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Phased, chromosome-scale genome assemblies of tetraploid potato reveal a complex genome, transcriptome, and predicted proteome landscape underpinning genetic diversity.
Hoopes, Genevieve; Meng, Xiaoxi; Hamilton, John P; Achakkagari, Sai Reddy; de Alves Freitas Guesdes, Fernanda; Bolger, Marie E; Coombs, Joseph J; Esselink, Danny; Kaiser, Natalie R; Kodde, Linda; Kyriakidou, Maria; Lavrijssen, Brian; van Lieshout, Natascha; Shereda, Rachel; Tuttle, Heather K; Vaillancourt, Brieanne; Wood, Joshua C; de Boer, Jan M; Bornowski, Nolan; Bourke, Peter; Douches, David; van Eck, Herman J; Ellis, Dave; Feldman, Max J; Gardner, Kyle M; Hopman, Johannes C P; Jiang, Jiming; De Jong, Walter S; Kuhl, Joseph C; Novy, Richard G; Oome, Stan; Sathuvalli, Vidyasagar; Tan, Ek Han; Ursum, Remco A; Vales, M Isabel; Vining, Kelly; Visser, Richard G F; Vossen, Jack; Yencho, G Craig; Anglin, Noelle L; Bachem, Christian W B; Endelman, Jeffrey B; Shannon, Laura M; Strömvik, Martina V; Tai, Helen H; Usadel, Björn; Buell, C Robin; Finkers, Richard.
Afiliación
  • Hoopes G; Department of Plant Biology, Michigan State University, East Lansing, MI 48824, USA.
  • Meng X; Department of Horticultural Science, University of Minnesota, St. Paul, MN 55108, USA.
  • Hamilton JP; Department of Plant Biology, Michigan State University, East Lansing, MI 48824, USA.
  • Achakkagari SR; Department of Plant Science, McGill University, Sainte-Anne-de-Bellevue, QC H9X 3V9, Canada.
  • de Alves Freitas Guesdes F; Plant Breeding, Wageningen University & Research, Plant Breeding, 6708 PB Wageningen, the Netherlands.
  • Bolger ME; IBG-4 Bioinformatics, Forschungszentrum Jülich, Wilhelm Johnen Str, 52428 Jülich, Germany.
  • Coombs JJ; Department of Plant, Soil, and Microbial Sciences, Michigan State University, East Lansing, MI 48824, USA.
  • Esselink D; Plant Breeding, Wageningen University & Research, Plant Breeding, 6708 PB Wageningen, the Netherlands.
  • Kaiser NR; Department of Plant, Soil, and Microbial Sciences, Michigan State University, East Lansing, MI 48824, USA; Bayer Crop Science, Woodland, CA 95695, USA.
  • Kodde L; Plant Breeding, Wageningen University & Research, Plant Breeding, 6708 PB Wageningen, the Netherlands.
  • Kyriakidou M; Department of Plant Science, McGill University, Sainte-Anne-de-Bellevue, QC H9X 3V9, Canada.
  • Lavrijssen B; Plant Breeding, Wageningen University & Research, Plant Breeding, 6708 PB Wageningen, the Netherlands.
  • van Lieshout N; Plant Breeding, Wageningen University & Research, Plant Breeding, 6708 PB Wageningen, the Netherlands.
  • Shereda R; Department of Plant Biology, Michigan State University, East Lansing, MI 48824, USA.
  • Tuttle HK; Department of Horticultural Science, University of Minnesota, St. Paul, MN 55108, USA.
  • Vaillancourt B; Department of Plant Biology, Michigan State University, East Lansing, MI 48824, USA.
  • Wood JC; Department of Plant Biology, Michigan State University, East Lansing, MI 48824, USA.
  • de Boer JM; Averis Seeds B.V., 9640 AA Veendam, the Netherlands.
  • Bornowski N; Department of Plant Biology, Michigan State University, East Lansing, MI 48824, USA.
  • Bourke P; Plant Breeding, Wageningen University & Research, Plant Breeding, 6708 PB Wageningen, the Netherlands.
  • Douches D; Department of Plant, Soil, and Microbial Sciences, Michigan State University, East Lansing, MI 48824, USA.
  • van Eck HJ; Plant Breeding, Wageningen University & Research, Plant Breeding, 6708 PB Wageningen, the Netherlands.
  • Ellis D; International Potato Center, 1895 Avenida La Molina, Lima, Peru.
  • Feldman MJ; USDA-ARS, Prosser, WA 99350, USA.
  • Gardner KM; Agriculture and Agri-Food Canada Fredericton Research and Development Centre, Fredericton, NB E3B 4Z7, Canada.
  • Hopman JCP; Averis Seeds B.V., 9640 AA Veendam, the Netherlands.
  • Jiang J; Department of Plant Biology, Michigan State University, East Lansing, MI 48824, USA; Department of Horticulture, Michigan State University, East Lansing, MI 48824, USA.
  • De Jong WS; School of Integrative Plant Science, Cornell University, Ithaca, NY 14853-1901, USA.
  • Kuhl JC; Department of Plant Sciences, University of Idaho, Moscow, ID 83844, USA.
  • Novy RG; USDA-ARS, Small Grains and Potato Germplasm Research, Aberdeen, ID 83210, USA.
  • Oome S; HZPC Research B.V., Edisonweg 5, 8501 XG Joure, the Netherlands.
  • Sathuvalli V; Department of Crop and Soil Science, Oregon State University, Hermiston, OR 97838, USA.
  • Tan EH; School of Biology and Ecology, University of Maine, 5735 Hitchner Hall Orono, ME 04469, USA.
  • Ursum RA; HZPC Research B.V., Edisonweg 5, 8501 XG Joure, the Netherlands.
  • Vales MI; Department of Horticultural Sciences, Texas A&M University, College Station, TX 77843-2133, USA.
  • Vining K; Department of Horticulture, Oregon State University, Corvallis, OR 97331, USA.
  • Visser RGF; Plant Breeding, Wageningen University & Research, Plant Breeding, 6708 PB Wageningen, the Netherlands.
  • Vossen J; Plant Breeding, Wageningen University & Research, Plant Breeding, 6708 PB Wageningen, the Netherlands.
  • Yencho GC; Department of Horticultural Science, North Carolina State University, Raleigh, NC 27695-7609, USA.
  • Anglin NL; International Potato Center, 1895 Avenida La Molina, Lima, Peru; USDA-ARS, Small Grains and Potato Germplasm Research, Aberdeen, ID 83210, USA.
  • Bachem CWB; Plant Breeding, Wageningen University & Research, Plant Breeding, 6708 PB Wageningen, the Netherlands.
  • Endelman JB; Department of Horticulture, University of Wisconsin-Madison, Madison, WI 53706, USA.
  • Shannon LM; Department of Horticultural Science, University of Minnesota, St. Paul, MN 55108, USA.
  • Strömvik MV; Department of Plant Science, McGill University, Sainte-Anne-de-Bellevue, QC H9X 3V9, Canada.
  • Tai HH; Agriculture and Agri-Food Canada Fredericton Research and Development Centre, Fredericton, NB E3B 4Z7, Canada.
  • Usadel B; IBG-4 Bioinformatics, Forschungszentrum Jülich, Wilhelm Johnen Str, 52428 Jülich, Germany; Institute for Biological Data Science, Heinrich Heine University, Düsseldorf, 40225 Düsseldorf, Germany.
  • Buell CR; Department of Plant Biology, Michigan State University, East Lansing, MI 48824, USA; Plant Resilience Institute, Michigan State University, East Lansing, MI 48824, USA. Electronic address: robin.buell@uga.edu.
  • Finkers R; Plant Breeding, Wageningen University & Research, Plant Breeding, 6708 PB Wageningen, the Netherlands. Electronic address: richard.finkers@wur.nl.
Mol Plant ; 15(3): 520-536, 2022 03 07.
Article en En | MEDLINE | ID: mdl-35026436
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Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Solanum tuberosum / Tetraploidía Tipo de estudio: Prognostic_studies / Risk_factors_studies Idioma: En Revista: Mol Plant Asunto de la revista: BIOLOGIA MOLECULAR / BOTANICA Año: 2022 Tipo del documento: Article País de afiliación: Estados Unidos
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Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Solanum tuberosum / Tetraploidía Tipo de estudio: Prognostic_studies / Risk_factors_studies Idioma: En Revista: Mol Plant Asunto de la revista: BIOLOGIA MOLECULAR / BOTANICA Año: 2022 Tipo del documento: Article País de afiliación: Estados Unidos