversity, and the production of honey bee products. However, the health of individual honey bees and their colonies is under pressure due to multiple stressors, including viruses as a significant threat to bees. Monitoring various virus infections could be a crucial selection tool during queen rearing. In the present study, samples from all developmental stages (eggs, larvae, pupae, and queens) were screened for the incidence of seven viruses during queen rearing in Slovenia. The screening of a total of 108 samples from five queen breeders was performed by the RT-qPCR assays. The results showed that the highest incidence was observed for black queen cell virus (BQCV), Lake Sinai virus 3 (LSV3), deformed wing virus B (DWV-B), and sacbrood virus (SBV). The highest viral load was detected in queens (6.07 log10 copies/queen) and larvae (5.50 log10 copies/larva) for BQCV, followed by SBV in larvae (5.47 log10 copies/larva). When comparing all the honey bee developmental stages, the eggs exhibited general screening for virus incidence and load in queen mother colonies. The results suggest that analyzing eggs is a good indicator of resilience to virus infection during queen development.


Assuntos
Larva , Animais , Abelhas/virologia , Larva/virologia , Vírus de RNA/genética , Vírus de RNA/isolamento & purificação , Vírus de Insetos/genética , Vírus de Insetos/isolamento & purificação , Dicistroviridae/genética , Dicistroviridae/patogenicidade , Dicistroviridae/isolamento & purificação , Carga Viral , Óvulo/virologia , Feminino , Pupa/virologia , Eslovênia/epidemiologia
17.
J Virol Methods ; 328: 114953, 2024 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-38759872

RESUMO

Viruses in the families Dicistroviridae and Iflaviridae are among the main threats to western honey bees (Apis mellifera) and native bee species. Polymerase chain reaction (PCR) is the gold standard for pathogen detection in bees. However, high throughput screening for bee virus infections in singleplex PCR reactions is cumbersome and limited by the high quantities of sample RNA required. Thus, the development of a sensitive and specific multiplex PCR detection method for screening for multiple viruses simultaneously is necessary. Here, we report the development of a one-step multiplex reverse-transcription quantitative polymerase chain reaction (RT-qPCR) assay to detect four viruses commonly encountered in pollinator species. The optimized multiplex RT-qPCR protocol described in this study allows simultaneous detection of two dicistroviruses (Israeli acute paralysis virus and Black queen cell virus) and two iflaviruses (Sacbrood virus and Deformed wing virus) with high efficiency and specificity comparable to singleplex detection assays. This assay provides a broad range of detection and quantification, and the results of virus quantification in this study are similar to those performed in other studies using singleplex detection assays. This method will be particularly useful for data generation from small-bodied insect species that yield low amounts of RNA.


Assuntos
Dicistroviridae , Reação em Cadeia da Polimerase Multiplex , Vírus de RNA , Sensibilidade e Especificidade , Animais , Abelhas/virologia , Reação em Cadeia da Polimerase Multiplex/métodos , Dicistroviridae/isolamento & purificação , Dicistroviridae/genética , Vírus de RNA/genética , Vírus de RNA/isolamento & purificação , Vírus de RNA/classificação , Reação em Cadeia da Polimerase em Tempo Real/métodos , Reação em Cadeia da Polimerase Via Transcriptase Reversa/métodos , Vírus de Insetos/isolamento & purificação , Vírus de Insetos/genética , Vírus de Insetos/classificação , RNA Viral/genética , RNA Viral/isolamento & purificação
18.
Acta Trop ; 257: 107316, 2024 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-38971572

RESUMO

An epidemiological survey of honey bee viruses was conducted on 87 clinically healthy beehives located in southeastern Morocco. The sampled colonies were analyzed by reverse transcriptase (RT)-PCR / Real Time RT-qPCR with the aim of detecting and / or quantifying the following viruses: acute bee paralysis virus (ABPV), chronic bee paralysis virus (CBPV), deformed wing virus (DWV), sacbrood virus (SBV), black queen cell virus (BQCV), Kashmir bee virus (KBV) and Israeli acute paralysis virus (IAPV). With the exception of the last two of these viruses, all the other five were detected with different prevalence rates. DWV showed the highest prevalence rate (89.65 %), followed by BQCV (17.24 %), ABPV (8.04 %), CBPV (4.59 %), and SBV (2.29 %). This study represents the first molecular detection of BQCV in the country. Among all investigated colonies, only eight were virus free (9.2 %). By contrast, single infection was detected in 64.37 % of colonies, 21.8 % showed mixed infection with two viruses, while 4.6 % showed three. Nucleotide sequences of a portion of the DWV polyprotein gene obtained for six honey bee samples showed the greatest nucleotide identity with sequences of DWV from Sweden and Ireland. The negative effect of migratory beekeeping as opposed to stationary beekeeping was highlighted given that stationary beehives showed infection with up to three viruses only, while migratory beehives showed up to five viruses. The results of this study are of crucial importance as they shed light on the current status of honey bee health in southeastern Morocco.


Assuntos
Vírus de Insetos , Abelhas/virologia , Animais , Marrocos/epidemiologia , Vírus de Insetos/genética , Vírus de Insetos/isolamento & purificação , Vírus de Insetos/classificação , Vírus de RNA/genética , Vírus de RNA/isolamento & purificação , Vírus de RNA/classificação , Reação em Cadeia da Polimerase em Tempo Real , Reação em Cadeia da Polimerase Via Transcriptase Reversa , Prevalência , Dicistroviridae/genética , Dicistroviridae/isolamento & purificação , Viroses/epidemiologia , Viroses/virologia , Viroses/veterinária , Filogenia
19.
J Gen Virol ; 94(Pt 5): 1058-1068, 2013 May.
Artigo em Inglês | MEDLINE | ID: mdl-23288423

RESUMO

Triatoma virus (TrV) is a member of the insect virus family Dicistroviridae and consists of a small, non-enveloped capsid that encloses its positive-sense ssRNA genome. Using cryo-transmission electron microscopy and three-dimensional reconstruction techniques combined with fitting of the available crystallographic models, this study analysed the capsids corresponding to mature and several RNA-empty TrV particles. After genome release, the resulting reconstruction of the empty capsids displayed no prominent conformational changes with respect to the full virion capsid. The results showed that RNA delivery led to empty capsids with an apparent overall intact protein shell and suggested that, in a subsequent step, empty capsids disassemble into small symmetrical particles. Contrary to what is observed upon genome release in mammalian picornaviruses, the empty TrV capsid maintained a protein shell thickness and size identical to that in full virions.


Assuntos
Capsídeo/metabolismo , Microscopia Crioeletrônica/métodos , Dicistroviridae/ultraestrutura , Genoma Viral/genética , Triatoma/virologia , Vírion/ultraestrutura , Animais , Cristalografia , Dicistroviridae/isolamento & purificação , Dicistroviridae/fisiologia , Concentração de Íons de Hidrogênio , Imageamento Tridimensional , Insetos Vetores/virologia , Microscopia Eletrônica de Transmissão/métodos , Modelos Moleculares , Estabilidade Proteica , RNA Viral/genética , Montagem de Vírus
20.
Arch Virol ; 158(1): 77-85, 2013 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-22972680

RESUMO

vp1, a gene encoding one of the capsid proteins of Taura syndrome virus, was cloned into the pGEX-6P-1 expression vector, and the resulting construct was then used to transform E. coli strain BL21. After induction, an N-terminally glutathione-S-transferase-tagged VP1 (GST-VP1) protein with a molecular mass of 80 kDa was obtained. This protein was purified by SDS-PAGE and used for immunization of Swiss mice for monoclonal antibody (MAb) production. Three MAbs specific for the VP1 protein were selected that were suitable for detecting natural TSV infection in Penaeus vannamei by dot blotting, western blotting and immunohistochemistry. This detection occurs without cross-reaction to other shrimp tissues or other common shrimp viruses. As determined by dot blotting, the detection sensitivity of the MAbs was approximately 2 fmole/spot of the GST-VP1. These MAbs showed detection sensitivity comparable to that of MAbs specific for VP2, but they exhibited stronger immunoreactivity than previously studied MAbs specific for VP3. Although the sensitivity of the MAbs to VP1 was 1,000 times lower than one-step RT-PCR, they could be used in various types of antibody-based assays to confirm and enhance the detection sensitivity of TSV infection in shrimp.


Assuntos
Anticorpos Monoclonais/análise , Proteínas do Capsídeo/imunologia , Dicistroviridae/isolamento & purificação , Penaeidae/virologia , Animais , Anticorpos Monoclonais/imunologia , Anticorpos Antivirais/análise , Anticorpos Antivirais/imunologia , Western Blotting , Proteínas do Capsídeo/genética , Dicistroviridae/genética , Dicistroviridae/imunologia , Imuno-Histoquímica , Camundongos
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