SBML and CellML translation in antimony and JSim.
Bioinformatics
; 30(7): 903-7, 2014 Apr 01.
Article
em En
| MEDLINE
| ID: mdl-24215024
ABSTRACT
MOTIVATION The creation and exchange of biologically relevant models is of great interest to many researchers. When multiple standards are in use, models are more readily used and re-used if there exist robust translators between the various accepted formats. SUMMARY:
Antimony 2.4 and JSim 2.10 provide translation capabilities from their own formats to SBML and CellML. All provided unique challenges, stemming from differences in each format's inherent design, in addition to differences in functionality. AVAILABILITY AND IMPLEMENTATION Both programs are available under BSD licenses; Antimony from http//antimony.sourceforge.net/and JSim from http//physiome.org/jsim/. CONTACT lpsmith@u.washington.edu.
Texto completo:
1
Coleções:
01-internacional
Base de dados:
MEDLINE
Assunto principal:
Software
/
Biologia de Sistemas
Idioma:
En
Revista:
Bioinformatics
Assunto da revista:
INFORMATICA MEDICA
Ano de publicação:
2014
Tipo de documento:
Article
País de afiliação:
Estados Unidos