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Exploring the complementarity of fast multipulse and multidimensional NMR methods for metabolomics: a chemical ecology case study.
Michaud, Aurore; Bertrand, Samuel; Akoka, Serge; Farjon, Jonathan; Martineau, Estelle; Ruiz, Nicolas; Robiou du Pont, Thibaut; Grovel, Olivier; Giraudeau, Patrick.
Affiliation
  • Michaud A; Nantes Université, CNRS, CEISAM, UMR 6230, F-44000 Nantes, France. patrick.giraudeau@univ-nantes.fr.
  • Bertrand S; Nantes Université, Institut des Substances et Organismes de la Mer, ISOMer, UR 2160, F-44000 Nantes, France. olivier.grovel@univ-nantes.fr.
  • Akoka S; Nantes Université, Institut des Substances et Organismes de la Mer, ISOMer, UR 2160, F-44000 Nantes, France. olivier.grovel@univ-nantes.fr.
  • Farjon J; Nantes Université, École Centrale Nantes, CNRS, LS2N, UMR 6004, F-44000 Nantes, France.
  • Martineau E; Nantes Université, CNRS, CEISAM, UMR 6230, F-44000 Nantes, France. patrick.giraudeau@univ-nantes.fr.
  • Ruiz N; Nantes Université, CNRS, CEISAM, UMR 6230, F-44000 Nantes, France. patrick.giraudeau@univ-nantes.fr.
  • Robiou du Pont T; Nantes Université, CNRS, CEISAM, UMR 6230, F-44000 Nantes, France. patrick.giraudeau@univ-nantes.fr.
  • Grovel O; Nantes Université, Institut des Substances et Organismes de la Mer, ISOMer, UR 2160, F-44000 Nantes, France. olivier.grovel@univ-nantes.fr.
  • Giraudeau P; Nantes Université, Institut des Substances et Organismes de la Mer, ISOMer, UR 2160, F-44000 Nantes, France. olivier.grovel@univ-nantes.fr.
Anal Methods ; 16(30): 5166-5177, 2024 Aug 01.
Article in En | MEDLINE | ID: mdl-39028155
ABSTRACT
This study investigates the potential and complementarity of high-throughput multipulse and multidimensional NMR methods for metabolomics. Through a chemical ecology case study, three methods are investigated, offering a continuum of methods with complementary features in terms of resolution, sensitivity and experiment time. Ultrafast 2D COSY, adiabatic INEPT and SYMAPS HSQC are shown to provide a very good classification ability, comparable to the reference 1D 1H NMR method. Moreover, a detailed analysis of discriminant buckets upon supervised statistical analysis shows that all methods are highly complementary, since they are able to highlight discriminant signals that could not be detected by 1D 1H NMR. In particular, fast 2D methods appear very efficient to discriminate signals located in highly crowded regions of the 1H spectrum. Overall, the combination of these recent methods within a single NMR metabolomics workflow allows to maximize the accessible metabolic information, and also raises exciting challenges in terms of NMR data analysis for chemical ecology.
Subject(s)

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Magnetic Resonance Spectroscopy / Metabolomics Language: En Journal: Anal Methods Year: 2024 Type: Article Affiliation country: France

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Magnetic Resonance Spectroscopy / Metabolomics Language: En Journal: Anal Methods Year: 2024 Type: Article Affiliation country: France