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Test-retest repeatability of a deep learning architecture in detecting and segmenting clinically significant prostate cancer on apparent diffusion coefficient (ADC) maps.
Hiremath, Amogh; Shiradkar, Rakesh; Merisaari, Harri; Prasanna, Prateek; Ettala, Otto; Taimen, Pekka; Aronen, Hannu J; Boström, Peter J; Jambor, Ivan; Madabhushi, Anant.
Afiliação
  • Hiremath A; Department of Biomedical Engineering, Case Western Reserve University, 10900 Euclid Avenue, Cleveland, OH, 44106, USA. axh672@case.edu.
  • Shiradkar R; Department of Biomedical Engineering, Case Western Reserve University, 10900 Euclid Avenue, Cleveland, OH, 44106, USA.
  • Merisaari H; Department of Biomedical Engineering, Case Western Reserve University, 10900 Euclid Avenue, Cleveland, OH, 44106, USA.
  • Prasanna P; Department of Diagnostic Radiology, University of Turku, Turku, Finland.
  • Ettala O; Department of Biomedical Engineering, Case Western Reserve University, 10900 Euclid Avenue, Cleveland, OH, 44106, USA.
  • Taimen P; Department of Biomedical Informatics, Stony Brook University, Stony Brook, NY, USA.
  • Aronen HJ; Department of Urology, University of Turku and Turku University Hospital, Turku, Finland.
  • Boström PJ; Institute of Biomedicine, Department of Pathology, University of Turku and Turku University Hospital, Turku, Finland.
  • Jambor I; Medical Imaging Centre of Southwest Finland, Turku University Hospital, Turku, Finland.
  • Madabhushi A; Department of Urology, University of Turku and Turku University Hospital, Turku, Finland.
Eur Radiol ; 31(1): 379-391, 2021 Jan.
Article em En | MEDLINE | ID: mdl-32700021
ABSTRACT

OBJECTIVES:

To evaluate short-term test-retest repeatability of a deep learning architecture (U-Net) in slice- and lesion-level detection and segmentation of clinically significant prostate cancer (csPCa Gleason grade group > 1) using diffusion-weighted imaging fitted with monoexponential function, ADCm.

METHODS:

One hundred twelve patients with prostate cancer (PCa) underwent 2 prostate MRI examinations on the same day. PCa areas were annotated using whole mount prostatectomy sections. Two U-Net-based convolutional neural networks were trained on three different ADCm b value settings for (a) slice- and (b) lesion-level detection and (c) segmentation of csPCa. Short-term test-retest repeatability was estimated using intra-class correlation coefficient (ICC(3,1)), proportionate agreement, and dice similarity coefficient (DSC). A 3-fold cross-validation was performed on training set (N = 78 patients) and evaluated for performance and repeatability on testing data (N = 34 patients).

RESULTS:

For the three ADCm b value settings, repeatability of mean ADCm of csPCa lesions was ICC(3,1) = 0.86-0.98. Two CNNs with U-Net-based architecture demonstrated ICC(3,1) in the range of 0.80-0.83, agreement of 66-72%, and DSC of 0.68-0.72 for slice- and lesion-level detection and segmentation of csPCa. Bland-Altman plots suggest that there is no systematic bias in agreement between inter-scan ground truth segmentation repeatability and segmentation repeatability of the networks.

CONCLUSIONS:

For the three ADCm b value settings, two CNNs with U-Net-based architecture were repeatable for the problem of detection of csPCa at the slice-level. The network repeatability in segmenting csPCa lesions is affected by inter-scan variability and ground truth segmentation repeatability and may thus improve with better inter-scan reproducibility. KEY POINTS • For the three ADCm b value settings, two CNNs with U-Net-based architecture were repeatable for the problem of detection of csPCa at the slice-level. • The network repeatability in segmenting csPCa lesions is affected by inter-scan variability and ground truth segmentation repeatability and may thus improve with better inter-scan reproducibility.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Neoplasias da Próstata / Aprendizado Profundo Tipo de estudo: Prognostic_studies Limite: Humans / Male Idioma: En Revista: Eur Radiol Assunto da revista: RADIOLOGIA Ano de publicação: 2021 Tipo de documento: Article País de afiliação: Estados Unidos

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Neoplasias da Próstata / Aprendizado Profundo Tipo de estudo: Prognostic_studies Limite: Humans / Male Idioma: En Revista: Eur Radiol Assunto da revista: RADIOLOGIA Ano de publicação: 2021 Tipo de documento: Article País de afiliação: Estados Unidos