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Poor data stewardship will hinder global genetic diversity surveillance.
Toczydlowski, Rachel H; Liggins, Libby; Gaither, Michelle R; Anderson, Tanner J; Barton, Randi L; Berg, Justin T; Beskid, Sofia G; Davis, Beth; Delgado, Alonso; Farrell, Emily; Ghoojaei, Maryam; Himmelsbach, Nan; Holmes, Ann E; Queeno, Samantha R; Trinh, Thienthanh; Weyand, Courtney A; Bradburd, Gideon S; Riginos, Cynthia; Toonen, Robert J; Crandall, Eric D.
Afiliación
  • Toczydlowski RH; Department of Integrative Biology, Ecology, Evolution, and Behavior Program, Michigan State University, East Lansing, MI 48824; rhtoczyd@msu.edu eric.d.crandall@gmail.com.
  • Liggins L; School of Natural and Computational Sciences, Massey University, Auckland 0745, New Zealand.
  • Gaither MR; Department of Biology, University of Central Florida, Orlando, FL 32816.
  • Anderson TJ; Department of Anthropology, University of Oregon, Eugene, OR 97403.
  • Barton RL; Moss Landing Marine Laboratories, California State University Monterey Bay, Moss Landing, CA 95039.
  • Berg JT; Marine Laboratory, University of Guam, Mangilao 96910, Guam.
  • Beskid SG; Department of Integrative Biology, University of Texas at Austin, Austin, TX 78712.
  • Davis B; Moss Landing Marine Laboratories, California State University Monterey Bay, Moss Landing, CA 95039.
  • Delgado A; Department of Evolution, Ecology, and Organismal Biology, The Ohio State University, Columbus, OH 43210.
  • Farrell E; Department of Biology, University of Central Florida, Orlando, FL 32816.
  • Ghoojaei M; Department of Biology, University of Central Florida, Orlando, FL 32816.
  • Himmelsbach N; Department of Natural Science, Hawaii Pacific University, Honolulu, HI 96813.
  • Holmes AE; Department of Animal Science, University of California, Davis, CA 95616.
  • Queeno SR; Department of Anthropology, University of Oregon, Eugene, OR 97403.
  • Trinh T; Department of Biology, University of Central Florida, Orlando, FL 32816.
  • Weyand CA; Department of Biological Sciences, Auburn University, Auburn, AL 36849.
  • Bradburd GS; Department of Integrative Biology, Ecology, Evolution, and Behavior Program, Michigan State University, East Lansing, MI 48824.
  • Riginos C; School of Biological Sciences, The University of Queensland, Brisbane, QLD 4072, Australia.
  • Toonen RJ; Hawai'i Institute of Marine Biology, University of Hawai'i at Manoa, Kane'ohe, HI 96744.
  • Crandall ED; Department of Biology, Pennsylvania State University, University Park, Pennsylvania, PA 16802 rhtoczyd@msu.edu eric.d.crandall@gmail.com.
Proc Natl Acad Sci U S A ; 118(34)2021 08 24.
Article en En | MEDLINE | ID: mdl-34404731
Genomic data are being produced and archived at a prodigious rate, and current studies could become historical baselines for future global genetic diversity analyses and monitoring programs. However, when we evaluated the potential utility of genomic data from wild and domesticated eukaryote species in the world's largest genomic data repository, we found that most archived genomic datasets (86%) lacked the spatiotemporal metadata necessary for genetic biodiversity surveillance. Labor-intensive scouring of a subset of published papers yielded geospatial coordinates and collection years for only 33% (39% if place names were considered) of these genomic datasets. Streamlined data input processes, updated metadata deposition policies, and enhanced scientific community awareness are urgently needed to preserve these irreplaceable records of today's genetic biodiversity and to plug the growing metadata gap.
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Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Variación Genética / Dinámica Poblacional / Genoma / Genómica / Biodiversidad / Eucariontes / Exactitud de los Datos Tipo de estudio: Screening_studies Idioma: En Revista: Proc Natl Acad Sci U S A Año: 2021 Tipo del documento: Article

Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Variación Genética / Dinámica Poblacional / Genoma / Genómica / Biodiversidad / Eucariontes / Exactitud de los Datos Tipo de estudio: Screening_studies Idioma: En Revista: Proc Natl Acad Sci U S A Año: 2021 Tipo del documento: Article