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ENCODE data at the ENCODE portal.
Sloan, Cricket A; Chan, Esther T; Davidson, Jean M; Malladi, Venkat S; Strattan, J Seth; Hitz, Benjamin C; Gabdank, Idan; Narayanan, Aditi K; Ho, Marcus; Lee, Brian T; Rowe, Laurence D; Dreszer, Timothy R; Roe, Greg; Podduturi, Nikhil R; Tanaka, Forrest; Hong, Eurie L; Cherry, J Michael.
Afiliación
  • Sloan CA; Stanford University School of Medicine, Department of Genetics, Stanford, CA, 94305, USA.
  • Chan ET; Stanford University School of Medicine, Department of Genetics, Stanford, CA, 94305, USA.
  • Davidson JM; Stanford University School of Medicine, Department of Genetics, Stanford, CA, 94305, USA.
  • Malladi VS; Stanford University School of Medicine, Department of Genetics, Stanford, CA, 94305, USA.
  • Strattan JS; Stanford University School of Medicine, Department of Genetics, Stanford, CA, 94305, USA.
  • Hitz BC; Stanford University School of Medicine, Department of Genetics, Stanford, CA, 94305, USA.
  • Gabdank I; Stanford University School of Medicine, Department of Genetics, Stanford, CA, 94305, USA.
  • Narayanan AK; Stanford University School of Medicine, Department of Genetics, Stanford, CA, 94305, USA.
  • Ho M; Stanford University School of Medicine, Department of Genetics, Stanford, CA, 94305, USA.
  • Lee BT; University of California at Santa Cruz, Center for Biomolecular Science and Engineering, Santa Cruz, CA, 95064, USA.
  • Rowe LD; Stanford University School of Medicine, Department of Genetics, Stanford, CA, 94305, USA.
  • Dreszer TR; Stanford University School of Medicine, Department of Genetics, Stanford, CA, 94305, USA.
  • Roe G; Stanford University School of Medicine, Department of Genetics, Stanford, CA, 94305, USA.
  • Podduturi NR; Stanford University School of Medicine, Department of Genetics, Stanford, CA, 94305, USA.
  • Tanaka F; Stanford University School of Medicine, Department of Genetics, Stanford, CA, 94305, USA.
  • Hong EL; Stanford University School of Medicine, Department of Genetics, Stanford, CA, 94305, USA.
  • Cherry JM; Stanford University School of Medicine, Department of Genetics, Stanford, CA, 94305, USA cherry@stanford.edu.
Nucleic Acids Res ; 44(D1): D726-32, 2016 Jan 04.
Article en En | MEDLINE | ID: mdl-26527727
ABSTRACT
The Encyclopedia of DNA Elements (ENCODE) Project is in its third phase of creating a comprehensive catalog of functional elements in the human genome. This phase of the project includes an expansion of assays that measure diverse RNA populations, identify proteins that interact with RNA and DNA, probe regions of DNA hypersensitivity, and measure levels of DNA methylation in a wide range of cell and tissue types to identify putative regulatory elements. To date, results for almost 5000 experiments have been released for use by the scientific community. These data are available for searching, visualization and download at the new ENCODE Portal (www.encodeproject.org). The revamped ENCODE Portal provides new ways to browse and search the ENCODE data based on the metadata that describe the assays as well as summaries of the assays that focus on data provenance. In addition, it is a flexible platform that allows integration of genomic data from multiple projects. The portal experience was designed to improve access to ENCODE data by relying on metadata that allow reusability and reproducibility of the experiments.
Asunto(s)

Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Genoma Humano / Genómica / Bases de Datos Genéticas Límite: Animals / Humans Idioma: En Revista: Nucleic Acids Res Año: 2016 Tipo del documento: Article País de afiliación: Estados Unidos

Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Genoma Humano / Genómica / Bases de Datos Genéticas Límite: Animals / Humans Idioma: En Revista: Nucleic Acids Res Año: 2016 Tipo del documento: Article País de afiliación: Estados Unidos