PASTA sequence composition is a predictive tool for protein class identification.

Calvanese, Luisa; Falcigno, Lucia; Squeglia, Flavia; Berisio, Rita; D'Auria, Gabriella

Calvanese, Luisa; Falcigno, Lucia; Squeglia, Flavia; Berisio, Rita; D'Auria, Gabriella.

Affiliation

Calvanese L; CIRPeB, University of Naples Federico II, via Mezzocannone 16, 80134, Naples, Italy.
Falcigno L; CIRPeB, University of Naples Federico II, via Mezzocannone 16, 80134, Naples, Italy.
Squeglia F; Department of Pharmacy, University of Naples Federico II, via Mezzocannone 16, 80134, Naples, Italy.
Berisio R; Institute of Bio-structures and Bio-imaging-CNR-IBB, via Mezzocannone 16, 80134, Naples, Italy.
D'Auria G; Institute of Bio-structures and Bio-imaging-CNR-IBB, via Mezzocannone 16, 80134, Naples, Italy.

Amino Acids ; 50(10): 1441-1450, 2018 Oct.

Article in En | MEDLINE | ID: mdl-30032416

Subject(s)

Bacteria/classification; Bacterial Proteins/chemistry; Bacteria/chemistry; Bacteria/genetics; Bacterial Proteins/genetics; Bacterial Proteins/metabolism; Penicillin-Binding Proteins/chemistry; Penicillin-Binding Proteins/genetics; Penicillin-Binding Proteins/metabolism; Phylogeny; Protein Domains; Protein Serine-Threonine Kinases/chemistry; Protein Serine-Threonine Kinases/genetics; Protein Serine-Threonine Kinases/metabolism

Key words

Amino acid composition; Annotation; Bacterial protein; PASTA domain

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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Bacteria / Bacterial Proteins Type of study: Diagnostic_studies / Prognostic_studies / Risk_factors_studies Language: En Journal: Amino Acids Journal subject: BIOQUIMICA Year: 2018 Type: Article Affiliation country: Italy

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