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DestVI identifies continuums of cell types in spatial transcriptomics data.
Lopez, Romain; Li, Baoguo; Keren-Shaul, Hadas; Boyeau, Pierre; Kedmi, Merav; Pilzer, David; Jelinski, Adam; Yofe, Ido; David, Eyal; Wagner, Allon; Ergen, Can; Addadi, Yoseph; Golani, Ofra; Ronchese, Franca; Jordan, Michael I; Amit, Ido; Yosef, Nir.
Affiliation
  • Lopez R; Department of Electrical Engineering and Computer Sciences, University of California, Berkeley, Berkeley CA, USA.
  • Li B; Department of Immunology, Weizmann Institute of Science, Rehovot, Israel.
  • Keren-Shaul H; Department of Life Sciences Core Facilities, Weizmann Institute of Science, Rehovot, Israel.
  • Boyeau P; Department of Electrical Engineering and Computer Sciences, University of California, Berkeley, Berkeley CA, USA.
  • Kedmi M; Department of Life Sciences Core Facilities, Weizmann Institute of Science, Rehovot, Israel.
  • Pilzer D; Department of Life Sciences Core Facilities, Weizmann Institute of Science, Rehovot, Israel.
  • Jelinski A; Department of Immunology, Weizmann Institute of Science, Rehovot, Israel.
  • Yofe I; Department of Immunology, Weizmann Institute of Science, Rehovot, Israel.
  • David E; Department of Immunology, Weizmann Institute of Science, Rehovot, Israel.
  • Wagner A; Department of Electrical Engineering and Computer Sciences, University of California, Berkeley, Berkeley CA, USA.
  • Ergen C; Department of Electrical Engineering and Computer Sciences, University of California, Berkeley, Berkeley CA, USA.
  • Addadi Y; Department of Life Sciences Core Facilities, Weizmann Institute of Science, Rehovot, Israel.
  • Golani O; Department of Life Sciences Core Facilities, Weizmann Institute of Science, Rehovot, Israel.
  • Ronchese F; Malaghan Institute of Medical Research, Wellington, New Zealand.
  • Jordan MI; Department of Immunology, Weizmann Institute of Science, Rehovot, Israel.
  • Amit I; Department of Statistics, University of California, Berkeley, Berkeley CA, USA.
  • Yosef N; Department of Immunology, Weizmann Institute of Science, Rehovot, Israel. ido.amit@weizmann.ac.il.
Nat Biotechnol ; 40(9): 1360-1369, 2022 09.
Article in En | MEDLINE | ID: mdl-35449415
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Transcriptome / Neoplasms Limits: Animals Language: En Journal: Nat Biotechnol Journal subject: BIOTECNOLOGIA Year: 2022 Type: Article Affiliation country: United States
Fulltext
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PubMed Links
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Transcriptome / Neoplasms Limits: Animals Language: En Journal: Nat Biotechnol Journal subject: BIOTECNOLOGIA Year: 2022 Type: Article Affiliation country: United States