SparkGC: Spark based genome compression for large collections of genomes.

Yao, Haichang; Hu, Guangyong; Liu, Shangdong; Fang, Houzhi; Ji, Yimu

Yao, Haichang; Hu, Guangyong; Liu, Shangdong; Fang, Houzhi; Ji, Yimu.

Afiliación

Yao H; School of Computer and Software, Nanjing Vocational University of Industry Technology, Nanjing, 210023, China.
Hu G; School of Computer and Software, Nanjing Vocational University of Industry Technology, Nanjing, 210023, China.
Liu S; School of Computer Science, Nanjing University of Posts and Telecommunications, Nanjing, 210023, China.
Fang H; School of Computer Science, Nanjing University of Posts and Telecommunications, Nanjing, 210023, China.
Ji Y; School of Computer Science, Nanjing University of Posts and Telecommunications, Nanjing, 210023, China. jiym@njupt.edu.cn.

BMC Bioinformatics ; 23(1): 297, 2022 Jul 25.

Article en En | MEDLINE | ID: mdl-35879669

Asunto(s)

Algoritmos; Compresión de Datos; Compresión de Datos/métodos; Genoma; Secuenciación de Nucleótidos de Alto Rendimiento/métodos; Humanos; Análisis de Secuencia de ADN/métodos; Programas Informáticos

Palabras clave

Distributed parallel; Genome compression; Reference-based compression; Spark

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Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Algoritmos / Compresión de Datos Límite: Humans Idioma: En Revista: BMC Bioinformatics Asunto de la revista: INFORMATICA MEDICA Año: 2022 Tipo del documento: Article País de afiliación: China

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