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GelBox: open-source software to improve rigor and reproducibility when analyzing gels and immunoblots.
Gulbulak, Utku; Wellette-Hunsucker, Austin G; Kampourakis, Thomas; Campbell, Kenneth S.
Afiliación
  • Gulbulak U; Division of Cardiovascular Medicine, University of Kentucky, Lexington, Kentucky, United States.
  • Wellette-Hunsucker AG; Division of Cardiovascular Medicine, University of Kentucky, Lexington, Kentucky, United States.
  • Kampourakis T; Department of Physiology, University of Kentucky, Lexington, Kentucky, United States.
  • Campbell KS; Division of Cardiovascular Medicine, University of Kentucky, Lexington, Kentucky, United States.
Am J Physiol Heart Circ Physiol ; 327(3): H715-H721, 2024 Sep 01.
Article en En | MEDLINE | ID: mdl-39092999
ABSTRACT
GelBox is open-source software that was developed with the goal of enhancing rigor, reproducibility, and transparency when analyzing gels and immunoblots. It combines image adjustments (cropping, rotation, brightness, and contrast), background correction, and band-fitting in a single application. Users can also associate each lane in an image with metadata (for example, sample type). GelBox data files integrate the raw data, supplied metadata, image adjustments, and band-level analyses in a single file to improve traceability. GelBox has a user-friendly interface and was developed using MATLAB. The software, installation instructions, and tutorials, are available at https//campbell-muscle-lab.github.io/GelBox/.NEW & NOTEWORTHY GelBox is open-source software that was developed to enhance rigor, reproducibility, and transparency when analyzing gels and immunoblots. It combines image adjustments (cropping, rotation, brightness, and contrast), background correction, and band-fitting in a single application. Users can also associate each lane in an image with metadata (for example, sample type).
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Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Programas Informáticos Límite: Animals / Humans Idioma: En Revista: Am J Physiol Heart Circ Physiol Asunto de la revista: CARDIOLOGIA / FISIOLOGIA Año: 2024 Tipo del documento: Article País de afiliación: Estados Unidos

Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Programas Informáticos Límite: Animals / Humans Idioma: En Revista: Am J Physiol Heart Circ Physiol Asunto de la revista: CARDIOLOGIA / FISIOLOGIA Año: 2024 Tipo del documento: Article País de afiliación: Estados Unidos