Two Blast-independent tools, CyPerl and CyExcel, for harvesting hundreds of novel cyclotides and analogues from plant genomes and protein databases.

Zhang, Jun; Hua, Zhengshuang; Huang, Zebo; Chen, QiZhu; Long, Qingyun; Craik, David J; Baker, Alan J M; Shu, Wensheng; Liao, Bin

Zhang, Jun; Hua, Zhengshuang; Huang, Zebo; Chen, QiZhu; Long, Qingyun; Craik, David J; Baker, Alan J M; Shu, Wensheng; Liao, Bin.

Affiliation

Zhang J; School of Biosciences and Biopharmaceutics, Guangdong Province Key Laboratory for Biotechnology Drug Candidates, Guangdong Pharmaceutical University, Guangzhou, 510006, China, zhangj80@aliyun.com.

Planta ; 241(4): 929-40, 2015 Apr.

Article in En | MEDLINE | ID: mdl-25528148

Subject(s)

Cyclotides/genetics; Databases, Nucleic Acid; Databases, Protein; Genome, Plant/genetics; Magnoliopsida/genetics; Amino Acid Sequence; Magnoliopsida/metabolism; Models, Molecular; Molecular Sequence Data; Plant Proteins/genetics; Sequence Alignment; Sequence Analysis

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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Genome, Plant / Magnoliopsida / Databases, Nucleic Acid / Databases, Protein / Cyclotides Type of study: Prognostic_studies Language: En Journal: Planta Year: 2015 Type: Article

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