Transport of E. coli in Aquifer Sediments of Bangladesh: Implications for Widespread Microbial Contamination of Groundwater.

Fecal bacteria are frequently found at much greater distances than would be predicted by laboratory studies, indicating that improved models that incorporate more complexity are might be needed to explain the widespread contamination of many shallow aquifers. In this study, laboratory measurements of breakthrough and retained bacteria in columns of intact and repacked sediment cores from Bangladesh were fit using a two-population model with separate reversible and irreversible attachment sites that also incorporated bacterial decay rates. Separate microcosms indicated an average first order decay rate of 0.03 log10 / day for free bacteria in both the liquid phase and bacteria attached to the solid phase. Although two-thirds of the column results could be well fit with a dual deposition site, single population model, fitting of one third of the results required a two-population model with a high irreversible attachment rate (between 5 and 60 hr-1) for one population of bacteria and a much lower rate (from 5 hr-1 to essentially zero) for the second. Inferred attachment rates for the reversible sites varied inversely with grain size (varying from 1 - 20 hr-1 for grain sizes between 0.1 and 0.3 mm) while reversible detachment rates were found to be nearly constant (approximately 0.5 hr-1). Field simulations based on the fitted two-population model parameters predict only a two-fold reduction in fecal source concentration over a distance of 10 m, determined primarily by the decay rate of the bacteria. The existence of a secondary population of bacteria with a low attachment rate might help explain the observed widespread contamination of tubewell water with E. coli at the field site where the cores were collected, as well as other similar sites.

Muscle plasticity: comparison of a 30-Hz burst with 10-Hz continuous stimulation.

The changes in the contractile properties induced by a 30-Hz phasic stimulation paradigm were measured and compared with the changes induced by a 10-Hz continuous stimulation paradigm. The study was performed on the tibialis anterior muscles of cats with one paradigm applied to one hindlimb muscle and the other to the contralateral limb. Both hindlimb muscles received the same number of stimuli in a day, making the average stimulation frequency 10 Hz. Two periods of daily stimulation were studied, 8 and 24 h/day. Muscles stimulated at 30 Hz produced greater overall tetanic tension and, during a prolonged stimulation test, exerted a greater mean tension than muscles stimulated at 10 Hz (50 and 32% increase for animals stimulated for 8 and 24 h/day, respectively). Muscle mass was least reduced and fewer pathological abnormalities were observed in the muscles stimulated at 30 Hz. There were no apparent differences in the histochemistry or biochemistry between muscles stimulated at 10 and 30 Hz, which could account for these differences in muscle properties. These results indicate the 30-Hz paradigm may be better suited than 10 Hz continuous stimulation for applications requiring sustained muscle tension such as correction of scoliosis or muscle conditioning for motor prostheses.

Factors affecting the accuracy of the boundary element method in the forward problem--I: Calculating surface potentials.

A comprehensive review of factors affecting the accuracy of the boundary element method (BEM) for calculating surface potentials is presented. A relative-error statistic is developed which is only sensitive to calculation errors that could affect the inverse solution for source position, and insensitive to errors that only affect the solution for source strength. The factors considered in this paper are: numerical approximations intrinsic to the BEM, such as constant-potential versus linear-potential basis functions and sharp-edged versus smooth-surfaced volumes; aspects of the volume conductor including the volume shape, density of surface elements, and element shape; source position and orientation; and effects of "refinements" in the numerical methods. The effects of these factors are considered in both smooth-shaped (spheres and spheroids) and sharp-edged (cubes) volume conductors. This represents the first attempt to assess the effects of many of these factors pertaining to the numerical methods commonly used in fields such as electrocardiography (ECG) and electroencephalography (EEG). Strategies for obtaining the most accurate solutions are presented.

A complete linear discretization for calculating the magnetic field using the boundary element method.

An analytic solution is derived for the magnetic field generated by current sources located in a piecewise homogeneous volume conductor. A linear discretization approach is used, whereby the surface potential is assumed to be a piecewise linear function over each tessellated surface defining the regions of differing conductivity. The magnetic field is shown to be a linear combination of vector functions which are strictly dependent on the geometry of the problem, the surface tesselation, and the observation point.

Effect of surface boundary on neuronal magnetic stimulation.

The effect of the surface boundary between free space and a conducting medium on the excitation properties of neurons by magnetic fields are analyzed. The electric field and the spatial derivative of the induced field generated by a coil mounted both parallel and perpendicular to the surface of a semi-infinite conducting medium were calculated using the method of images. An imaginary axon is located in the same relative position from the coil in both configurations and the excitation properties are compared. The calculations are expressed in terms of the activating function for the electrical stimulation of axons. The calculations indicate that the activating function for magnetic stimulation is biphasic as opposed to triphasic for electrical stimulation. The large spatial extent of the magnetically induced electric field compared to the electric field generated by point source electrode suggests a different mode of excitation for neuronal structures in the CNS. The field distribution have been verified experimentally and are important for the understanding of the mechanisms of magnetic stimulation of neural tissue.

Microbial analysis of soil and groundwater from a gasworks site and comparison with a sequenced biological reactive barrier remediation process.

AIMS: To investigate the distribution of a polymicrobial community of biodegradative bacteria in (i) soil and groundwater at a former manufactured gas plant (FMGP) site and (ii) in a novel SEquential REactive BARrier (SEREBAR) bioremediation process designed to bioremediate the contaminated groundwater. METHODS AND RESULTS: Culture-dependent and culture-independent analyses using denaturing gradient gel electrophoresis (DGGE) and polymerase chain reaction (PCR) for the detection of 16S ribosomal RNA gene and naphthalene dioxygenase (NDO) genes of free-living (planktonic groundwater) and attached (soil biofilm) samples from across the site and from the SEREBAR process was applied. Naphthalene arising from groundwater was effectively degraded early in the process and the microbiological analysis indicated a dominant role for Pseudomonas and Comamonas in its degradation. The microbial communities appeared highly complex and diverse across both the sites and in the SEREBAR process. An increased population of naphthalene degraders was associated with naphthalene removal. CONCLUSION: The distribution of micro-organisms in general and naphthalene degraders across the site was highly heterogeneous. Comparisons made between areas contaminated with polycyclic aromatic hydrocarbons (PAH) and those not contaminated, revealed differences in the microbial community profile. The likelihood of noncultured bacteria being dominant in mediating naphthalene removal was evident. SIGNIFICANCE AND IMPACT OF THE STUDY: This work further emphasizes the importance of both traditional and molecular-based tools in determining the microbial ecology of contaminated sites and highlights the role of noncultured bacteria in the process.