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A comprehensive benchmarking of WGS-based deletion structural variant callers.
Sarwal, Varuni; Niehus, Sebastian; Ayyala, Ram; Kim, Minyoung; Sarkar, Aditya; Chang, Sei; Lu, Angela; Rajkumar, Neha; Darfci-Maher, Nicholas; Littman, Russell; Chhugani, Karishma; Soylev, Arda; Comarova, Zoia; Wesel, Emily; Castellanos, Jacqueline; Chikka, Rahul; Distler, Margaret G; Eskin, Eleazar; Flint, Jonathan; Mangul, Serghei.
Afiliação
  • Sarwal V; Department of Computer Science, University of California Los Angeles, 580 Portola Plaza, Los Angeles, CA 90095, USA.
  • Niehus S; Indian Institute of Technology Delhi, Hauz Khas, New Delhi, Delhi 110016, India.
  • Ayyala R; Berlin Institute of Health (BIH), Anna-Louisa-Karsch-Str. 2, 10178 Berlin, Germany.
  • Kim M; Charité-Universitätsmedizin Berlin, corporate member of Freie Universität Berlin, Humboldt-Universität zu Berlin, and Berlin Institute of Health, Charitéplatz 1, 10117 Berlin, Germany.
  • Sarkar A; Department of Computer Science, University of California Los Angeles, 580 Portola Plaza, Los Angeles, CA 90095, USA.
  • Chang S; Department of Quantitative and Computational Biology, University of Southern California, 1050 Childs Way, Los Angeles, CA 90089.
  • Lu A; School of Computing and Electrical Engineering, Indian Institute of Technology Mandi, Kamand, Mandi, Himachal Pradesh 175001, India.
  • Rajkumar N; Department of Computer Science, University of California Los Angeles, 580 Portola Plaza, Los Angeles, CA 90095, USA.
  • Darfci-Maher N; Department of Computer Science, University of California Los Angeles, 580 Portola Plaza, Los Angeles, CA 90095, USA.
  • Littman R; Department of Bioengineering, Department of Bioengineering, University of California Los Angeles, Los Angeles, CA, 90095.
  • Chhugani K; Department of Computer Science, University of California Los Angeles, 580 Portola Plaza, Los Angeles, CA 90095, USA.
  • Soylev A; Department of Computer Science, University of California Los Angeles, 580 Portola Plaza, Los Angeles, CA 90095, USA.
  • Comarova Z; Department of Clinical Pharmacy, School of Pharmacy, University of Southern California 1985 Zonal Avenue Los Angeles, CA 90089-9121.
  • Wesel E; Department of Computer Engineering, Konya Food and Agriculture University, Konya, Turkey.
  • Castellanos J; Department Civil and Environmental Engineering, University of Southern California, Los Angeles, CA, United States.
  • Chikka R; Department of Computer Science, University of California Los Angeles, 580 Portola Plaza, Los Angeles, CA 90095, USA.
  • Distler MG; Department of Computer Science, University of California Los Angeles, 580 Portola Plaza, Los Angeles, CA 90095, USA.
  • Eskin E; Department of Computer Science, University of California Los Angeles, 580 Portola Plaza, Los Angeles, CA 90095, USA.
  • Flint J; Department of Computer Science, University of California Los Angeles, 580 Portola Plaza, Los Angeles, CA 90095, USA.
  • Mangul S; Department of Computer Science, University of California Los Angeles, 580 Portola Plaza, Los Angeles, CA 90095, USA.
Brief Bioinform ; 23(4)2022 07 18.
Article em En | MEDLINE | ID: mdl-35753701
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Genoma Humano / Benchmarking Limite: Animals / Humans Idioma: En Revista: Brief Bioinform Assunto da revista: BIOLOGIA / INFORMATICA MEDICA Ano de publicação: 2022 Tipo de documento: Article País de afiliação: Estados Unidos
Texto completo
Imprimir
XML
PubMed Links
Buscar no Google

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Genoma Humano / Benchmarking Limite: Animals / Humans Idioma: En Revista: Brief Bioinform Assunto da revista: BIOLOGIA / INFORMATICA MEDICA Ano de publicação: 2022 Tipo de documento: Article País de afiliação: Estados Unidos