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1.
Phys Chem Chem Phys ; 22(13): 7021-7030, 2020 Apr 06.
Artículo en Inglés | MEDLINE | ID: mdl-32191243

RESUMEN

The Adaptive Vibrational Configuration Interaction (A-VCI) algorithm is an iterative process that computes the anharmonic spectrum of a molecule using nested bases to discretize the Hamiltonian operator. For large molecular systems, the size of the discretization space and the computation time quickly become prohibitive. It is therefore necessary to develop new methods to further limit the number of basis functions. Most of the time, the interpretation of an experimental infrared spectrum does not require the calculation of all eigenvalues but only those corresponding to vibrational states with significant intensity. In this paper, a technique that uses infrared intensities is introduced to select a subset of eigenvalues to be precisely calculated. Thus, we build smaller nested bases and reduce both the memory footprint and the computational time. We validate the advantages of this new approach on a well-studied 7-atom molecular system (C2H4O), and we apply it on a larger 10-atom molecule (C4H4N2).

2.
J Chem Phys ; 146(21): 214108, 2017 Jun 07.
Artículo en Inglés | MEDLINE | ID: mdl-28595393

RESUMEN

The adaptive vibrational configuration interaction algorithm has been introduced as a new method to efficiently reduce the dimension of the set of basis functions used in a vibrational configuration interaction process. It is based on the construction of nested bases for the discretization of the Hamiltonian operator according to a theoretical criterion that ensures the convergence of the method. In the present work, the Hamiltonian is written as a sum of products of operators. The purpose of this paper is to study the properties and outline the performance details of the main steps of the algorithm. New parameters have been incorporated to increase flexibility, and their influence has been thoroughly investigated. The robustness and reliability of the method are demonstrated for the computation of the vibrational spectrum up to 3000 cm-1 of a widely studied 6-atom molecule (acetonitrile). Our results are compared to the most accurate up to date computation; we also give a new reference calculation for future work on this system. The algorithm has also been applied to a more challenging 7-atom molecule (ethylene oxide). The computed spectrum up to 3200 cm-1 is the most accurate computation that exists today on such systems.

3.
J Chem Phys ; 144(20): 204123, 2016 May 28.
Artículo en Inglés | MEDLINE | ID: mdl-27250295

RESUMEN

A new variational algorithm called adaptive vibrational configuration interaction (A-VCI) intended for the resolution of the vibrational Schrödinger equation was developed. The main advantage of this approach is to efficiently reduce the dimension of the active space generated into the configuration interaction (CI) process. Here, we assume that the Hamiltonian writes as a sum of products of operators. This adaptive algorithm was developed with the use of three correlated conditions, i.e., a suitable starting space, a criterion for convergence, and a procedure to expand the approximate space. The velocity of the algorithm was increased with the use of a posteriori error estimator (residue) to select the most relevant direction to increase the space. Two examples have been selected for benchmark. In the case of H2CO, we mainly study the performance of A-VCI algorithm: comparison with the variation-perturbation method, choice of the initial space, and residual contributions. For CH3CN, we compare the A-VCI results with a computed reference spectrum using the same potential energy surface and for an active space reduced by about 90%.

4.
Phys Chem Chem Phys ; 17(6): 4168-74, 2015 Feb 14.
Artículo en Inglés | MEDLINE | ID: mdl-25564246

RESUMEN

We report synthesis, characterisation and molecular modelling of a new fluorescent cyclotriveratrylene probe for acetylcholine in aqueous media, with emission around 430 nm thanks to extended conjugation. The probe discriminates acetylcholine from choline, with respective binding constants 540 and 240 M(-1) in PBS buffered saline solution, an order of magnitude improvement over the previous best performance. Dynamic light scattering and transmission electron microscopy show the new probe self-assembles in ca. 5 nm diameter particles in PBS medium. Molecular modelling suggests that the high fluorescence quantum yield of the probe, 20% in aqueous media, is due to features of the molecular arrangement in the nano-particles, contributing both to exposure of the complexation site and to shielding of the fluorescent π system from quenching by water. Titration data for other quaternary ammoniums and modelling indicate that recognition of acetylcholine vs. choline depends on specific electrostatic interactions, and to a lesser extent on exclusion of water by hydrophobic-hydrophilic segregation. Probe-substrate interactions enhance the fluorescence of the probe by shielding against water and by flattening the π system.


Asunto(s)
Acetilcolina/análisis , Calixarenos/química , Colorantes Fluorescentes/química , Tampones (Química) , Colina/análisis , Simulación de Dinámica Molecular , Nanopartículas , Fosfatos , Cloruro de Sodio , Soluciones
5.
J Org Chem ; 79(5): 2148-55, 2014 Mar 07.
Artículo en Inglés | MEDLINE | ID: mdl-24517550

RESUMEN

Matrix photolysis of 2-pyrazinyl azides/tetrazolo[1,5-a]pyrazines generates nitrile ylides 15 via pyrazinylnitrenes 13 and triazacycloheptatetraenes 14. The nitrile ylides 15 are characterized by IR spectroscopy in conjunction with harmonic and anharmonic vibrational frequency calculations. The nitrile ylides exist in the matrices in the Z,Z-conformations in which they are born. Substitution on the nitrile carbon of nitrile ylides has a profound effect on their structure. Even different conformers of the same molecule can have differences up to 200 cm(-1) in the IR absorptions of the ylide moieties. Nitrile ylides 15a and 15b (R = H or Cl, R' = H) have allenic structures (15 Allenic). Nitrile ylide 15c (R = R' = CH3) has a distinctly propargylic structure (15 Propargylic) in the experimentally observed Z,Z-conformation.

6.
J Chem Phys ; 141(24): 244703, 2014 Dec 28.
Artículo en Inglés | MEDLINE | ID: mdl-25554171

RESUMEN

We present first-principle calculations of core-level binding energies for the study of insulating, bulk phase, compounds, based on the Slater-Janak transition state model. Those calculations were performed in order to find a reliable model of the amorphous LixPOyNz solid electrolyte which is able to reproduce its electronic properties gathered from X-ray photoemission spectroscopy (XPS) experiments. As a starting point, Li2PO2N models were investigated. These models, proposed by Du et al. on the basis of thermodynamics and vibrational properties, were the first structural models of LixPOyNz. Thanks to chemical and structural modifications applied to Li2PO2N structures, which allow to demonstrate the relevance of our computational approach, we raise an issue concerning the possibility of encountering a non-bridging kind of nitrogen atoms (=N(-)) in LixPOyNz compounds.

7.
J Chem Phys ; 139(16): 164314, 2013 Oct 28.
Artículo en Inglés | MEDLINE | ID: mdl-24182036

RESUMEN

Methyliminopropadienone MeN=C=C=C=O 1a was generated by flash vacuum thermolysis from four different precursors and isolated in solid argon. The matrix-isolation infrared spectrum is dominated by unusually strong anharmonic effects resulting in complex fine structure of the absorptions due to the NCCCO moiety in the 2200 cm(-1) region. Doubling and tripling of the corresponding absorption bands are observed for phenyliminopropadienone PhN=C=C=C=O 1b and bis(phenylimino)propadiene PhN=C=C=C=NPh 9, respectively. Anharmonic vibrational frequency calculations allow the identification of a number of overtones and combination bands as the cause of the splittings for each molecule. This method constitutes an important tool for the characterization of reactive intermediates and unusual molecules by matrix-isolation infrared spectroscopy.

8.
Nanoscale Adv ; 4(23): 5089-5101, 2022 Nov 22.
Artículo en Inglés | MEDLINE | ID: mdl-36504748

RESUMEN

In the energy storage field, an electrode material must possess both good ionic and electronic conductivities to perform well, especially when high power is needed. In this context, the development of composite electrode materials combining an electrochemically active and good ionic conductor phase with an electronic conductor appears as a perfectly adapted approach to generate a synergetic effect and optimize the energy storage performance. In this work, three layered MnO2 phases with various morphologies (veils, nanoplatelets and microplatelets) were combined with electronic conductor cobalt oxyhydroxides with different platelet sizes (∼20 nm vs. 70 nm wide), to synthesize 6 different composites by exfoliation and restacking processes. The influence of precursors' morphology on the distribution of the Mn and Co objects within the composites was carefully investigated and correlated with the electrochemical performance of the final restacked material. Overall, the best performing restacked composite was obtained by combining MnO2 possessing a veil morphology with the smallest cobalt oxyhydroxide nanoplatelets, leading to the most homogeneous distribution of the Mn and Co objects at the nanoscale. More generally, the aim of this work is to understand how the size and morphology of the precursor building blocks influence their distribution homogeneity within the final composite and to find the most compatible building blocks to reach a homogeneous distribution at the nanoscale.

9.
Materials (Basel) ; 14(9)2021 Apr 29.
Artículo en Inglés | MEDLINE | ID: mdl-33947167

RESUMEN

Nanostructuration is one of the most promising strategies to develop performant electrode materials for energy storage devices, such as hybrid supercapacitors. In this work, we studied the influence of precipitation medium and the use of a series of 1-alkyl-3-methylimidazolium bromide ionic liquids for the nanostructuration of ß(III) cobalt oxyhydroxides. Then, the effect of the nanostructuration and the impact of the different ionic liquids used during synthesis were investigated in terms of energy storage performances. First, we demonstrated that forward precipitation, in a cobalt-rich medium, leads to smaller particles with higher specific surface areas (SSA) and an enhanced mesoporosity. Introduction of ionic liquids (ILs) in the precipitation medium further strongly increased the specific surface area and the mesoporosity to achieve well-nanostructured materials with a very high SSA of 265 m2/g and porosity of 0.43 cm3/g. Additionally, we showed that ILs used as surfactant and template also functionalize the nanomaterial surface, leading to a beneficial synergy between the highly ionic conductive IL and the cobalt oxyhydroxide, which lowers the resistance charge transfer and improves the specific capacity. The nature of the ionic liquid had an important influence on the final electrochemical properties and the best performances were reached with the ionic liquid containing the longest alkyl chain.

10.
Inorg Chem ; 49(20): 9470-8, 2010 Oct 18.
Artículo en Inglés | MEDLINE | ID: mdl-20845921

RESUMEN

Experimental and theoretical studies have been performed to demonstrate the high performance of the novel piezoelectric material GaAsO(4). Hydrothermally grown single crystals of α-quartz phase GaAsO(4) were studied by Brillouin spectroscopy to determine elastic constants. Experimentally obtained values of C(11), C(66), C(33), C(44), C(14) and C(12) are 59.32, 19.12, 103.54, 30.70, 1.7, and 21.1 GPa, respectively. Elastic and piezoelectric tensors were also calculated by a first principles method in this work, leading to a very good agreement with experimental results and confirming the values of elastic components obtained indirectly such as C(14) and the negligible piezoelectric correction for C(11). The thermal behavior of the elastic constant corresponding to the [100] longitudinal L mode (C(11)) was studied up to 1137 K to estimate potential piezoelectric performance. It was found that the thermal behavior is linear up to 1273 K which is just below the thermal decomposition temperature of 1303 K. High thermal stability can be linked to the higher polarizability of large cations Ga and As because of neighboring oxygen atoms. On the basis of thermal behavior, GaAsO(4) is a promising material for high temperature piezoelectric applications.

11.
J Chem Phys ; 132(9): 094501, 2010 Mar 07.
Artículo en Inglés | MEDLINE | ID: mdl-20210399

RESUMEN

Molecular dynamics simulations are performed on the pure silica zeolite silicalite (MFI framework code), maintaining via a new force field both framework flexibility and realistic account of electrostatic interactions with adsorbed water. The force field is similar to the well-known "BKS" model [B. W. H. van Beest et al., Phys. Rev. Lett. 64, 1955 (1990)], but with reduced partial atomic charges and reoptimized covalent bond potential wells. The present force field reproduces the monoclinic to orthorhombic transition of silicalite. The force field correctly represents the hydrophobicity of pure silica silicalite, both the adsorption energy, and the molecular diffusion constants of water. Two types of adsorption, specific and weak unspecific, are predicted on the channel walls and at the channel intersection. We discuss molecular diffusion of water in silicalite, deducing a barrier to crossing between the straight and the zigzag channels. Analysis of the thermal motion shows that at room temperature, framework oxygen atoms incurring into the zeolite channels significantly influence the dynamics of adsorbed water.

12.
ACS Appl Mater Interfaces ; 9(51): 44922-44930, 2017 Dec 27.
Artículo en Inglés | MEDLINE | ID: mdl-29210264

RESUMEN

This article focuses on the surface reactivity of two spinel samples with different stoichiometries and crystal morphologies, namely Li1+xMn2-xO4 with x = 0.05 and 0.10. LiMn2O4 compounds are good candidates as positive electrode of high-power lithium-ion batteries for portable devices. The samples were investigated using both experimental and theoretical approaches. On the experimental point of view, they were characterized in depth from X-ray diffraction, scanning electron microscopy, and X-ray photoelectron spectroscopy (XPS) analyses. Then, the reactivity was investigated through the adsorption of (SO2) gaseous probes, in controlled conditions, followed by XPS characterization. First-principle calculations were conducted simultaneously to investigate the electronic properties and the reactivity of relevant surfaces of an ideal LiMn2O4 material. The results allow us to conclude that the reactivity of the samples is dominated by an acido-basic reactivity and the formation of sulfite species. Nonetheless, on the x = 0.05 sample, both sulfite and sulfate species are obtained, the later, in lesser extent, corresponding to a redox reactivity. Combining experimental and theoretical results, this redox reactivity could be associated with the presence of a larger quantity of Mn4+ cations on the last surface layers of the material linked to a specific surface orientation.

13.
ACS Appl Mater Interfaces ; 9(50): 44222-44230, 2017 Dec 20.
Artículo en Inglés | MEDLINE | ID: mdl-29188720

RESUMEN

This article deals with the surface reactivity of (001)-oriented Li2MnO3 crystals investigated from a multitechnique approach combining material synthesis, X-ray photoemission spectroscopy (XPS), scanning electron microscopy, Auger electron spectroscopy, and first-principles calculations. Li2MnO3 is considered as a model compound suitable to go further in the understanding of the role of tetravalent manganese atoms in the surface reactivity of layered lithium oxides. The knowledge of the surface properties of such materials is essential to understand the mechanisms involved in parasitic phenomena responsible for early aging or poor storage performances of lithium-ion batteries. The surface reactivity was probed through the adsorption of SO2 gas molecules on large Li2MnO3 crystals to be able to focus the XPS beam on the top of the (001) surface. A chemical mapping and XPS characterization of the material before and after SO2 adsorption show in particular that the adsorption is homogeneous at the micro- and nanoscale and involves Mn reduction, whereas first-principles calculations on a slab model of the surface allow us to conclude that the most energetically favorable species formed is a sulfate with charge transfer implying reduction of Mn.

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