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Creation and analysis of biochemical constraint-based models using the COBRA Toolbox v.3.0.
Heirendt, Laurent; Arreckx, Sylvain; Pfau, Thomas; Mendoza, Sebastián N; Richelle, Anne; Heinken, Almut; Haraldsdóttir, Hulda S; Wachowiak, Jacek; Keating, Sarah M; Vlasov, Vanja; Magnusdóttir, Stefania; Ng, Chiam Yu; Preciat, German; Zagare, Alise; Chan, Siu H J; Aurich, Maike K; Clancy, Catherine M; Modamio, Jennifer; Sauls, John T; Noronha, Alberto; Bordbar, Aarash; Cousins, Benjamin; El Assal, Diana C; Valcarcel, Luis V; Apaolaza, Iñigo; Ghaderi, Susan; Ahookhosh, Masoud; Ben Guebila, Marouen; Kostromins, Andrejs; Sompairac, Nicolas; Le, Hoai M; Ma, Ding; Sun, Yuekai; Wang, Lin; Yurkovich, James T; Oliveira, Miguel A P; Vuong, Phan T; El Assal, Lemmer P; Kuperstein, Inna; Zinovyev, Andrei; Hinton, H Scott; Bryant, William A; Aragón Artacho, Francisco J; Planes, Francisco J; Stalidzans, Egils; Maass, Alejandro; Vempala, Santosh; Hucka, Michael; Saunders, Michael A; Maranas, Costas D.
Afiliación
  • Heirendt L; Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Belvaux, Luxembourg.
  • Arreckx S; Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Belvaux, Luxembourg.
  • Pfau T; Life Sciences Research Unit, University of Luxembourg, Belvaux, Luxembourg.
  • Mendoza SN; Center for Genome Regulation (Fondap 15090007), University of Chile, Santiago, Chile.
  • Richelle A; Mathomics, Center for Mathematical Modeling, University of Chile, Santiago, Chile.
  • Heinken A; Department of Pediatrics, University of California, San Diego, School of Medicine, La Jolla, CA, USA.
  • Haraldsdóttir HS; Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Belvaux, Luxembourg.
  • Wachowiak J; Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Belvaux, Luxembourg.
  • Keating SM; Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Belvaux, Luxembourg.
  • Vlasov V; European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Hinxton, Cambridge, UK.
  • Magnusdóttir S; Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Belvaux, Luxembourg.
  • Ng CY; Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Belvaux, Luxembourg.
  • Preciat G; Department of Chemical Engineering, The Pennsylvania State University, State College, PA, USA.
  • Zagare A; Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Belvaux, Luxembourg.
  • Chan SHJ; Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Belvaux, Luxembourg.
  • Aurich MK; Department of Chemical Engineering, The Pennsylvania State University, State College, PA, USA.
  • Clancy CM; Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Belvaux, Luxembourg.
  • Modamio J; Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Belvaux, Luxembourg.
  • Sauls JT; Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Belvaux, Luxembourg.
  • Noronha A; Department of Physics, and Bioinformatics and Systems Biology Program, University of California, San Diego, La Jolla, CA, USA.
  • Bordbar A; Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Belvaux, Luxembourg.
  • Cousins B; Sinopia Biosciences, San Diego, CA, USA.
  • El Assal DC; Algorithms and Randomness Center, School of Computer Science, Georgia Institute of Technology, Atlanta, GA, USA.
  • Valcarcel LV; Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Belvaux, Luxembourg.
  • Apaolaza I; Biomedical Engineering and Sciences Department, TECNUN, University of Navarra, San Sebastián, Spain.
  • Ghaderi S; Biomedical Engineering and Sciences Department, TECNUN, University of Navarra, San Sebastián, Spain.
  • Ahookhosh M; Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Belvaux, Luxembourg.
  • Ben Guebila M; Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Belvaux, Luxembourg.
  • Kostromins A; Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Belvaux, Luxembourg.
  • Sompairac N; Institute of Microbiology and Biotechnology, University of Latvia, Riga, Latvia.
  • Le HM; Institut Curie, PSL Research University, Mines Paris Tech, Inserm, U900, Paris, France.
  • Ma D; Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Belvaux, Luxembourg.
  • Sun Y; Department of Management Science and Engineering, Stanford University, Stanford, CA, USA.
  • Wang L; Department of Statistics, University of Michigan, Ann Arbor, MI, USA.
  • Yurkovich JT; Department of Chemical Engineering, The Pennsylvania State University, State College, PA, USA.
  • Oliveira MAP; Department of Bioengineering, University of California, San Diego, La Jolla, CA, USA.
  • Vuong PT; Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Belvaux, Luxembourg.
  • El Assal LP; Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Belvaux, Luxembourg.
  • Kuperstein I; Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Belvaux, Luxembourg.
  • Zinovyev A; Institut Curie, PSL Research University, Mines Paris Tech, Inserm, U900, Paris, France.
  • Hinton HS; Institut Curie, PSL Research University, Mines Paris Tech, Inserm, U900, Paris, France.
  • Bryant WA; Utah State University Research Foundation, North Logan, UT, USA.
  • Aragón Artacho FJ; Centre for Integrative Systems Biology and Bioinformatics, Department of Life Sciences, Imperial College London, London, UK.
  • Planes FJ; Department of Mathematics, University of Alicante, Alicante, Spain.
  • Stalidzans E; Biomedical Engineering and Sciences Department, TECNUN, University of Navarra, San Sebastián, Spain.
  • Maass A; Institute of Microbiology and Biotechnology, University of Latvia, Riga, Latvia.
  • Vempala S; Center for Genome Regulation (Fondap 15090007), University of Chile, Santiago, Chile.
  • Hucka M; Mathomics, Center for Mathematical Modeling, University of Chile, Santiago, Chile.
  • Saunders MA; Algorithms and Randomness Center, School of Computer Science, Georgia Institute of Technology, Atlanta, GA, USA.
  • Maranas CD; Department of Computing and Mathematical Sciences, California Institute of Technology, Pasadena, CA, USA.
Nat Protoc ; 14(3): 639-702, 2019 03.
Article en En | MEDLINE | ID: mdl-30787451
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Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Programas Informáticos / Modelos Biológicos Tipo de estudio: Prognostic_studies Idioma: En Revista: Nat Protoc Año: 2019 Tipo del documento: Article País de afiliación: Luxemburgo
Texto completo
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Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Programas Informáticos / Modelos Biológicos Tipo de estudio: Prognostic_studies Idioma: En Revista: Nat Protoc Año: 2019 Tipo del documento: Article País de afiliación: Luxemburgo