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1.
Proc Natl Acad Sci U S A ; 118(33)2021 08 17.
Artículo en Inglés | MEDLINE | ID: mdl-34385328

RESUMEN

Once inside the host cell, DNA viruses must overcome the physical barrier posed by the nuclear envelope to establish a successful infection. The mechanism underlying this process remains unclear. Here, we show that the herpesvirus exploits the immune adaptor stimulator of interferon genes (STING) to facilitate nuclear import of the viral genome. Following the entry of the viral capsid into the cell, STING binds the viral capsid, mediates capsid docking to the nuclear pore complex via physical interaction, and subsequently enables accumulation of the viral genome in the nucleus. Silencing STING in human cytomegalovirus (HCMV)-susceptible cells inhibited nuclear import of the viral genome and reduced the ensuing viral gene expression. Overexpressing STING increased the host cell's susceptibility to HCMV and herpes simplex virus 1 by improving the nuclear delivery of viral DNA at the early stage of infection. These observations suggest that the proviral activity of STING is conserved and exploited by the herpesvirus family. Intriguingly, in monocytes, which act as latent reservoirs of HCMV, STING deficiency negatively regulated the establishment of HCMV latency and reactivation. Our findings identify STING as a proviral host factor regulating latency and reactivation of herpesviruses.


Asunto(s)
Citomegalovirus/fisiología , ADN Viral/metabolismo , Genoma Viral/fisiología , Proteínas de la Membrana/metabolismo , Replicación Viral/fisiología , Proteínas de la Cápside/genética , Proteínas de la Cápside/metabolismo , Línea Celular , ADN Viral/genética , Regulación Viral de la Expresión Génica , Proteínas de la Membrana/genética , Interferencia de ARN , ARN Interferente Pequeño , Internalización del Virus
2.
PLoS Genet ; 17(4): e1009523, 2021 04.
Artículo en Inglés | MEDLINE | ID: mdl-33857133

RESUMEN

The comorbid association of autoimmune diseases with cancers has been a major obstacle to successful anti-cancer treatment. Cancer survival rate decreases significantly in patients with preexisting autoimmunity. However, to date, the molecular and cellular profiles of such comorbidities are poorly understood. We used Aicardi-Goutières syndrome (AGS) as a model autoimmune disease and explored the underlying mechanisms of genome instability in AGS-associated-gene-deficient patient cells. We found that R-loops are highly enriched at transcription-replication conflict regions of the genome in fibroblast of patients bearing SAMHD1 mutation, which is the AGS-associated-gene mutation most frequently reported with tumor and malignancies. In SAMHD1-depleted cells, R-loops accumulated with the concomitant activation of DNA damage responses. Removal of R-loops in SAMHD1 deficiency reduced cellular responses to genome instability. Furthermore, downregulation of SAMHD1 expression is associated with various types of cancer and poor survival rate. Our findings suggest that SAMHD1 functions as a tumor suppressor by resolving R-loops, and thus, SAMHD1 and R-loop may be novel diagnostic markers and targets for patient stratification in anti-cancer therapy.


Asunto(s)
Enfermedades Autoinmunes del Sistema Nervioso/genética , Enfermedades Autoinmunes/genética , Inestabilidad Genómica/genética , Malformaciones del Sistema Nervioso/genética , Proteína 1 que Contiene Dominios SAM y HD/genética , Enfermedades Autoinmunes/inmunología , Enfermedades Autoinmunes/patología , Enfermedades Autoinmunes del Sistema Nervioso/inmunología , Enfermedades Autoinmunes del Sistema Nervioso/patología , Línea Celular Tumoral , Daño del ADN/genética , Replicación del ADN/genética , Fibroblastos/metabolismo , Genoma Humano/genética , Humanos , Mutación/genética , Neoplasias/genética , Neoplasias/terapia , Malformaciones del Sistema Nervioso/inmunología , Malformaciones del Sistema Nervioso/patología , Estructuras R-Loop/genética , Proteína 1 que Contiene Dominios SAM y HD/ultraestructura , Transcripción Genética/genética , Transfección
3.
Nat Immunol ; 12(10): 984-91, 2011 Sep 04.
Artículo en Inglés | MEDLINE | ID: mdl-21892175

RESUMEN

Major histocompatibility complex (MHC) class I molecules present peptides on the cell surface to CD8(+) T cells, which is critical for the killing of virus-infected or transformed cells. Precursors of MHC class I-presented peptides are trimmed to mature epitopes by the aminopeptidase ERAP1. The US2-US11 genomic region of human cytomegalovirus (HCMV) is dispensable for viral replication and encodes three microRNAs (miRNAs). We show here that HCMV miR-US4-1 specifically downregulated ERAP1 expression during viral infection. Accordingly, the trimming of HCMV-derived peptides was inhibited, which led to less susceptibility of infected cells to HCMV-specific cytotoxic T lymphocytes (CTLs). Our findings identify a previously unknown viral miRNA-based CTL-evasion mechanism that targets a key step in the MHC class I antigen-processing pathway.


Asunto(s)
Aminopeptidasas/antagonistas & inhibidores , Linfocitos T CD8-positivos/inmunología , Citomegalovirus/genética , MicroARNs/fisiología , Aminopeptidasas/genética , Aminopeptidasas/fisiología , Presentación de Antígeno , Línea Celular , Citomegalovirus/inmunología , Infecciones por Citomegalovirus/inmunología , Regulación hacia Abajo , Humanos , Antígenos de Histocompatibilidad Menor , Ovalbúmina/metabolismo
4.
J Immunol ; 207(7): 1926-1936, 2021 10 01.
Artículo en Inglés | MEDLINE | ID: mdl-34470856

RESUMEN

Innate immune sensing of cytosolic DNA via absent in melanoma 2 (AIM2) is a key mechanism leading to inflammatory responses. As aberrant immune responses by dysregulated AIM2 are associated with autoinflammatory diseases, activation of the AIM2 inflammasome should be tightly controlled. In this study, we discovered that ubiquitination and deubiquitination of AIM2 are critical events that regulate AIM2 inflammasome activation. In resting human macrophage cells, AIM2 is constitutively ubiquitinated and undergoes proteasomal degradation to avoid autoinflammation. Upon DNA stimulation, USP21 binds to AIM2 and deubiquitinates it, thereby increasing its protein stability. In addition to the role of USP21 in regulating AIM2 turnover, we uncovered that USP21-mediated deubiquitination of AIM2 is required for the assembly of the AIM2 inflammasome. Depletion of USP21 does not affect the DNA-binding ability of AIM2 but inhibits the formation of the AIM2-ASC complex. Our findings establish that fine-tuning of AIM2 by the ubiquitin system is important for regulating AIM2 inflammasome activation.


Asunto(s)
Proteínas de Unión al ADN/metabolismo , Inflamasomas/metabolismo , Inflamación/inmunología , Macrófagos/inmunología , Ubiquitina Tiolesterasa/metabolismo , Regulación de la Expresión Génica , Células HEK293 , Humanos , Inmunidad Innata , Unión Proteica , Estabilidad Proteica , ARN Interferente Pequeño/genética , Células THP-1 , Ubiquitina Tiolesterasa/genética , Ubiquitinación
5.
Proc Natl Acad Sci U S A ; 116(37): 18619-18628, 2019 09 10.
Artículo en Inglés | MEDLINE | ID: mdl-31451648

RESUMEN

RNA represents a pivotal component of host-pathogen interactions. Human cytomegalovirus (HCMV) infection causes extensive alteration in host RNA metabolism, but the functional relationship between the virus and cellular RNA processing remains largely unknown. Through loss-of-function screening, we show that HCMV requires multiple RNA-processing machineries for efficient viral lytic production. In particular, the cellular RNA-binding protein Roquin, whose expression is actively stimulated by HCMV, plays an essential role in inhibiting the innate immune response. Transcriptome profiling revealed Roquin-dependent global down-regulation of proinflammatory cytokines and antiviral genes in HCMV-infected cells. Furthermore, using cross-linking immunoprecipitation (CLIP)-sequencing (seq), we identified IFN regulatory factor 1 (IRF1), a master transcriptional activator of immune responses, as a Roquin target gene. Roquin reduces IRF1 expression by directly binding to its mRNA, thereby enabling suppression of a variety of antiviral genes. This study demonstrates how HCMV exploits host RNA-binding protein to prevent a cellular antiviral response and offers mechanistic insight into the potential development of CMV therapeutics.


Asunto(s)
Citocinas/genética , Infecciones por Citomegalovirus/inmunología , Citomegalovirus/inmunología , Factor 1 Regulador del Interferón/genética , Proteínas de Unión al ARN/metabolismo , Ubiquitina-Proteína Ligasas/metabolismo , Línea Celular Tumoral , Células Cultivadas , Citocinas/inmunología , Infecciones por Citomegalovirus/genética , Infecciones por Citomegalovirus/virología , Regulación hacia Abajo/inmunología , Fibroblastos , Perfilación de la Expresión Génica , Interacciones Huésped-Patógeno/genética , Interacciones Huésped-Patógeno/inmunología , Humanos , Evasión Inmune , Inmunidad Innata/genética , Factor 1 Regulador del Interferón/metabolismo , Cultivo Primario de Células , ARN Mensajero/metabolismo , Proteínas de Unión al ARN/inmunología , Ubiquitina-Proteína Ligasas/inmunología , Replicación Viral
6.
Nucleic Acids Res ; 46(4): 1912-1926, 2018 02 28.
Artículo en Inglés | MEDLINE | ID: mdl-29315404

RESUMEN

Long interspersed nuclear element 1 is an autonomous non-long terminal repeat retrotransposon that comprises ∼17% of the human genome. Its spontaneous retrotransposition and the accumulation of heritable L1 insertions can potentially result in genome instability and sporadic disorders. Moloney leukemia virus 10 homolog (MOV10), a putative RNA helicase, has been implicated in inhibiting L1 replication, although its underlying mechanism of action remains obscure. Moreover, the physiological relevance of MOV10-mediated L1 regulation in human disease has not yet been examined. Using a proteomic approach, we identified RNASEH2 as a binding partner of MOV10. We show that MOV10 interacts with RNASEH2, and their interplay is crucial for restricting L1 retrotransposition. RNASEH2 and MOV10 co-localize in the nucleus, and RNASEH2 binds to L1 RNAs in a MOV10-dependent manner. Small hairpin RNA-mediated depletion of either RNASEH2A or MOV10 results in an accumulation of L1-specific RNA-DNA hybrids, suggesting they contribute to prevent formation of vital L1 heteroduplexes during retrotransposition. Furthermore, we show that RNASEH2-MOV10-mediated L1 restriction downregulates expression of the rheumatoid arthritis-associated inflammatory cytokines and matrix-degrading proteinases in synovial cells, implicating a potential causal relationship between them and disease development in terms of disease predisposition.


Asunto(s)
Elementos de Nucleótido Esparcido Largo , ARN Helicasas/metabolismo , Ribonucleasa H/metabolismo , Artritis Reumatoide/genética , Línea Celular , ADN/metabolismo , Progresión de la Enfermedad , Humanos , ARN/metabolismo , Ribonucleoproteínas/metabolismo
7.
Proc Natl Acad Sci U S A ; 113(50): 14390-14395, 2016 12 13.
Artículo en Inglés | MEDLINE | ID: mdl-27911820

RESUMEN

The innate immune system detects viral nucleic acids and induces type I interferon (IFN) responses. The RNA- and DNA-sensing pathways converge on the protein kinase TANK-binding kinase 1 (TBK1) and the transcription factor IFN-regulatory factor 3 (IRF3). Activation of the IFN signaling pathway is known to trigger the redistribution of key signaling molecules to punctate perinuclear structures, but the mediators of this spatiotemporal regulation have yet to be defined. Here we identify butyrophilin 3A1 (BTN3A1) as a positive regulator of nucleic acid-mediated type I IFN signaling. Depletion of BTN3A1 inhibits the cytoplasmic nucleic acid- or virus-triggered activation of IFN-ß production. In the resting state, BTN3A1 is constitutively associated with TBK1. Stimulation with nucleic acids induces the redistribution of the BTN3A1-TBK1 complex to the perinuclear region, where BTN3A1 mediates the interaction between TBK1 and IRF3, leading to the phosphorylation of IRF3. Furthermore, we show that microtubule-associated protein 4 (MAP4) controls the dynein-dependent transport of BTN3A1 in response to nucleic acid stimulation, thereby identifying MAP4 as an upstream regulator of BTN3A1. Thus, the depletion of either MAP4 or BTN3A1 impairs cytosolic DNA- or RNA-mediated type I IFN responses. Our findings demonstrate a critical role for MAP4 and BTN3A1 in the spatiotemporal regulation of TBK1, a central player in the intracellular nucleic acid-sensing pathways involved in antiviral signaling.


Asunto(s)
Antígenos CD/metabolismo , Butirofilinas/metabolismo , Dineínas/metabolismo , Factor 3 Regulador del Interferón/metabolismo , Proteínas Asociadas a Microtúbulos/metabolismo , Proteínas Serina-Treonina Quinasas/metabolismo , Transporte Activo de Núcleo Celular , Antígenos CD/genética , Butirofilinas/antagonistas & inhibidores , Butirofilinas/genética , Línea Celular , ADN Viral/inmunología , Técnicas de Silenciamiento del Gen , Células HEK293 , Células HeLa , Humanos , Inmunidad Innata , Interferón Tipo I/biosíntesis , Microtúbulos/metabolismo , Modelos Biológicos , Fosforilación , ARN Interferente Pequeño/genética , ARN Viral/inmunología , Transducción de Señal
8.
Biochem Biophys Res Commun ; 477(4): 977-981, 2016 09 02.
Artículo en Inglés | MEDLINE | ID: mdl-27387229

RESUMEN

SAMHD1 plays diverse roles in innate immunity, autoimmune diseases and HIV restriction, but the mechanisms involved are still unclear. SAMHD1 has been reported to have both dNTPase and RNase activities. However, whether SAMHD1 possesses RNase activity remains highly controversial. Here, we found that, unlike conventional hydrolytic exoribonucleases, SAMHD1 requires inorganic phosphate to degrade RNA substrates and produces nucleotide diphosphates rather than nucleoside monophosphates, which indicated that SAMHD1 is a phosphorolytic but not hydrolytic 3'-5' exoribonuclease. Furthermore, SAMHD1 preferentially cleaved single-stranded RNAs comprising A20 or U20, whereas neither C20 nor G20 was susceptible to SAMHD1-mediated degradation. Our findings will facilitate more advanced studies into the role of the SAMHD1 RNase function in the cellular pathogenesis implicated in nucleic acid-triggered inflammatory responses and the anti-retroviral function of SAMHD1.


Asunto(s)
Enfermedades Autoinmunes del Sistema Nervioso/enzimología , Fosfatos de Dinucleósidos/química , Proteínas de Unión al GTP Monoméricas/química , Malformaciones del Sistema Nervioso/enzimología , ARN/química , Proteínas de los Retroviridae/química , Ribonucleasas/química , Sitios de Unión , Activación Enzimática , Humanos , Hidrólisis , Fosforilación , Unión Proteica , Proteína 1 que Contiene Dominios SAM y HD
9.
Retrovirology ; 12: 46, 2015 Jun 02.
Artículo en Inglés | MEDLINE | ID: mdl-26032178

RESUMEN

BACKGROUND: Human SAMHD1 possesses dual enzymatic functions. It acts as both a dGTP-dependent triphosphohydrolase and as an exoribonuclease. The dNTPase function depletes the cellular dNTP pool, which is required for retroviral reverse transcription in differentiated myeloid cells and resting CD4(+) T cells; thus this activity mainly plays a role in SAMHD1-mediated retroviral restriction. However, a recent study demonstrated that SAMHD1 directly targets HIV-1 genomic RNA via its RNase activity, and that this function (rather than dNTPase activity) is sufficient for HIV-1 restriction. While HIV-1 genomic RNA is a potent target for SAMHD1 during viral infection, the specificity of SAMHD1-mediated RNase activity during infection by other viruses is unclear. RESULTS: The results of the present study showed that SAMHD1 specifically degrades retroviral genomic RNA in monocyte-derived macrophage-like cells and in primary monocyte-derived macrophages. Consistent with this, SAMHD1 selectively restricted retroviral replication, but did not affect the replication of other common non-retro RNA genome viruses, suggesting that the RNase-mediated antiviral function of SAMHD1 is limited to retroviruses. In addition, neither inhibiting reverse transcription by treatment with several reverse transcriptase inhibitors nor infection with reverse transcriptase-defective HIV-1 altered RNA levels after viral challenge, indicating that the retrovirus-specific RNase function is not dependent on processes associated with retroviral reverse transcription. CONCLUSIONS: The results presented herein suggest that the RNase activity of SAMHD1 is sufficient to control the replication of retroviruses, but not that of non-retro RNA viruses.


Asunto(s)
Interacciones Huésped-Patógeno , Inmunidad Innata , Proteínas de Unión al GTP Monoméricas/metabolismo , ARN Viral/metabolismo , Retroviridae/inmunología , Ribonucleasas/metabolismo , Replicación Viral , Línea Celular , Humanos , Hidrólisis , Macrófagos/inmunología , Macrófagos/virología , Retroviridae/fisiología , Proteína 1 que Contiene Dominios SAM y HD
10.
EMBO J ; 29(2): 363-75, 2010 Jan 20.
Artículo en Inglés | MEDLINE | ID: mdl-19942855

RESUMEN

The human cytomegalovirus glycoprotein US2 induces dislocation of MHC class I heavy chains from the endoplasmic reticulum (ER) into the cytosol and targets them for proteasomal degradation. Signal peptide peptidase (SPP) has been shown to be integral for US2-induced dislocation of MHC class I heavy chains although its mechanism of action remains poorly understood. Here, we show that knockdown of protein disulphide isomerase (PDI) by RNA-mediated interference inhibited the degradation of MHC class I molecules catalysed by US2 but not by its functional homolog US11. Overexpression of the substrate-binding mutant of PDI, but not the catalytically inactive mutant, dominant-negatively inhibited US2-mediated dislocation of MHC class I molecules by preventing their release from US2. Furthermore, PDI associated with SPP independently of US2 and knockdown of PDI inhibited SPP-mediated degradation of CD3delta but not Derlin-1-dependent degradation of CFTR DeltaF508. Together, our data suggest that PDI is a component of the SPP-mediated ER-associated degradation machinery.


Asunto(s)
Ácido Aspártico Endopeptidasas/metabolismo , Citomegalovirus/metabolismo , Antígenos de Histocompatibilidad Clase I/metabolismo , Proteína Disulfuro Isomerasas/metabolismo , Proteínas del Envoltorio Viral/metabolismo , Animales , Retículo Endoplásmico/metabolismo , Células HeLa , Humanos , Proteínas de la Membrana/metabolismo , Mutación , Unión Proteica , Proteína Disulfuro Isomerasas/genética , Pliegue de Proteína , Interferencia de ARN , Proteínas de Unión al ARN/metabolismo , Especificidad por Sustrato , Proteínas Virales/metabolismo
11.
PLoS Pathog ; 8(3): e1002577, 2012.
Artículo en Inglés | MEDLINE | ID: mdl-22412377

RESUMEN

The human cytomegalovirus (HCMV) clinical strain Toledo and the attenuated strain AD169 exhibit a striking difference in pathogenic potential and cell tropism. The virulent Toledo genome contains a 15-kb segment, which is present in all virulent strains but is absent from the AD169 genome. The pathogenic differences between the 2 strains are thought to be associated with this additional genome segment. Cytokines induced during viral infection play major roles in the regulation of the cellular interactions involving cells of the immune and inflammatory systems and consequently determine the pathogenic outcome of infection. The chemokine RANTES (Regulated on activation, normal T-cell expressed and secreted) attracts immune cells during inflammation and the immune response, indicating a role for RANTES in viral pathogenesis. Here, we show that RANTES was downregulated in human foreskin fibroblast (HFF) cells at a later stage after infection with the Toledo strain but not after infection with the AD169 strain. miR-UL148D, the only miRNA predicted from the UL/b' sequences of the Toledo genome, targeted the 3'-untranslated region of RANTES and induced degradation of RANTES mRNA during infection. While wild-type Toledo inhibited expression of RANTES in HFF cells, Toledo mutant virus in which miR-UL148D is specifically abrogated did not repress RANTES expression. Furthermore, miR-UL148D-mediated downregulation of RANTES was inhibited by treatment with a miR-UL148D-specific inhibitor designed to bind to the miR-UL148D sequence via an antisense mechanism, supporting the potential value of antisense agents as therapeutic tools directed against HCMV. Our findings identify a viral microRNA as a novel negative regulator of the chemokine RANTES and provide clues for understanding the pathogenesis of the clinical strains of HCMV.


Asunto(s)
Quimiocina CCL5/metabolismo , Infecciones por Citomegalovirus/virología , Citomegalovirus/genética , Fibroblastos/citología , Prepucio/citología , MicroARNs/metabolismo , Quimiocina CCL5/genética , Citomegalovirus/patogenicidad , Infecciones por Citomegalovirus/metabolismo , Regulación hacia Abajo , Fibroblastos/metabolismo , Fibroblastos/virología , Interacciones Huésped-Patógeno , Humanos , Masculino , MicroARNs/genética , Replicación Viral
12.
Traffic ; 12(1): 42-55, 2011 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-20946353

RESUMEN

Major histocompatibility complex class I (MHC-I) molecules bind antigens in the endoplasmic reticulum (ER) and deliver them to the cell surface for immune surveillance of viruses and tumors. Whereas key steps of MHC-I assembly and its acquisition of peptides in the ER are relatively well defined, little is known about how MHC-I molecules leave the ER for cell surface expression. Here, we show that ER export of human classical MHC-I molecules (HLA-A/-B/-C) is regulated by their C-terminal single amino acid, valine or alanine. These amino acids, conserved in nearly all known human MHC-I alleles, serve as the ER export signal by binding to the Sec23/24 complex, a structural component of coat protein complex II (COPII) vesicles that mediate ER-to-Golgi trafficking. Together, our results strongly suggest that ER export of human classical MHC-I molecules can occur via a receptor-mediated process dictated by a highly conserved ER export signal.


Asunto(s)
Aminoácidos/metabolismo , Retículo Endoplásmico/metabolismo , Complejo Mayor de Histocompatibilidad/fisiología , Alanina/metabolismo , Secuencia de Aminoácidos , Proteína Coat de Complejo I/metabolismo , Antígeno HLA-A2/metabolismo , Células HeLa , Humanos , Proteínas de la Membrana/metabolismo , Datos de Secuencia Molecular , Proteínas de Transporte Vesicular/metabolismo , Proteínas de Transporte Vesicular/fisiología
13.
Sci Rep ; 12(1): 19303, 2022 11 11.
Artículo en Inglés | MEDLINE | ID: mdl-36369338

RESUMEN

Small, compact genomes confer a selective advantage to viruses, yet human cytomegalovirus (HCMV) expresses the long non-coding RNAs (lncRNAs); RNA1.2, RNA2.7, RNA4.9, and RNA5.0. Little is known about the function of these lncRNAs in the virus life cycle. Here, we dissected the functional and molecular landscape of HCMV lncRNAs. We found that HCMV lncRNAs occupy ~ 30% and 50-60% of total and poly(A)+viral transcriptome, respectively, throughout virus life cycle. RNA1.2, RNA2.7, and RNA4.9, the three abundantly expressed lncRNAs, appear to be essential in all infection states. Among these three lncRNAs, depletion of RNA2.7 and RNA4.9 results in the greatest defect in maintaining latent reservoir and promoting lytic replication, respectively. Moreover, we delineated the global post-transcriptional nature of HCMV lncRNAs by nanopore direct RNA sequencing and interactome analysis. We revealed that the lncRNAs are modified with N6-methyladenosine (m6A) and interact with m6A readers in all infection states. In-depth analysis demonstrated that m6A machineries stabilize HCMV lncRNAs, which could account for the overwhelming abundance of viral lncRNAs. Our study lays the groundwork for understanding the viral lncRNA-mediated regulation of host-virus interaction throughout the HCMV life cycle.


Asunto(s)
Infecciones por Citomegalovirus , ARN Largo no Codificante , Humanos , Citomegalovirus/genética , ARN Largo no Codificante/genética , Células Cultivadas , Transcriptoma , Replicación Viral/genética
14.
J Immunol ; 183(11): 7379-87, 2009 Dec 01.
Artículo en Inglés | MEDLINE | ID: mdl-19917696

RESUMEN

Antigenic peptides presented by MHC class I molecules are generated mainly by the proteasome in the cytosol. Several cytosolic aminopeptidases further trim proteasomal products to form mature epitopes or individual amino acids. However, the distinct function of cytosolic aminopeptidases in MHC class I Ag processing remains to be elucidated. In this study, we show that cytosolic aminopeptidases differentially affect the cell surface expression of MHC class I molecules in an allele-dependent manner in human cells. In HeLa cells, knockdown of puromycin-sensitive aminopeptidase (PSA) by RNA interference inhibited optimal peptide loading of MHC class I molecules, and their cell surface expression was correspondingly reduced. In contrast, depletion of bleomycin hydrolase (BH) enhanced optimal peptide loading and cell surface expression of MHC class I molecules. We did not find evidence on the effect of leucine aminopeptidase knockdown on the MHC class I Ag presentation. Moreover, we demonstrated that PSA and BH influence the peptide loading and surface expression of MHC class I in an allele-specific manner. In the absence of either PSA or BH, the surface expression and peptide-dependent stability of HLA-A68 were reduced, whereas those of HLA-B15 were enhanced. The surface expression and peptide-dependent stability of HLA-A3 were enhanced by BH knockdown, although those of HLA-B8 were increased in PSA-depleted conditions.


Asunto(s)
Aminopeptidasas/metabolismo , Presentación de Antígeno/genética , Citosol/enzimología , Antígenos de Histocompatibilidad Clase I/metabolismo , Alelos , Aminopeptidasas/inmunología , Presentación de Antígeno/inmunología , Western Blotting , Citosol/inmunología , Citometría de Flujo , Células HeLa , Antígenos de Histocompatibilidad Clase I/genética , Antígenos de Histocompatibilidad Clase I/inmunología , Humanos , Inmunoprecipitación , Interferencia de ARN , Transfección
15.
ACS Sens ; 6(3): 815-822, 2021 03 26.
Artículo en Inglés | MEDLINE | ID: mdl-33529521

RESUMEN

A human cytomegalovirus (HCMV) causes a persistent asymptomatic infection in healthy individuals and possesses unexpected dangers to newborn babies, immunocompromised people, and organ transplant recipients because of stealth transmission. Thus, an early and accurate diagnosis of HCMV infection is crucial for prevention of unexpected transmission and progression of the severe diseases. The standard method of HCMV diagnosis depends on serology, antigen test, and polymerase chain reaction-based nucleic acid detection, which have advantages for each target molecule. However, the serological test for an antibody is an indirect method assuming the past virus infection, and antigen and viral nucleic acid testing demand laborious, complex multistep procedures for direct virus detection. Herein, we present an alternative simple and facile fluorometric biosensor composed of a graphene oxide nanocolloid and fluorescent peptide nucleic acid (PNA) probe to detect the HCMV infection by simply monitoring the virally encoded microRNA as a new biomarker of lytic virus infection. We verify the sensing of HCMV-derived microRNA accumulated within 72 h after HCMV infection and examine the diagnosis of HCMV in living cells. We proceed with the time course and concentration-dependent investigation of hcmv-miRNA sensing in living cells as a direct method of HCMV detection at the molecular level on the basis of an intracellular hcmv-miRNA expression profile and graphene oxide nanocolloid-based simple diagnostic platform. The fluorometric biosensor enables the sequence-specific binding to the target HCMV miRNAs in HCMV-infected fibroblasts and shows the quantitative detection capability of HCMV infection to be as low as 4.15 × 105 immunofluorescence focus unit (IFU)/mL of the virus titer at 48 h post-infection with picomolar sensitivity for HCMV miRNA.


Asunto(s)
Infecciones por Citomegalovirus , MicroARNs , Citomegalovirus/genética , Infecciones por Citomegalovirus/diagnóstico , Humanos , Lactante , Recién Nacido , MicroARNs/genética , Técnicas de Amplificación de Ácido Nucleico , Reacción en Cadena de la Polimerasa
16.
Nat Commun ; 12(1): 880, 2021 02 09.
Artículo en Inglés | MEDLINE | ID: mdl-33563981

RESUMEN

L1 retrotransposons can pose a threat to genome integrity. The host has evolved to restrict L1 replication. However, mechanisms underlying L1 propagation out of the host surveillance remains unclear. Here, we propose an evolutionary survival strategy of L1, which exploits RNA m6A modification. We discover that m6A 'writer' METTL3 facilitates L1 retrotransposition, whereas m6A 'eraser' ALKBH5 suppresses it. The essential m6A cluster that is located on L1 5' UTR serves as a docking site for eukaryotic initiation factor 3 (eIF3), enhances translational efficiency and promotes the formation of L1 ribonucleoprotein. Furthermore, through the comparative analysis of human- and primate-specific L1 lineages, we find that the most functional m6A motif-containing L1s have been positively selected and became a distinctive feature of evolutionarily young L1s. Thus, our findings demonstrate that L1 retrotransposons hijack the RNA m6A modification system for their successful replication.


Asunto(s)
Adenosina/análogos & derivados , Evolución Molecular , Elementos de Nucleótido Esparcido Largo/genética , ARN/metabolismo , Regiones no Traducidas 5' , Adenosina/genética , Adenosina/metabolismo , Desmetilasa de ARN, Homólogo 5 de AlkB/metabolismo , Animales , Células HeLa , Humanos , Metilación , Metiltransferasas/metabolismo , Primates/clasificación , Primates/genética , Biosíntesis de Proteínas , ARN/química , Ribonucleoproteínas/metabolismo
17.
PLoS Pathog ; 4(8): e1000123, 2008 Aug 08.
Artículo en Inglés | MEDLINE | ID: mdl-18688275

RESUMEN

Human cytomegalovirus (HCMV) US6 glycoprotein inhibits TAP function, resulting in down-regulation of MHC class I molecules at the cell surface. Cells lacking MHC class I molecules are susceptible to NK cell lysis. HCMV expresses UL18, a MHC class I homolog that functions as a surrogate to prevent host cell lysis. Despite a high level of sequence and structural homology between UL18 and MHC class I molecules, surface expression of MHC class I, but not UL18, is down regulated by US6. Here, we describe a mechanism of action by which HCMV UL18 avoids attack by the self-derived TAP inhibitor US6. UL18 abrogates US6 inhibition of ATP binding by TAP and, thereby, restores TAP-mediated peptide translocation. In addition, UL18 together with US6 interferes with the physical association between MHC class I molecules and TAP that is required for optimal peptide loading. Thus, regardless of the recovery of TAP function, surface expression of MHC class I molecules remains decreased. UL18 represents a unique immune evasion protein that has evolved to evade both the NK and the T cell immune responses.


Asunto(s)
Proteínas de la Cápside/inmunología , Infecciones por Citomegalovirus/inmunología , Citomegalovirus/inmunología , Células Asesinas Naturales/inmunología , Proteínas de Unión al ARN/inmunología , Linfocitos T/inmunología , Proteínas Virales/inmunología , Proteínas de la Cápside/metabolismo , Citomegalovirus/metabolismo , Infecciones por Citomegalovirus/metabolismo , Regulación de la Expresión Génica/inmunología , Células HeLa , Antígenos de Histocompatibilidad Clase I/biosíntesis , Antígenos de Histocompatibilidad Clase I/inmunología , Humanos , Células Asesinas Naturales/metabolismo , Proteínas de Transporte de Membrana/inmunología , Proteínas de Transporte de Membrana/metabolismo , Péptidos/inmunología , Péptidos/metabolismo , Transporte de Proteínas/inmunología , Proteínas de Unión al ARN/metabolismo , Linfocitos T/metabolismo , Proteínas Virales/metabolismo
18.
J Occup Environ Hyg ; 5(11): 735-53, 2008 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-18780237

RESUMEN

This study attempted to identify the important factors that affect the performance of a laboratory fume hood and the relationship between the factors and hood performance under various conditions by analyzing and generalizing the results from other studies that quantitatively investigated fume hood performance. A literature search identified 43 studies that were published from 1966 to 2006. For each of those studies, information on the type of test methods used, the factors investigated, and the findings were recorded and summarized. Among the 43 quantitative experimental studies, 21 comparable studies were selected, and then a meta-analysis of the comparable studies was conducted. The exposure concentration variable from the resulting 617 independent test conditions was dichotomized into acceptable or unacceptable using the control level of 0.1 ppm tracer gas. Regression analysis using Cox proportional hazards models provided hood failure ratios for potential exposure determinants. The variables that were found to be statistically significant were the presence of a mannequin/human subject, the distance between a source and breathing zone, and the height of sash opening. In summary, performance of laboratory fume hoods was affected mainly by the presence of a mannequin/human subject, distance between a source and breathing zone, and height of sash opening. Presence of a mannequin/human subject in front of the hood adversely affects hood performance. Worker exposures to air contaminants can be greatly reduced by increasing the distance between the contaminant source and breathing zone and by reducing the height of sash opening. Many other factors can also affect hood performance. Checking face velocity by itself is unlikely to be sufficient in evaluating hood performance properly. An evaluation of the performance of a laboratory fume hood should be performed with a human subject or a mannequin in front of the hood and should address the effects of the activities performed by a hood user.


Asunto(s)
Laboratorios/normas , Ventilación/normas , Contaminantes Ocupacionales del Aire/análisis , Contaminación del Aire Interior/análisis , Contaminación del Aire Interior/prevención & control , Diseño de Equipo , Humanos , Exposición Profesional/análisis , Exposición Profesional/prevención & control , Ventilación/instrumentación
19.
Work ; 61(1): 41-54, 2018.
Artículo en Inglés | MEDLINE | ID: mdl-30223411

RESUMEN

BACKGROUND: Work-related musculoskeletal injuries and disorders (WMSDs) are among the most frequently reported causes of lost or restricted work time in the construction industry. Ergonomics is still a relatively new theme for the construction industry. Understanding of the workers' and managers' knowledge and perception of ergonomic issues in construction can play a critical role to develop and implement effective ergonomic programs and policies. OBJECTIVE: To study the similarities and differences of the workers' and managers' knowledge and perceptions of ergonomics matters in the construction industry. METHODS: A survey questionnaire was developed and distributed to both workers and management personnel employed by sixteen different construction contractors performing various types of construction work. The final questionnaire comprised of a total of forty questions and consisted of four major sections: background, safety and ergonomic programs, injuries and illnesses, and work conditions. RESULTS: Eighty-eight workers and managers completed the survey questionnaire. Nearly all of their employer had a written safety program, while only one third had an ergonomics program. Ergonomics was perceived as relatively less important compared to the safety issues. Managers were more likely to think that management encourages feedback from site employees than were workers. Managers appeared to be more likely to know that their companies have an ergonomic training program or policy than were workers. Workers were more likely to consider to purchase or select the ergonomic hand tools than were managers. Workers and managers alike reported having slight regard for the potential occurrence of a work-related musculoskeletal disorder. CONCLUSIONS: While the construction industry has done an admirable job developing safety programs, it has done far less to develop comprehensive ergonomic programs and policies that would help provide education and guidance to its workers and managers in the industry.


Asunto(s)
Concienciación , Industria de la Construcción , Ergonomía/métodos , Percepción , Adolescente , Adulto , Anciano , Industria de la Construcción/normas , Ergonomía/normas , Femenino , Humanos , Masculino , Persona de Mediana Edad , Grupos Raciales/estadística & datos numéricos , Encuestas y Cuestionarios
20.
Sci Rep ; 8(1): 84, 2018 01 08.
Artículo en Inglés | MEDLINE | ID: mdl-29311560

RESUMEN

The autoimmune disorder Aicardi-Goutières syndrome (AGS) is characterized by a constitutive type I interferon response. SAMHD1 possesses both dNTPase and RNase activities and mutations in SAMHD1 cause AGS; however, how SAMHD1-deficiency causes the type I interferon response in patients with AGS remains unknown. Here, we show that endogenous RNA substrates accumulated in the absence of SAMHD1 act as a major immunogenic source for the type I interferon response. Reconstitution of SAMHD1-negative human cells with wild-type but not RNase-defective SAMHD1 abolishes spontaneous type I interferon induction. We further identify that the PI3K/AKT/IRF3 signaling pathway is essential for the type I interferon response in SAMHD1-deficient human monocytic cells. Treatment of PI3K or AKT inhibitors dramatically reduces the type I interferon signatures in SAMHD1-deficient cells. Moreover, SAMHD1/AKT1 double knockout relieves the type I interferon signatures to the levels observed for wild-type cells. Identification of AGS-related RNA sensing pathway provides critical insights into the molecular pathogenesis of the type I interferonopathies such as AGS and overlapping autoimmune disorders.


Asunto(s)
Estudios de Asociación Genética , Interferón Tipo I/metabolismo , Fosfatidilinositol 3-Quinasas/metabolismo , Proteínas Proto-Oncogénicas c-akt/metabolismo , Proteína 1 que Contiene Dominios SAM y HD/deficiencia , Transducción de Señal , Animales , Línea Celular , Humanos , Factor 3 Regulador del Interferón/metabolismo , Ratones , Monocitos/metabolismo , Mutación , ARN/genética , ARN/metabolismo , Receptor de Interferón alfa y beta/metabolismo , Proteína 1 que Contiene Dominios SAM y HD/genética , Proteína 1 que Contiene Dominios SAM y HD/metabolismo
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