Small molecular weight epigenetic inhibitors modulate the extracellular matrix during pancreatic acinar ductal metaplasia.

The pancreatic ductal adenocarcinoma (PDAC) tumor microenvironment is distinguished by a high degree of fibrosis and inflammation, known as desmoplasia. Desmoplasia increases the stromal deposition and extracellular matrix (ECM) stiffness observed in the tumor microenvironment, contributing to the dampened penetration of pharmacological agents. The molecular and biophysical composition of the ECM during the earliest cellular changes in the development of PDAC, i.e. acinar ductal metaplasia (ADM), has not been extensively explored. We report that the mRNA expression of key protein components of the ECM increases during ADM in p48Cre/+;LSL-KrasG12D (KC) mouse acinar organoids cultured in Matrigel. Treatment of the organoids with small molecular weight epigenetic modulating compounds that inhibit or reverse ADM (largazole, FK228 and chaetocin) dramatically reduced the tissue mRNA expression of collagens, hyaluronan synthase, laminin and fibronectin. The storage moduli, determined by video tracking of fluorescent nanoparticles embedded into the Matrigel, increased during ADM and was reduced following treatment with the epigenetic modulating compounds. We report that the ECM of mouse organoids stiffens during ADM and is further enhanced by the presence of mutant Kras. Moreover, select HDAC and HMT inhibitors reduced the mRNA expression of ECM components and ECM stiffness during inhibition and reversal of ADM, suggesting that these compounds may be useful as adjuvants to enhance the tumor penetration of agents used to treat PDAC.

Magnetophoresis of paramagnetic metal ions in porous media.

We report a numerical investigation of the magnetophoresis of solutions containing paramagnetic metal ions. Using a simulated magnetic field of a superconducting magnet and the convection-diffusion model, we study the transport of transition metal salts through a porous medium domain. In particular, through a detailed comparison of the numerical results of magnetophoretic velocity and ion concentration profiles with prior published experiments, we validate the model. Subsequent to model validation, we perform a systematic analysis of the model parameters on the magnetophoresis of metal ions. Magnetophoresis is quantified with a magnetic Péclet number Pem. Under a non-uniform magnetic field, Pem initially rises, exhibiting a local maximum, and subsequently declines towards a quasi-steady value. Our results show that both the initial and maximum Pem values increase with increasing magnetic susceptibility, initial concentration of metal solutes, and ion cluster size. Conversely, Pem decreases as the porosity of the medium increases. Finally, the adsorption of metal salts onto the porous media surface is modeled through a dimensionless Damkohler number Daad. Our results suggest that the adsorption significantly slows the magnetophoresis and self-diffusion of the paramagnetic metal salts, with a net magnetophoresis velocity dependent on the kinetics and equilibrium adsorption properties of the metal salts. The latter result underscores the crucial role of adsorption in future magnetophoresis research.