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High-performance single-cell gene regulatory network inference at scale: the Inferelator 3.0.
Skok Gibbs, Claudia; Jackson, Christopher A; Saldi, Giuseppe-Antonio; Tjärnberg, Andreas; Shah, Aashna; Watters, Aaron; De Veaux, Nicholas; Tchourine, Konstantine; Yi, Ren; Hamamsy, Tymor; Castro, Dayanne M; Carriero, Nicholas; Gorissen, Bram L; Gresham, David; Miraldi, Emily R; Bonneau, Richard.
Affiliation
  • Skok Gibbs C; Flatiron Institute, Center for Computational Biology, Simons Foundation, New York, NY 10010, USA.
  • Jackson CA; Center for Data Science, New York University, New York, NY 10003, USA.
  • Saldi GA; Center for Genomics and Systems Biology, New York University, New York, NY 10003, USA.
  • Tjärnberg A; Department of Biology, New York University, New York, NY 10003, USA.
  • Shah A; Center for Genomics and Systems Biology, New York University, New York, NY 10003, USA.
  • Watters A; Department of Biology, New York University, New York, NY 10003, USA.
  • De Veaux N; Center for Genomics and Systems Biology, New York University, New York, NY 10003, USA.
  • Tchourine K; Department of Biology, New York University, New York, NY 10003, USA.
  • Yi R; Flatiron Institute, Center for Computational Biology, Simons Foundation, New York, NY 10010, USA.
  • Hamamsy T; Flatiron Institute, Center for Computational Biology, Simons Foundation, New York, NY 10010, USA.
  • Castro DM; Flatiron Institute, Center for Computational Biology, Simons Foundation, New York, NY 10010, USA.
  • Carriero N; Department of Systems Biology, Columbia University, New York, NY 10027, USA.
  • Gorissen BL; Computer Science Department, Courant Institute of Mathematical Sciences, New York University, New York, NY 10012, USA.
  • Gresham D; Center for Data Science, New York University, New York, NY 10003, USA.
  • Miraldi ER; Center for Genomics and Systems Biology, New York University, New York, NY 10003, USA.
  • Bonneau R; Department of Biology, New York University, New York, NY 10003, USA.
Bioinformatics ; 38(9): 2519-2528, 2022 04 28.
Article in En | MEDLINE | ID: mdl-35188184
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Software / Gene Regulatory Networks Limits: Animals Language: En Journal: Bioinformatics Journal subject: INFORMATICA MEDICA Year: 2022 Type: Article Affiliation country: United States
Fulltext
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Software / Gene Regulatory Networks Limits: Animals Language: En Journal: Bioinformatics Journal subject: INFORMATICA MEDICA Year: 2022 Type: Article Affiliation country: United States