IntelliMS: a platform to efficiently manage and visualize tandem mass spectral data.

With the development of high-speed mass spectrometric techniques, it becomes important to manage large amounts of spectrometric data accurately. We have developed a new data management system with a visualization function named IntelliMS, which can load data into a search engine, filter out the insignificant data, create diagrams of the identification process from spectra to protein and share all the resulting datasets. This software can be used to efficiently manage complicated mass spectral data and the corresponding protein identification information obtained from various proteomics analyses.