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Developmental dynamics of RNA translation in the human brain.
Duffy, Erin E; Finander, Benjamin; Choi, GiHun; Carter, Ava C; Pritisanac, Iva; Alam, Aqsa; Luria, Victor; Karger, Amir; Phu, William; Sherman, Maxwell A; Assad, Elena G; Pajarillo, Naomi; Khitun, Alexandra; Crouch, Elizabeth E; Ganesh, Sanika; Chen, Jin; Berger, Bonnie; Sestan, Nenad; O'Donnell-Luria, Anne; Huang, Eric J; Griffith, Eric C; Forman-Kay, Julie D; Moses, Alan M; Kalish, Brian T; Greenberg, Michael E.
Afiliación
  • Duffy EE; Department of Neurobiology, Harvard Medical School, Boston, MA, USA. erin_duffylacy@hms.harvard.edu.
  • Finander B; Department of Neurobiology, Harvard Medical School, Boston, MA, USA.
  • Choi G; Department of Neurobiology, Harvard Medical School, Boston, MA, USA.
  • Carter AC; Department of Neurobiology, Harvard Medical School, Boston, MA, USA.
  • Pritisanac I; Department of Cell and Systems Biology, University of Toronto, Toronto, ON, Canada.
  • Alam A; Program in Molecular Medicine, The Hospital for Sick Children, Toronto, ON, Canada.
  • Luria V; Department of Biochemistry, University of Toronto, Toronto, ON, Canada.
  • Karger A; Gottfried Schatz Research Center for Cell Signaling, Metabolism and Aging, Molecular Biology and Biochemistry, Medical University of Graz, Graz, Austria.
  • Phu W; Department of Cell and Systems Biology, University of Toronto, Toronto, ON, Canada.
  • Sherman MA; Department of Neuroscience, Yale School of Medicine, New Haven, CT, USA.
  • Assad EG; Department of Systems Biology, Harvard Medical School, Boston, MA, USA.
  • Pajarillo N; Department of Pediatrics, Division of Genetics and Genomics, Boston Children's Hospital, Boston, MA, USA.
  • Khitun A; IT-Research Computing, Harvard Medical School, Boston, MA, USA.
  • Crouch EE; Department of Pediatrics, Division of Genetics and Genomics, Boston Children's Hospital, Boston, MA, USA.
  • Ganesh S; Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
  • Chen J; Analytic and Translational Genetics Unit, Massachusetts General Hospital, Boston, MA, USA.
  • Berger B; Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Cambridge, MA, USA.
  • Sestan N; Department of Neurobiology, Harvard Medical School, Boston, MA, USA.
  • O'Donnell-Luria A; Department of Neurobiology, Harvard Medical School, Boston, MA, USA.
  • Huang EJ; Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA, USA.
  • Griffith EC; Department of Pediatrics, University of California, San Francisco, San Francisco, CA, USA.
  • Forman-Kay JD; The Eli and Edythe Broad Center of Regeneration Medicine and Stem Cell Research, University of California, San Francisco, San Francisco, CA, USA.
  • Moses AM; Department of Neurobiology, Harvard Medical School, Boston, MA, USA.
  • Kalish BT; Cecil H. and Ida Green Center for Reproductive Biology Sciences, UT Southwestern Medical Center, Dallas, TX, USA.
  • Greenberg ME; Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Cambridge, MA, USA.
Nat Neurosci ; 25(10): 1353-1365, 2022 10.
Article en En | MEDLINE | ID: mdl-36171426
The precise regulation of gene expression is fundamental to neurodevelopment, plasticity and cognitive function. Although several studies have profiled transcription in the developing human brain, there is a gap in understanding of accompanying translational regulation. In this study, we performed ribosome profiling on 73 human prenatal and adult cortex samples. We characterized the translational regulation of annotated open reading frames (ORFs) and identified thousands of previously unknown translation events, including small ORFs that give rise to human-specific and/or brain-specific microproteins, many of which we independently verified using proteomics. Ribosome profiling in stem-cell-derived human neuronal cultures corroborated these findings and revealed that several neuronal activity-induced non-coding RNAs encode previously undescribed microproteins. Physicochemical analysis of brain microproteins identified a class of proteins that contain arginine-glycine-glycine (RGG) repeats and, thus, may be regulators of RNA metabolism. This resource expands the known translational landscape of the human brain and illuminates previously unknown brain-specific protein products.
Asunto(s)

Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Biosíntesis de Proteínas / Regulación de la Expresión Génica Tipo de estudio: Prognostic_studies Límite: Adult / Humans Idioma: En Revista: Nat Neurosci Asunto de la revista: NEUROLOGIA Año: 2022 Tipo del documento: Article País de afiliación: Estados Unidos

Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Biosíntesis de Proteínas / Regulación de la Expresión Génica Tipo de estudio: Prognostic_studies Límite: Adult / Humans Idioma: En Revista: Nat Neurosci Asunto de la revista: NEUROLOGIA Año: 2022 Tipo del documento: Article País de afiliación: Estados Unidos