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Criticality and Adaptivity in Enzymatic Networks.
Steiner, Paul J; Williams, Ruth J; Hasty, Jeff; Tsimring, Lev S.
Afiliación
  • Steiner PJ; BioCircuits Institute, University of California, San Diego, La Jolla, California.
  • Williams RJ; BioCircuits Institute, University of California, San Diego, La Jolla, California; Department of Mathematics, University of California, San Diego, La Jolla, California. Electronic address: williams@math.ucsd.edu.
  • Hasty J; BioCircuits Institute, University of California, San Diego, La Jolla, California; Molecular Biology Section, Division of Biological Sciences, University of California, San Diego, La Jolla, California; Department of Bioengineering, University of California, San Diego, La Jolla, California; San Diego
  • Tsimring LS; BioCircuits Institute, University of California, San Diego, La Jolla, California; San Diego Center for Systems Biology, University of California, San Diego, La Jolla, California. Electronic address: ltsimring@ucsd.edu.
Biophys J ; 111(5): 1078-87, 2016 Sep 06.
Article en En | MEDLINE | ID: mdl-27602735
ABSTRACT
The contrast between the stochasticity of biochemical networks and the regularity of cellular behavior suggests that biological networks generate robust behavior from noisy constituents. Identifying the mechanisms that confer this ability on biological networks is essential to understanding cells. Here we show that queueing for a limited shared resource in broad classes of enzymatic networks in certain conditions leads to a critical state characterized by strong and long-ranged correlations between molecular species. An enzymatic network reaches this critical state when the input flux of its substrate is balanced by the maximum processing capacity of the network. We then consider enzymatic networks with adaptation, when the limiting resource (enzyme or cofactor) is produced in proportion to the demand for it. We show that the critical state becomes an attractor for these networks, which points toward the onset of self-organized criticality. We suggest that the adaptive queueing motif that leads to significant correlations between multiple species may be widespread in biological systems.
Asunto(s)

Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Modelos Moleculares / Enzimas Idioma: En Revista: Biophys J Año: 2016 Tipo del documento: Article

Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Modelos Moleculares / Enzimas Idioma: En Revista: Biophys J Año: 2016 Tipo del documento: Article