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Efficient mapping of accurate long reads in minimizer space with mapquik.
Ekim, Baris; Sahlin, Kristoffer; Medvedev, Paul; Berger, Bonnie; Chikhi, Rayan.
Affiliation
  • Ekim B; Computer Science and Artificial Intelligence Laboratory (CSAIL), Massachusetts Institute of Technology (MIT), Cambridge, Massachusetts 02139, USA.
  • Sahlin K; Department of Mathematics, Massachusetts Institute of Technology (MIT), Cambridge, Massachusetts 02139, USA.
  • Medvedev P; Department of Mathematics, Science for Life Laboratory, Stockholm University, SE-106 91 Stockholm, Sweden.
  • Berger B; Department of Computer Science and Engineering, The Pennsylvania State University, University Park, Pennsylvania 16802, USA.
  • Chikhi R; Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, Pennsylvania 16802, USA.
Genome Res ; 33(7): 1188-1197, 2023 07.
Article in En | MEDLINE | ID: mdl-37399256
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Software / High-Throughput Nucleotide Sequencing Limits: Humans Language: En Journal: Genome Res Journal subject: BIOLOGIA MOLECULAR / GENETICA Year: 2023 Type: Article Affiliation country: United States
Fulltext
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PubMed Links
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Software / High-Throughput Nucleotide Sequencing Limits: Humans Language: En Journal: Genome Res Journal subject: BIOLOGIA MOLECULAR / GENETICA Year: 2023 Type: Article Affiliation country: United States