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Optimizing sequencing protocols for leaderboard metagenomics by combining long and short reads.
Sanders, Jon G; Nurk, Sergey; Salido, Rodolfo A; Minich, Jeremiah; Xu, Zhenjiang Z; Zhu, Qiyun; Martino, Cameron; Fedarko, Marcus; Arthur, Timothy D; Chen, Feng; Boland, Brigid S; Humphrey, Greg C; Brennan, Caitriona; Sanders, Karenina; Gaffney, James; Jepsen, Kristen; Khosroheidari, Mahdieh; Green, Cliff; Liyanage, Marlon; Dang, Jason W; Phelan, Vanessa V; Quinn, Robert A; Bankevich, Anton; Chang, John T; Rana, Tariq M; Conrad, Douglas J; Sandborn, William J; Smarr, Larry; Dorrestein, Pieter C; Pevzner, Pavel A; Knight, Rob.
Afiliación
  • Sanders JG; Department of Pediatrics, University of California San Diego School of Medicine, La Jolla, CA, 92093, USA.
  • Nurk S; Center for Algorithmic Biotechnology, Institute for Translational Biomedicine, St. Petersburg State University, St. Petersburg, Russia.
  • Salido RA; Department of Pediatrics, University of California San Diego School of Medicine, La Jolla, CA, 92093, USA.
  • Minich J; Department of Pediatrics, University of California San Diego School of Medicine, La Jolla, CA, 92093, USA.
  • Xu ZZ; Department of Pediatrics, University of California San Diego School of Medicine, La Jolla, CA, 92093, USA.
  • Zhu Q; Department of Pediatrics, University of California San Diego School of Medicine, La Jolla, CA, 92093, USA.
  • Martino C; Department of Pediatrics, University of California San Diego School of Medicine, La Jolla, CA, 92093, USA.
  • Fedarko M; Bioinformatics and Systems Biology Program, University of California San Diego, La Jolla, CA, USA.
  • Arthur TD; Department of Computer Science and Engineering, University of California San Diego, La Jolla, CA, USA.
  • Chen F; Department of Pediatrics, University of California San Diego School of Medicine, La Jolla, CA, 92093, USA.
  • Boland BS; Illumina, Inc., La Jolla, CA, USA.
  • Humphrey GC; Division of Gastroenterology, Department of Medicine, University of California San Diego, La Jolla, CA, USA.
  • Brennan C; Inflammatory Bowel Disease Center, University of California San Diego, La Jolla, CA, USA.
  • Sanders K; Department of Pediatrics, University of California San Diego School of Medicine, La Jolla, CA, 92093, USA.
  • Gaffney J; Department of Pediatrics, University of California San Diego School of Medicine, La Jolla, CA, 92093, USA.
  • Jepsen K; Department of Pediatrics, University of California San Diego School of Medicine, La Jolla, CA, 92093, USA.
  • Khosroheidari M; Department of Pediatrics, University of California San Diego School of Medicine, La Jolla, CA, 92093, USA.
  • Green C; Institute for Genomic Medicine, University of California San Diego, La Jolla, CA, USA.
  • Liyanage M; Institute for Genomic Medicine, University of California San Diego, La Jolla, CA, USA.
  • Dang JW; Institute for Genomic Medicine, University of California San Diego, La Jolla, CA, USA.
  • Phelan VV; Department of Pediatrics, University of California San Diego School of Medicine, La Jolla, CA, 92093, USA.
  • Quinn RA; Department of Pediatrics, University of California San Diego School of Medicine, La Jolla, CA, 92093, USA.
  • Bankevich A; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, CA, USA.
  • Chang JT; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of Colorado, Aurora, CO, USA.
  • Rana TM; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, CA, USA.
  • Conrad DJ; Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, MI, USA.
  • Sandborn WJ; Center for Algorithmic Biotechnology, Institute for Translational Biomedicine, St. Petersburg State University, St. Petersburg, Russia.
  • Smarr L; Division of Gastroenterology, Department of Medicine, University of California San Diego, La Jolla, CA, USA.
  • Dorrestein PC; Inflammatory Bowel Disease Center, University of California San Diego, La Jolla, CA, USA.
  • Pevzner PA; Department of Pediatrics, University of California San Diego School of Medicine, La Jolla, CA, 92093, USA.
  • Knight R; Division of Pulmonary, Critical Care and Sleep Medicine, Department of Medicine, University of California San Diego, 9500 Gilman Drive, La Jolla, CA, 92093, USA.
Genome Biol ; 20(1): 226, 2019 10 31.
Article en En | MEDLINE | ID: mdl-31672156
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Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Biblioteca Genómica / Metagenómica / Secuenciación de Nucleótidos de Alto Rendimiento Límite: Animals / Humans Idioma: En Revista: Genome Biol Asunto de la revista: BIOLOGIA MOLECULAR / GENETICA Año: 2019 Tipo del documento: Article País de afiliación: Estados Unidos
Texto completo
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Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Biblioteca Genómica / Metagenómica / Secuenciación de Nucleótidos de Alto Rendimiento Límite: Animals / Humans Idioma: En Revista: Genome Biol Asunto de la revista: BIOLOGIA MOLECULAR / GENETICA Año: 2019 Tipo del documento: Article País de afiliación: Estados Unidos