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Operational Ontology for Oncology (O3): A Professional Society-Based, Multistakeholder, Consensus-Driven Informatics Standard Supporting Clinical and Research Use of Real-World Data From Patients Treated for Cancer.
Mayo, Charles S; Feng, Mary U; Brock, Kristy K; Kudner, Randi; Balter, Peter; Buchsbaum, Jeffrey C; Caissie, Amanda; Covington, Elizabeth; Daugherty, Emily C; Dekker, Andre L; Fuller, Clifton D; Hallstrom, Anneka L; Hong, David S; Hong, Julian C; Kamran, Sophia C; Katsoulakis, Eva; Kildea, John; Krauze, Andra V; Kruse, Jon J; McNutt, Tod; Mierzwa, Michelle; Moreno, Amy; Palta, Jatinder R; Popple, Richard; Purdie, Thomas G; Richardson, Susan; Sharp, Gregory C; Satomi, Shiraishi; Tarbox, Lawrence R; Venkatesan, Aradhana M; Witztum, Alon; Woods, Kelly E; Yao, Yuan; Farahani, Keyvan; Aneja, Sanjay; Gabriel, Peter E; Hadjiiski, Lubomire; Ruan, Dan; Siewerdsen, Jeffrey H; Bratt, Steven; Casagni, Michelle; Chen, Su; Christodouleas, John C; DiDonato, Anthony; Hayman, James; Kapoor, Rishhab; Kravitz, Saul; Sebastian, Sharon; Von Siebenthal, Martin; Bosch, Walter.
Afiliação
  • Mayo CS; University of Michigan. Electronic address: cmayo@med.umich.edu.
  • Feng MU; University of California, San Francisco.
  • Brock KK; MD Anderson Cancer Center.
  • Kudner R; American Society of Radiation Oncology.
  • Balter P; MD Anderson Cancer Center.
  • Buchsbaum JC; National Cancer Institute.
  • Caissie A; Dalhousie University.
  • Covington E; University of Michigan.
  • Daugherty EC; University of Cincinnati Medical Center.
  • Dekker AL; Maastro Clinic.
  • Fuller CD; MD Anderson Cancer Center.
  • Hallstrom AL; Wellesley College.
  • Hong DS; University of Southern California.
  • Hong JC; University of California, San Francisco.
  • Kamran SC; Massachusetts General Hospital.
  • Katsoulakis E; James A. Haley VA Medical Center.
  • Kildea J; McGill University.
  • Krauze AV; National Institutes of Health.
  • Kruse JJ; Mayo Clinic.
  • McNutt T; Johns Hopkins University.
  • Mierzwa M; University of Michigan.
  • Moreno A; MD Anderson Cancer Center.
  • Palta JR; Virginia Commonwealth University.
  • Popple R; University of Alabama at Birmingham.
  • Purdie TG; Princess Margaret Cancer Center.
  • Richardson S; Swedish Cancer Institute.
  • Sharp GC; Massachusetts General Hospital.
  • Satomi S; Mayo Clinic.
  • Tarbox LR; University of Arkansas.
  • Venkatesan AM; MD Anderson Cancer Center.
  • Witztum A; University of California, San Francisco.
  • Woods KE; University of Southern California.
  • Yao Y; University of Michigan.
  • Farahani K; National Cancer Institute.
  • Aneja S; Yale University.
  • Gabriel PE; University of Pennsylvania.
  • Hadjiiski L; University of Michigan.
  • Ruan D; University of California, Los Angeles.
  • Siewerdsen JH; Johns Hopkins University.
  • Bratt S; MITRE Corporation.
  • Casagni M; MITRE Corporation.
  • Chen S; MITRE Corporation.
  • Christodouleas JC; University of Pennsylvania.
  • DiDonato A; MITRE Corporation.
  • Hayman J; University of Michigan.
  • Kapoor R; Virginia Commonwealth University.
  • Kravitz S; MITRE Corporation.
  • Sebastian S; MITRE Corporation.
  • Von Siebenthal M; Varian Medical Systems.
  • Bosch W; Washington University in St. Louis.
Int J Radiat Oncol Biol Phys ; 117(3): 533-550, 2023 11 01.
Article em En | MEDLINE | ID: mdl-37244628
PURPOSE: The ongoing lack of data standardization severely undermines the potential for automated learning from the vast amount of information routinely archived in electronic health records (EHRs), radiation oncology information systems, treatment planning systems, and other cancer care and outcomes databases. We sought to create a standardized ontology for clinical data, social determinants of health, and other radiation oncology concepts and interrelationships. METHODS AND MATERIALS: The American Association of Physicists in Medicine's Big Data Science Committee was initiated in July 2019 to explore common ground from the stakeholders' collective experience of issues that typically compromise the formation of large inter- and intra-institutional databases from EHRs. The Big Data Science Committee adopted an iterative, cyclical approach to engaging stakeholders beyond its membership to optimize the integration of diverse perspectives from the community. RESULTS: We developed the Operational Ontology for Oncology (O3), which identified 42 key elements, 359 attributes, 144 value sets, and 155 relationships ranked in relative importance of clinical significance, likelihood of availability in EHRs, and the ability to modify routine clinical processes to permit aggregation. Recommendations are provided for best use and development of the O3 to 4 constituencies: device manufacturers, centers of clinical care, researchers, and professional societies. CONCLUSIONS: O3 is designed to extend and interoperate with existing global infrastructure and data science standards. The implementation of these recommendations will lower the barriers for aggregation of information that could be used to create large, representative, findable, accessible, interoperable, and reusable data sets to support the scientific objectives of grant programs. The construction of comprehensive "real-world" data sets and application of advanced analytical techniques, including artificial intelligence, holds the potential to revolutionize patient management and improve outcomes by leveraging increased access to information derived from larger, more representative data sets.
Assuntos

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Radioterapia (Especialidade) / Neoplasias Tipo de estudo: Guideline Limite: Humans Idioma: En Revista: Int J Radiat Oncol Biol Phys Ano de publicação: 2023 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Radioterapia (Especialidade) / Neoplasias Tipo de estudo: Guideline Limite: Humans Idioma: En Revista: Int J Radiat Oncol Biol Phys Ano de publicação: 2023 Tipo de documento: Article