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ELM-the eukaryotic linear motif resource in 2020.
Kumar, Manjeet; Gouw, Marc; Michael, Sushama; Sámano-Sánchez, Hugo; Pancsa, Rita; Glavina, Juliana; Diakogianni, Athina; Valverde, Jesús Alvarado; Bukirova, Dayana; Calyseva, Jelena; Palopoli, Nicolas; Davey, Norman E; Chemes, Lucía B; Gibson, Toby J.
Afiliación
  • Kumar M; Structural and Computational Biology Unit, European Molecular Biology Laboratory, Heidelberg 69117, Germany.
  • Gouw M; Structural and Computational Biology Unit, European Molecular Biology Laboratory, Heidelberg 69117, Germany.
  • Michael S; Structural and Computational Biology Unit, European Molecular Biology Laboratory, Heidelberg 69117, Germany.
  • Sámano-Sánchez H; Structural and Computational Biology Unit, European Molecular Biology Laboratory, Heidelberg 69117, Germany.
  • Pancsa R; Collaboration for Joint PhD Degree between EMBL and Heidelberg University, Faculty of Biosciences.
  • Glavina J; Institute of Enzymology, Research Centre for Natural Sciences, Budapest 1117, Hungary.
  • Diakogianni A; Instituto de Investigaciones Biotecnológicas (IIBio) and Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Universidad Nacional de San Martín. Av. 25 de Mayo y Francia, CP1650, Buenos Aires, Argentina.
  • Valverde JA; Structural and Computational Biology Unit, European Molecular Biology Laboratory, Heidelberg 69117, Germany.
  • Bukirova D; Structural and Computational Biology Unit, European Molecular Biology Laboratory, Heidelberg 69117, Germany.
  • Calyseva J; Structural and Computational Biology Unit, European Molecular Biology Laboratory, Heidelberg 69117, Germany.
  • Palopoli N; Nazarbayev University, Nur-Sultan 010000, Kazakhstan.
  • Davey NE; Structural and Computational Biology Unit, European Molecular Biology Laboratory, Heidelberg 69117, Germany.
  • Chemes LB; Collaboration for Joint PhD Degree between EMBL and Heidelberg University, Faculty of Biosciences.
  • Gibson TJ; Department of Science and Technology, Universidad Nacional de Quilmes - CONICET, Bernal B1876BXD, Buenos Aires, Argentina.
Nucleic Acids Res ; 48(D1): D296-D306, 2020 01 08.
Article en En | MEDLINE | ID: mdl-31680160
ABSTRACT
The eukaryotic linear motif (ELM) resource is a repository of manually curated experimentally validated short linear motifs (SLiMs). Since the initial release almost 20 years ago, ELM has become an indispensable resource for the molecular biology community for investigating functional regions in many proteins. In this update, we have added 21 novel motif classes, made major revisions to 12 motif classes and added >400 new instances mostly focused on DNA damage, the cytoskeleton, SH2-binding phosphotyrosine motifs and motif mimicry by pathogenic bacterial effector proteins. The current release of the ELM database contains 289 motif classes and 3523 individual protein motif instances manually curated from 3467 scientific publications. ELM is available at http//elm.eu.org.
Asunto(s)

Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Secuencias de Aminoácidos / Eucariontes Idioma: En Revista: Nucleic Acids Res Año: 2020 Tipo del documento: Article País de afiliación: Alemania

Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Secuencias de Aminoácidos / Eucariontes Idioma: En Revista: Nucleic Acids Res Año: 2020 Tipo del documento: Article País de afiliación: Alemania