Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity.

Song, Lingyun; Zhang, Zhancheng; Grasfeder, Linda L; Boyle, Alan P; Giresi, Paul G; Lee, Bum-Kyu; Sheffield, Nathan C; Gräf, Stefan; Huss, Mikael; Keefe, Damian; Liu, Zheng; London, Darin; McDaniell, Ryan M; Shibata, Yoichiro; Showers, Kimberly A; Simon, Jeremy M; Vales, Teresa; Wang, Tianyuan; Winter, Deborah; Zhang, Zhuzhu; Clarke, Neil D; Birney, Ewan; Iyer, Vishwanath R; Crawford, Gregory E; Lieb, Jason D; Furey, Terrence S

Song, Lingyun; Zhang, Zhancheng; Grasfeder, Linda L; Boyle, Alan P; Giresi, Paul G; Lee, Bum-Kyu; Sheffield, Nathan C; Gräf, Stefan; Huss, Mikael; Keefe, Damian; Liu, Zheng; London, Darin; McDaniell, Ryan M; Shibata, Yoichiro; Showers, Kimberly A; Simon, Jeremy M; Vales, Teresa; Wang, Tianyuan; Winter, Deborah; Zhang, Zhuzhu; Clarke, Neil D; Birney, Ewan; Iyer, Vishwanath R; Crawford, Gregory E; Lieb, Jason D; Furey, Terrence S.

Affiliation

Song L; Institute for Genome Sciences and Policy, Duke University, Durham, North Carolina 27708, USA.

Genome Res ; 21(10): 1757-67, 2011 Oct.

Article in En | MEDLINE | ID: mdl-21750106

Subject(s)

Chromatin/metabolism; Chromosome Mapping; Regulatory Elements, Transcriptional; Sequence Analysis, DNA/methods; Base Sequence; Binding Sites; CCCTC-Binding Factor; Cell Differentiation/genetics; Cell Line; Gene Expression Regulation; Humans; Protein Binding; Repressor Proteins/metabolism; Transcription, Genetic; Transcriptional Activation

Fulltext

XML

PubMed Links

Search on Google

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Chromatin / Chromosome Mapping / Sequence Analysis, DNA / Regulatory Elements, Transcriptional Type of study: Prognostic_studies Limits: Humans Language: En Journal: Genome Res Journal subject: BIOLOGIA MOLECULAR / GENETICA Year: 2011 Type: Article Affiliation country: United States

Fulltext

XML

PubMed Links

Search on Google