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Compendium of human transcription factor effector domains.
Soto, Luis F; Li, Zhaorong; Santoso, Clarissa S; Berenson, Anna; Ho, Isabella; Shen, Vivian X; Yuan, Samson; Fuxman Bass, Juan I.
Afiliación
  • Soto LF; Escuela Profesional de Genética y Biotecnología, Facultad de Ciencias Biológicas, Universidad Nacional Mayor de San Marcos, Lima 15081, Perú.
  • Li Z; Bioinformatics Program, Boston University, Boston, MA 02215, USA.
  • Santoso CS; Biology Department, Boston University, Boston, MA 02215, USA; Molecular Biology, Cellular Biology, and Biochemistry Program, Boston University, Boston, MA 02215, USA.
  • Berenson A; Biology Department, Boston University, Boston, MA 02215, USA; Molecular Biology, Cellular Biology, and Biochemistry Program, Boston University, Boston, MA 02215, USA.
  • Ho I; Biology Department, Boston University, Boston, MA 02215, USA.
  • Shen VX; Biology Department, Boston University, Boston, MA 02215, USA.
  • Yuan S; Biology Department, Boston University, Boston, MA 02215, USA.
  • Fuxman Bass JI; Bioinformatics Program, Boston University, Boston, MA 02215, USA; Biology Department, Boston University, Boston, MA 02215, USA; Molecular Biology, Cellular Biology, and Biochemistry Program, Boston University, Boston, MA 02215, USA. Electronic address: fuxman@bu.edu.
Mol Cell ; 82(3): 514-526, 2022 02 03.
Article en En | MEDLINE | ID: mdl-34863368
ABSTRACT
Transcription factors (TFs) regulate gene expression by binding to DNA sequences and modulating transcriptional activity through their effector domains. Despite the central role of effector domains in TF function, there is a current lack of a comprehensive resource and characterization of effector domains. Here, we provide a catalog of 924 effector domains across 594 human TFs. Using this catalog, we characterized the amino acid composition of effector domains, their conservation across species and across the human population, and their roles in human diseases. Furthermore, we provide a classification system for effector domains that constitutes a valuable resource and a blueprint for future experimental studies of TF effector domain function.
Asunto(s)

Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Factores de Transcripción / Transcripción Genética / ADN / Dominios Proteicos Límite: Humans Idioma: En Revista: Mol Cell Asunto de la revista: BIOLOGIA MOLECULAR Año: 2022 Tipo del documento: Article

Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Factores de Transcripción / Transcripción Genética / ADN / Dominios Proteicos Límite: Humans Idioma: En Revista: Mol Cell Asunto de la revista: BIOLOGIA MOLECULAR Año: 2022 Tipo del documento: Article