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Reproducibility of arterial spin labeling cerebral blood flow image processing: A report of the ISMRM open science initiative for perfusion imaging (OSIPI) and the ASL MRI challenge.
Paschoal, Andre M; Woods, Joseph G; Pinto, Joana; Bron, Esther E; Petr, Jan; Kennedy McConnell, Flora A; Bell, Laura; Dounavi, Maria-Eleni; van Praag, Cassandra Gould; Mutsaerts, Henk J M M; Taylor, Aaron Oliver; Zhao, Moss Y; Brumer, Irène; Chan, Wei Siang Marcus; Toner, Jack; Hu, Jian; Zhang, Logan X; Domingos, Catarina; Monteiro, Sara P; Figueiredo, Patrícia; Harms, Alexander G J; Padrela, Beatriz E; Tham, Channelle; Abdalle, Ahmed; Croal, Paula L; Anazodo, Udunna.
Affiliation
  • Paschoal AM; Institute of Physics, University of Campinas, Campinas, Brazil.
  • Woods JG; LIM44, Institute of Radiology, Department of Radiology and Oncology of Clinical Hospital, University of Sao Paulo, Sao Paulo, Brazil.
  • Pinto J; Wellcome Centre for Integrative Neuroimaging, University of Oxford, Oxford, UK.
  • Bron EE; Department of Radiology, Center for Functional Magnetic Resonance Imaging, University of California, San Diego, La Jolla, California, USA.
  • Petr J; Institute of Biomedical Engineering, Department of Engineering Science, University of Oxford, Oxford, UK.
  • Kennedy McConnell FA; Department of Radiology & Nuclear Medicine, Erasmus MC-University Medical Center Rotterdam, Rotterdam, the Netherlands.
  • Bell L; Helmholtz-Zentrum Dresden-Rossendorf, Institute of Radiopharmaceutical Cancer Research, Dresden, Germany.
  • Dounavi ME; Radiological Sciences, Division of Clinical Neuroscience, School of Medicine, University of Nottingham, Nottingham, UK.
  • van Praag CG; Sir Peter Mansfield Imaging Centre, School of Medicine, University of Nottingham, Nottingham, UK.
  • Mutsaerts HJMM; Nottingham Biomedical Research Centre, Queens Medical Centre, Nottingham, UK.
  • Taylor AO; Clinical Imaging Group, Genentech, Inc., South San Francisco, California, USA.
  • Zhao MY; Department of Psychiatry, University of Cambridge, Cambridge, UK.
  • Brumer I; Wellcome Centre for Integrative Neuroimaging, University of Oxford, Oxford, UK.
  • Chan WSM; Department of Psychiatry, University of Oxford, Oxford, UK.
  • Toner J; Department of Radiology and Nuclear Medicine, Vrije Universiteit Amsterdam, Amsterdam UMC Location VUmc, Amsterdam, the Netherlands.
  • Hu J; Amsterdam Neuroscience, Brain Imaging, Amsterdam, the Netherlands.
  • Zhang LX; Gold Standard Phantoms Limited, London, UK.
  • Domingos C; Department of Radiology, Stanford University, Stanford, California, USA.
  • Monteiro SP; Computer Assisted Clinical Medicine, Mannheim Institute for Intelligent Systems in Medicine, Medical Faculty Mannheim, Heidelberg University, Heidelberg, Germany.
  • Figueiredo P; Computer Assisted Clinical Medicine, Mannheim Institute for Intelligent Systems in Medicine, Medical Faculty Mannheim, Heidelberg University, Heidelberg, Germany.
  • Harms AGJ; Sir Peter Mansfield Imaging Centre, School of Medicine, University of Nottingham, Nottingham, UK.
  • Padrela BE; Mental Health & Clinical Neurosciences, School of Medicine, University of Nottingham, Nottingham, UK.
  • Tham C; Sir Peter Mansfield Imaging Centre, School of Medicine, University of Nottingham, Nottingham, UK.
  • Abdalle A; Mental Health & Clinical Neurosciences, School of Medicine, University of Nottingham, Nottingham, UK.
  • Croal PL; Institute of Biomedical Engineering, Department of Engineering Science, University of Oxford, Oxford, UK.
  • Anazodo U; Institute for Systems and Robotics-Lisboa and Department of Bioengineering, Instituto Superior Técnico-Universidade de Lisboa, Lisbon, Portugal.
Magn Reson Med ; 92(2): 836-852, 2024 Aug.
Article in En | MEDLINE | ID: mdl-38502108
ABSTRACT

PURPOSE:

Arterial spin labeling (ASL) is a widely used contrast-free MRI method for assessing cerebral blood flow (CBF). Despite the generally adopted ASL acquisition guidelines, there is still wide variability in ASL analysis. We explored this variability through the ISMRM-OSIPI ASL-MRI Challenge, aiming to establish best practices for more reproducible ASL analysis.

METHODS:

Eight teams analyzed the challenge data, which included a high-resolution T1-weighted anatomical image and 10 pseudo-continuous ASL datasets simulated using a digital reference object to generate ground-truth CBF values in normal and pathological states. We compared the accuracy of CBF quantification from each team's analysis to the ground truth across all voxels and within predefined brain regions. Reproducibility of CBF across analysis pipelines was assessed using the intra-class correlation coefficient (ICC), limits of agreement (LOA), and replicability of generating similar CBF estimates from different processing approaches.

RESULTS:

Absolute errors in CBF estimates compared to ground-truth synthetic data ranged from 18.36 to 48.12 mL/100 g/min. Realistic motion incorporated into three datasets produced the largest absolute error and variability between teams, with the least agreement (ICC and LOA) with ground-truth results. Fifty percent of the submissions were replicated, and one produced three times larger CBF errors (46.59 mL/100 g/min) compared to submitted results.

CONCLUSIONS:

Variability in CBF measurements, influenced by differences in image processing, especially to compensate for motion, highlights the significance of standardizing ASL analysis workflows. We provide a recommendation for ASL processing based on top-performing approaches as a step toward ASL standardization.
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Spin Labels / Image Processing, Computer-Assisted / Brain / Magnetic Resonance Imaging / Cerebrovascular Circulation Limits: Adult / Female / Humans / Male Language: En Journal: Magn Reson Med Journal subject: DIAGNOSTICO POR IMAGEM Year: 2024 Type: Article Affiliation country: Brazil

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Spin Labels / Image Processing, Computer-Assisted / Brain / Magnetic Resonance Imaging / Cerebrovascular Circulation Limits: Adult / Female / Humans / Male Language: En Journal: Magn Reson Med Journal subject: DIAGNOSTICO POR IMAGEM Year: 2024 Type: Article Affiliation country: Brazil