Inferring a weighted elastic network from partial unfolding with coarse-grained simulations.

de Mendonça, Matheus R; Rizzi, Leandro G; Contessoto, Vinicius; Leite, Vitor B P; Alves, Nelson A

de Mendonça, Matheus R; Rizzi, Leandro G; Contessoto, Vinicius; Leite, Vitor B P; Alves, Nelson A.

Affiliation

de Mendonça MR; Departamento de Física, FFCLRP, Universidade de São Paulo, Ribeirão Preto, 14040-901, SP, Brazil.

Proteins ; 82(1): 119-29, 2014 Jan.

Article in En | MEDLINE | ID: mdl-23900877

Subject(s)

Algorithms; Models, Chemical; Molecular Dynamics Simulation; Protein Folding; Proteins/chemistry; Azurin/chemistry; Cyclophilin A/chemistry; Cytochromes c/chemistry; Oligopeptides/chemistry; Plant Proteins/chemistry; Ribonucleases/chemistry; Temperature; Ubiquitin/chemistry

Key words

B-factor; GNM; WCN; normal mode analysis; pfGNM; vibrational dynamics

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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Algorithms / Proteins / Protein Folding / Molecular Dynamics Simulation / Models, Chemical Type of study: Prognostic_studies Language: En Journal: Proteins Journal subject: BIOQUIMICA Year: 2014 Type: Article Affiliation country: Brazil

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