Your browser doesn't support javascript.
loading
Complete microbial genomes for public health in Australia and the Southwest Pacific.
Baines, Sarah L; da Silva, Anders Gonçalves; Carter, Glen P; Jennison, Amy; Rathnayake, Irani; Graham, Rikki M; Sintchenko, Vitali; Wang, Qinning; Rockett, Rebecca J; Timms, Verlaine J; Martinez, Elena; Ballard, Susan; Tomita, Takehiro; Isles, Nicole; Horan, Kristy A; Pitchers, William; Stinear, Timothy P; Williamson, Deborah A; Howden, Benjamin P; Seemann, Torsten.
Afiliación
  • Baines SL; Department of Microbiology and Immunology, The University of Melbourne at the Peter Doherty Institute for Infection and Immunity, Parkville, Victoria 3001, Australia.
  • da Silva AG; Microbiological Diagnostic Unit Public Health Laboratory, Department of Microbiology and Immunology, The University of Melbourne at the Peter Doherty Institute for Infection and Immunity, The University of Melbourne, Parkville, Victoria 3001, Australia.
  • Carter GP; Department of Microbiology and Immunology, The University of Melbourne at the Peter Doherty Institute for Infection and Immunity, Parkville, Victoria 3001, Australia.
  • Jennison A; Public Health Microbiology, Queensland Reference Centre for Microbial and Public Health Genomics, Forensic and Scientific Services, Queensland Department of Health, Archerfield, Queensland 4108, Australia.
  • Rathnayake I; Public Health Microbiology, Queensland Reference Centre for Microbial and Public Health Genomics, Forensic and Scientific Services, Queensland Department of Health, Archerfield, Queensland 4108, Australia.
  • Graham RM; Public Health Microbiology, Queensland Reference Centre for Microbial and Public Health Genomics, Forensic and Scientific Services, Queensland Department of Health, Archerfield, Queensland 4108, Australia.
  • Sintchenko V; Centre for Infectious Diseases and Microbiology - Public Health, Westmead Hospital and NSW Health Pathology, Sydney, New South Wales 2145, Australia.
  • Wang Q; Marie Bashir Institute for Infectious Diseases and Biosecurity, The University of Sydney, Sydney, New South Wales 2006, Australia.
  • Rockett RJ; Centre for Infectious Diseases and Microbiology - Public Health, Westmead Hospital and NSW Health Pathology, Sydney, New South Wales 2145, Australia.
  • Timms VJ; Centre for Infectious Diseases and Microbiology - Public Health, Westmead Hospital and NSW Health Pathology, Sydney, New South Wales 2145, Australia.
  • Martinez E; Marie Bashir Institute for Infectious Diseases and Biosecurity, The University of Sydney, Sydney, New South Wales 2006, Australia.
  • Ballard S; Centre for Infectious Diseases and Microbiology - Public Health, Westmead Hospital and NSW Health Pathology, Sydney, New South Wales 2145, Australia.
  • Tomita T; Marie Bashir Institute for Infectious Diseases and Biosecurity, The University of Sydney, Sydney, New South Wales 2006, Australia.
  • Isles N; Centre for Infectious Diseases and Microbiology - Public Health, Westmead Hospital and NSW Health Pathology, Sydney, New South Wales 2145, Australia.
  • Horan KA; Microbiological Diagnostic Unit Public Health Laboratory, Department of Microbiology and Immunology, The University of Melbourne at the Peter Doherty Institute for Infection and Immunity, The University of Melbourne, Parkville, Victoria 3001, Australia.
  • Pitchers W; Microbiological Diagnostic Unit Public Health Laboratory, Department of Microbiology and Immunology, The University of Melbourne at the Peter Doherty Institute for Infection and Immunity, The University of Melbourne, Parkville, Victoria 3001, Australia.
  • Stinear TP; Microbiological Diagnostic Unit Public Health Laboratory, Department of Microbiology and Immunology, The University of Melbourne at the Peter Doherty Institute for Infection and Immunity, The University of Melbourne, Parkville, Victoria 3001, Australia.
  • Williamson DA; Microbiological Diagnostic Unit Public Health Laboratory, Department of Microbiology and Immunology, The University of Melbourne at the Peter Doherty Institute for Infection and Immunity, The University of Melbourne, Parkville, Victoria 3001, Australia.
  • Howden BP; Microbiological Diagnostic Unit Public Health Laboratory, Department of Microbiology and Immunology, The University of Melbourne at the Peter Doherty Institute for Infection and Immunity, The University of Melbourne, Parkville, Victoria 3001, Australia.
  • Seemann T; Department of Microbiology and Immunology, The University of Melbourne at the Peter Doherty Institute for Infection and Immunity, Parkville, Victoria 3001, Australia.
  • Communicable Diseases Genomics Network Cdgn; Department of Microbiology and Immunology, The University of Melbourne at the Peter Doherty Institute for Infection and Immunity, Parkville, Victoria 3001, Australia.
Microb Genom ; 6(12)2020 12.
Article en En | MEDLINE | ID: mdl-33180013
ABSTRACT
Complete genomes of microbial pathogens are essential for the phylogenomic analyses that increasingly underpin core public health laboratory activities. Here, we announce a BioProject (PRJNA556438) dedicated to sharing complete genomes chosen to represent a range of pathogenic bacteria with regional importance to Australia and the Southwest Pacific; enriching the catalogue of globally available complete genomes for public health while providing valuable strains to regional public health microbiology laboratories. In this first step, we present 26 complete high-quality bacterial genomes. Additionally, we describe here a framework for reconstructing complete microbial genomes and highlight some of the challenges and considerations for accurate and reproducible genome reconstruction.
Asunto(s)
Palabras clave
Texto completo
Imprimir
XML
PubMed Links
Buscar en Google

Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Bacterias / Genoma Bacteriano / Secuenciación Completa del Genoma Límite: Humans País/Región como asunto: Oceania Idioma: En Revista: Microb Genom Año: 2020 Tipo del documento: Article País de afiliación: Australia
Texto completo
Imprimir
XML
PubMed Links
Buscar en Google

Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Bacterias / Genoma Bacteriano / Secuenciación Completa del Genoma Límite: Humans País/Región como asunto: Oceania Idioma: En Revista: Microb Genom Año: 2020 Tipo del documento: Article País de afiliación: Australia