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Three novel approaches to structural identifiability analysis in mixed-effects models.
Janzén, David L I; Jirstrand, Mats; Chappell, Michael J; Evans, Neil D.
Afiliação
  • Janzén DLI; Department of Systems and Data Analysis, Fraunhofer-Chalmers Centre, Chalmers Science Park, SE-412 88 Gothenburg, Sweden; AstraZeneca RD, SE-431 83 Mölndal, Sweden; School of Engineering, University of Warwick, Coventry CV4 7AL, UK. Electronic address: d.l.i.janzen@warwick.ac.uk.
  • Jirstrand M; Department of Systems and Data Analysis, Fraunhofer-Chalmers Centre, Chalmers Science Park, SE-412 88 Gothenburg, Sweden.
  • Chappell MJ; School of Engineering, University of Warwick, Coventry CV4 7AL, UK.
  • Evans ND; School of Engineering, University of Warwick, Coventry CV4 7AL, UK.
Comput Methods Programs Biomed ; 171: 141-152, 2019 Apr.
Article em En | MEDLINE | ID: mdl-27181677
BACKGROUND AND OBJECTIVE: Structural identifiability is a concept that considers whether the structure of a model together with a set of input-output relations uniquely determines the model parameters. In the mathematical modelling of biological systems, structural identifiability is an important concept since biological interpretations are typically made from the parameter estimates. For a system defined by ordinary differential equations, several methods have been developed to analyse whether the model is structurally identifiable or otherwise. Another well-used modelling framework, which is particularly useful when the experimental data are sparsely sampled and the population variance is of interest, is mixed-effects modelling. However, established identifiability analysis techniques for ordinary differential equations are not directly applicable to such models. METHODS: In this paper, we present and apply three different methods that can be used to study structural identifiability in mixed-effects models. The first method, called the repeated measurement approach, is based on applying a set of previously established statistical theorems. The second method, called the augmented system approach, is based on augmenting the mixed-effects model to an extended state-space form. The third method, called the Laplace transform mixed-effects extension, is based on considering the moment invariants of the systems transfer function as functions of random variables. RESULTS: To illustrate, compare and contrast the application of the three methods, they are applied to a set of mixed-effects models. CONCLUSIONS: Three structural identifiability analysis methods applicable to mixed-effects models have been presented in this paper. As method development of structural identifiability techniques for mixed-effects models has been given very little attention, despite mixed-effects models being widely used, the methods presented in this paper provides a way of handling structural identifiability in mixed-effects models previously not possible.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Bioestatística / Modelos Estatísticos Tipo de estudo: Prognostic_studies / Risk_factors_studies Idioma: En Revista: Comput Methods Programs Biomed Assunto da revista: INFORMATICA MEDICA Ano de publicação: 2019 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Bioestatística / Modelos Estatísticos Tipo de estudo: Prognostic_studies / Risk_factors_studies Idioma: En Revista: Comput Methods Programs Biomed Assunto da revista: INFORMATICA MEDICA Ano de publicação: 2019 Tipo de documento: Article