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Diverse Asgard archaea including the novel phylum Gerdarchaeota participate in organic matter degradation.
Cai, Mingwei; Liu, Yang; Yin, Xiuran; Zhou, Zhichao; Friedrich, Michael W; Richter-Heitmann, Tim; Nimzyk, Rolf; Kulkarni, Ajinkya; Wang, Xiaowen; Li, Wenjin; Pan, Jie; Yang, Yuchun; Gu, Ji-Dong; Li, Meng.
Afiliación
  • Cai M; Shenzhen Key Laboratory of Marine Microbiome Engineering, Institute for Advanced Study, Shenzhen University, Shenzhen, 518060, China.
  • Liu Y; Key Laboratory of Optoelectronic Devices and Systems of Ministry of Education and Guangdong Province, College of Optoelectronic Engineering, Shenzhen University, Shenzhen, 518060, China.
  • Yin X; Shenzhen Key Laboratory of Marine Microbiome Engineering, Institute for Advanced Study, Shenzhen University, Shenzhen, 518060, China.
  • Zhou Z; Microbial Ecophysiology Group, Faculty of Biology/Chemistry, University of Bremen, Bremen, D-28359, Germany.
  • Friedrich MW; MARUM, Center for Marine Environmental Sciences, University of Bremen, Bremen, D-28359, Germany.
  • Richter-Heitmann T; Shenzhen Key Laboratory of Marine Microbiome Engineering, Institute for Advanced Study, Shenzhen University, Shenzhen, 518060, China.
  • Nimzyk R; Laboratory of Environmental Microbiology and Toxicology, School of Biological Sciences, The University of Hong Kong, Hong Kong, 999077, China.
  • Kulkarni A; Microbial Ecophysiology Group, Faculty of Biology/Chemistry, University of Bremen, Bremen, D-28359, Germany.
  • Wang X; MARUM, Center for Marine Environmental Sciences, University of Bremen, Bremen, D-28359, Germany.
  • Li W; Microbial Ecophysiology Group, Faculty of Biology/Chemistry, University of Bremen, Bremen, D-28359, Germany.
  • Pan J; Department of Microbe-Plant Interactions, Faculty of Biology/Chemistry, University of Bremen, Bremen, D-28359, Germany.
  • Yang Y; Microbial Ecophysiology Group, Faculty of Biology/Chemistry, University of Bremen, Bremen, D-28359, Germany.
  • Gu JD; Shenzhen Key Laboratory of Marine Microbiome Engineering, Institute for Advanced Study, Shenzhen University, Shenzhen, 518060, China.
  • Li M; Key Laboratory of Optoelectronic Devices and Systems of Ministry of Education and Guangdong Province, College of Optoelectronic Engineering, Shenzhen University, Shenzhen, 518060, China.
Sci China Life Sci ; 63(6): 886-897, 2020 Jun.
Article en En | MEDLINE | ID: mdl-32201928
ABSTRACT
Asgard is an archaeal superphylum that might hold the key to understand the origin of eukaryotes, but its diversity and ecological roles remain poorly understood. Here, we reconstructed 15 metagenomic-assembled genomes from coastal sediments covering most known Asgard archaea and a novel group, which is proposed as a new Asgard phylum named as the "Gerdarchaeota". Genomic analyses predict that Gerdarchaeota are facultative anaerobes in utilizing both organic and inorganic carbon. Unlike their closest relatives Heimdallarchaeota, Gerdarchaeota have genes encoding for cellulase and enzymes involved in the tetrahydromethanopterin-based Wood-Ljungdahl pathway. Transcriptomics showed that most of our identified Asgard archaea are capable of degrading organic matter, including peptides, amino acids and fatty acids, occupying ecological niches in different depths of layers of the sediments. Overall, this study broadens the diversity of the mysterious Asgard archaea and provides evidence for their ecological roles in coastal sediments.
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Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Filogenia / Archaea / Sedimentos Geológicos / Metagenoma Idioma: En Revista: Sci China Life Sci Asunto de la revista: BIOLOGIA / CIENCIA Año: 2020 Tipo del documento: Article País de afiliación: China

Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Filogenia / Archaea / Sedimentos Geológicos / Metagenoma Idioma: En Revista: Sci China Life Sci Asunto de la revista: BIOLOGIA / CIENCIA Año: 2020 Tipo del documento: Article País de afiliación: China