RASTtk: a modular and extensible implementation of the RAST algorithm for building custom annotation pipelines and annotating batches of genomes.

Brettin, Thomas; Davis, James J; Disz, Terry; Edwards, Robert A; Gerdes, Svetlana; Olsen, Gary J; Olson, Robert; Overbeek, Ross; Parrello, Bruce; Pusch, Gordon D; Shukla, Maulik; Thomason, James A; Stevens, Rick; Vonstein, Veronika; Wattam, Alice R; Xia, Fangfang

Brettin, Thomas; Davis, James J; Disz, Terry; Edwards, Robert A; Gerdes, Svetlana; Olsen, Gary J; Olson, Robert; Overbeek, Ross; Parrello, Bruce; Pusch, Gordon D; Shukla, Maulik; Thomason, James A; Stevens, Rick; Vonstein, Veronika; Wattam, Alice R; Xia, Fangfang.

Afiliação

Brettin T; 1] Computing, Environment and Life Sciences, Argonne National Laboratory, Argonne IL, 60439, USA [2] Computation Institute, University of Chicago, Chicago, Illinois, 60637, USA.
Davis JJ; 1] Computing, Environment and Life Sciences, Argonne National Laboratory, Argonne IL, 60439, USA [2] Computation Institute, University of Chicago, Chicago, Illinois, 60637, USA.
Disz T; Fellowship for Interpretation of Genomes, Burr Ridge, IL, 60527, USA.
Edwards RA; 1] Mathematics and Computer Science Division, Argonne National Laboratory, Argonne, IL, 60439, USA [2] Department of Computer Science, San Diego State University, San Diego, California, 92182, USA.
Gerdes S; 1] Computing, Environment and Life Sciences, Argonne National Laboratory, Argonne IL, 60439, USA [2] Fellowship for Interpretation of Genomes, Burr Ridge, IL, 60527, USA.
Olsen GJ; Department of Microbiology, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA.
Olson R; 1] Computation Institute, University of Chicago, Chicago, Illinois, 60637, USA [2] Mathematics and Computer Science Division, Argonne National Laboratory, Argonne, IL, 60439, USA.
Overbeek R; 1] Computing, Environment and Life Sciences, Argonne National Laboratory, Argonne IL, 60439, USA [2] Fellowship for Interpretation of Genomes, Burr Ridge, IL, 60527, USA.
Parrello B; 1] Computing, Environment and Life Sciences, Argonne National Laboratory, Argonne IL, 60439, USA [2] Fellowship for Interpretation of Genomes, Burr Ridge, IL, 60527, USA.
Pusch GD; 1] Computing, Environment and Life Sciences, Argonne National Laboratory, Argonne IL, 60439, USA [2] Fellowship for Interpretation of Genomes, Burr Ridge, IL, 60527, USA.
Shukla M; Virginia Bioinformatics Institute, Virginia Tech University, Blacksburg, VA, 24060, USA.
Thomason JA; USDA-ARS Laboratory at Cold Spring Harbor Laboratory, Cold Spring Harbor NY, 11724, USA.
Stevens R; 1] Computing, Environment and Life Sciences, Argonne National Laboratory, Argonne IL, 60439, USA [2] Computation Institute, University of Chicago, Chicago, Illinois, 60637, USA [3] Department of Computer Science, University of Chicago, Chicago, Illinois, 60637, USA.
Vonstein V; 1] Computing, Environment and Life Sciences, Argonne National Laboratory, Argonne IL, 60439, USA [2] Fellowship for Interpretation of Genomes, Burr Ridge, IL, 60527, USA.
Wattam AR; Virginia Bioinformatics Institute, Virginia Tech University, Blacksburg, VA, 24060, USA.
Xia F; 1] Computation Institute, University of Chicago, Chicago, Illinois, 60637, USA [2] Mathematics and Computer Science Division, Argonne National Laboratory, Argonne, IL, 60439, USA.

Sci Rep ; 5: 8365, 2015 Feb 10.

Article em En | MEDLINE | ID: mdl-25666585

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Anotação de Sequência Molecular/métodos; Software

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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Software / Anotação de Sequência Molecular Tipo de estudo: Prognostic_studies Idioma: En Revista: Sci Rep Ano de publicação: 2015 Tipo de documento: Article País de afiliação: Estados Unidos

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