Hierarchical discovery of large-scale and focal copy number alterations in low-coverage cancer genomes.

Khalil, Ahmed Ibrahim Samir; Khyriem, Costerwell; Chattopadhyay, Anupam; Sanyal, Amartya

Khalil, Ahmed Ibrahim Samir; Khyriem, Costerwell; Chattopadhyay, Anupam; Sanyal, Amartya.

Afiliación

Khalil AIS; School of Computer Science and Engineering, Nanyang Technological University, 50 Nanyang Avenue, Singapore, 639798, Singapore.
Khyriem C; School of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore, 637551, Singapore.
Chattopadhyay A; School of Computer Science and Engineering, Nanyang Technological University, 50 Nanyang Avenue, Singapore, 639798, Singapore. anupam@ntu.edu.sg.
Sanyal A; School of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore, 637551, Singapore. asanyal@ntu.edu.sg.

BMC Bioinformatics ; 21(1): 147, 2020 Apr 16.

Article en En | MEDLINE | ID: mdl-32299346

Asunto(s)

Algoritmos; Variaciones en el Número de Copia de ADN/genética; Neoplasias/genética; Secuenciación Completa del Genoma/métodos; Humanos

Palabras clave

Cancer; Copy number detection tool; DNA copy number alteration; Focal amplification and deletion; Genome sequence analysis; Read depth; Segmental aneuploidy; Simulated copy number profile

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Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Algoritmos / Variaciones en el Número de Copia de ADN / Secuenciación Completa del Genoma / Neoplasias Límite: Humans Idioma: En Revista: BMC Bioinformatics Asunto de la revista: INFORMATICA MEDICA Año: 2020 Tipo del documento: Article País de afiliación: Singapur

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