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1.
Biochim Biophys Acta ; 1844(5): 874-83, 2014 May.
Artículo en Inglés | MEDLINE | ID: mdl-24361552

RESUMEN

This article describes the principles of marker research with prospective studies along with examples for diagnostic tumor markers. A plethora of biomarkers have been claimed as useful for the early detection of cancer. However, disappointingly few biomarkers were approved for the detection of unrecognized disease, and even approved markers may lack a sound validation phase. Prospective studies aimed at the early detection of cancer are costly and long-lasting and therefore the bottleneck in marker research. They enroll a large number of clinically asymptomatic subjects and follow-up on incident cases. As invasive procedures cannot be applied to collect tissue samples from the target organ, biomarkers can only be determined in easily accessible body fluids. Marker levels increase during cancer development, with samples collected closer to the occurrence of symptoms or a clinical diagnosis being more informative than earlier samples. Only prospective designs allow the serial collection of pre-diagnostic samples. Their storage in a biobank upgrades cohort studies to serve for both, marker discovery and validation. Population-based cohort studies, which may collect a wealth of data, are commonly conducted with just one baseline investigation lacking serial samples. However, they can provide valuable information about factors that influence the marker level. Screening programs can be employed to archive serial samples but require significant efforts to collect samples and auxiliary data for marker research. Randomized controlled trials have the highest level of evidence in assessing a biomarker's benefit against usual care and present the most stringent design for the validation of promising markers as well as for the discovery of new markers. In summary, all kinds of prospective studies can benefit from a biobank as they can serve as a platform for biomarker research. This article is part of a Special Issue entitled: Biomarkers: A Proteomic Challenge.


Asunto(s)
Biomarcadores de Tumor/análisis , Investigación Biomédica , Detección Precoz del Cáncer , Proteínas de Neoplasias/metabolismo , Neoplasias/diagnóstico , Proteómica/métodos , Humanos , Neoplasias/metabolismo , Estudios Prospectivos , Proyectos de Investigación
2.
Pneumologie ; 68(11): 719-26, 2014 Nov.
Artículo en Alemán | MEDLINE | ID: mdl-25003906

RESUMEN

Molecular biomarkers are becoming increasingly significant in the workup of lung carcinoma patients. They assist in diagnosis, selecting the most adequate therapy and determining prognosis. Obtaining blood based biomarkers or volatile markers in exhaled breath may provide a less invasive method in the future. For the time being, bronchoscopy is still the method of choice to obtain specimen and assess tissue based biomarkers. The techniques how specimen are collected and processed for analysis are of paramount importance.


Asunto(s)
Biomarcadores de Tumor/metabolismo , Bronquios/metabolismo , Broncoscopía/métodos , Neoplasias Pulmonares/diagnóstico , Neoplasias Pulmonares/metabolismo , Proteínas de Neoplasias/metabolismo , Humanos , Neoplasias Pulmonares/terapia , Cuidados Preoperatorios/métodos , Reproducibilidad de los Resultados , Sensibilidad y Especificidad
3.
Arch Toxicol ; 85(3): 185-92, 2011 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-20737138

RESUMEN

The aim of the study is to examine the cancer-predictive values of SMRP (soluble mesothelin-related peptides), CA125, and CYFRA21-1 as potential tumor markers for lung cancer and malignant mesothelioma in a cohort of workers formerly exposed to asbestos. A voluntary surveillance program has been established for German workers with former asbestos exposure. A subgroup of 626 subjects with a mean age of 63 years (range 53-70 years) at baseline was enrolled in an extended health examination program with high-resolution computer tomography (HRCT) of the chest and blood drawing between 1993 and 1997. Serum concentrations of SMRP, CA125, and CYFRA21-1 were measured in archived serum samples in 2005 and 2006. A mortality follow-up was conducted through 2007. So far, 12 cases with lung cancer and 20 cases with malignant mesothelioma have been observed in this cohort. The average time between sample collection and diagnosis was 4.7 years. Analyzed biomarkers showed low sensitivities (5-25%) and positive predictive values (4-30%) for both cancer sites. Marker combinations resulted in sensitivities between 5 and 50% and positive predictive values ranging from 3 to 14%. Even in those cases, where biomarker concentrations were available within 36 months before diagnosis, no trend for increasing biomarker levels was observed. The analyzed tumor markers were characterized by high specificities, but low sensitivities. SMRP, CA125, and CYFRA21-1 alone or in combination were less suitable to serve as predictors for the diagnosis of lung cancer or malignant mesothelioma. However, a prospective study with annual sampling might reveal a better predictive value of these markers.


Asunto(s)
Amianto/efectos adversos , Biomarcadores de Tumor/sangre , Neoplasias Pulmonares/diagnóstico , Mesotelioma/diagnóstico , Neoplasias Pleurales/diagnóstico , Anciano , Antígenos de Neoplasias/sangre , Antígeno Ca-125/sangre , Estudios de Cohortes , Femenino , Proteínas Ligadas a GPI/sangre , Humanos , Queratina-19/sangre , Neoplasias Pulmonares/mortalidad , Neoplasias Pulmonares/patología , Masculino , Mesotelina , Mesotelioma/mortalidad , Mesotelioma/patología , Persona de Mediana Edad , Neoplasias Pleurales/mortalidad , Neoplasias Pleurales/patología , Valor Predictivo de las Pruebas , Estudios Prospectivos , Sensibilidad y Especificidad
4.
Occup Environ Med ; 65(3): 191-6, 2008 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-17881467

RESUMEN

OBJECTIVES: To examine the risk of wood dust and chemical exposures for adenocarcinoma of the nasal cavity and paranasal sinuses (ADCN) among German wood workers. METHODS: An industry-based case-control study with 86 male ADCN cases and 204 controls was conducted in the German wood-working industries. Cumulative and average wood-dust exposure was quantified with a job-exposure matrix based on wood-dust measurements at recent and historical workplaces. Probabilities of exposure to wood preservatives, stains, varnishes, and formaldehyde were semi-quantitatively rated. Odds ratios and 95% confidence intervals were calculated with logistic regression analysis conditional on age and adjusted for smoking and other factors. For estimating the risks of either wood dust or chemical additives, the authors additionally adjusted for the corresponding co-exposure. RESULTS: ADCN occurred relatively more frequently among wood workers that had ever worked as cabinet makers or joiners (OR 2.96, 95% CI 1.46 to 6.01) than as saw millers (OR 0.15, 95% CI 0.03 to 0.68). Average exposure to inhalable wood dust >/=5 mg/m(3) was associated with a high risk (OR 48.47, 95% CI 13.30 to 176.63) compared to levels below 3.5 mg/m(3). Assuming 40 years of exposure under these concentrations, the corresponding OR was 4.20 (95% CI 1.69 to 10.43). Exposure between 3.5 and 5 mg/m(3) was also found to pose a risk (OR 10.54, 95% CI 3.34 to 33.27). Exposure to pigment stains before 1970 was associated with an increased risk (OR 3.03; 95% CI 1.11 to 8.26). No significant associations were estimated for wood preservatives, varnishes, and formaldehyde. CONCLUSIONS: The authors found an elevated ADCN risk for exposure to inhalable wood dust above 3.5 mg/m(3). The rareness of the disease does not allow the exclusion of risk below that concentration. For pigment stains, there is evidence for an association of historical exposure with the development of ADCN in German wood workers.


Asunto(s)
Adenocarcinoma/epidemiología , Industrias , Neoplasias Nasales/epidemiología , Enfermedades Profesionales/epidemiología , Exposición Profesional , Madera , Adulto , Factores de Edad , Anciano , Anciano de 80 o más Años , Contaminantes Ocupacionales del Aire , Estudios de Casos y Controles , Polvo , Alemania , Humanos , Exposición por Inhalación , Modelos Logísticos , Masculino , Persona de Mediana Edad , Oportunidad Relativa , Pintura , Neoplasias de los Senos Paranasales/epidemiología , Medición de Riesgo/métodos , Fumar/efectos adversos
5.
PLoS One ; 13(5): e0195716, 2018.
Artículo en Inglés | MEDLINE | ID: mdl-29851970

RESUMEN

BACKGROUND: Lung cancer is the major cause of cancer-related deaths worldwide. Differential diagnosis can be difficult, especially when only small samples are available. Epigenetic changes are frequently tissue-specific events in carcinogenesis and hence may serve as diagnostic biomarkers. MATERIAL AND METHODS: 138 representative formalin-fixed, paraffin-embedded (FFPE) tissues (116 lung cancer cases and 22 benign controls) were used for targeted DNA methylation analysis via pyrosequencing of ten literature-derived methylation markers (APC, CDH1, CDKN2A, EFEMP1, FHIT, L1RE1, MGMT, PTEN, RARB, and RASSF1). Methylation levels were analyzed with the Classification and Regression Tree Algorithm (CART), Conditional Interference Trees (ctree) and ROC. Validation was performed with additional 27 lung cancer cases and 38 benign controls. TCGA data for 282 lung cancer cases was included in the analysis. RESULTS: CART and ctree analysis identified the combination of L1RE1 and RARB as well as L1RE1 and RASSF1 as independent methylation markers with high discriminative power between tumor and benign tissue (for each combination, 91% specificity and 100% sensitivity). L1RE1 methylation associated significantly with tumor type and grade (p<0.001) with highest methylation in the control group. The opposite was found for RARB (p<0.001). RASSF1 methylation increased with tumor type and grade (p<0.001) with strongest methylation in neuroendocrine tumors (NET). CONCLUSION: Hypomethylation of L1RE1 is frequent in tumors compared to benign controls and associates with higher grade, whereas increasing methylation of RARB is an independent marker for tumors and higher grade. RASSF1 hypermethylation was frequent in tumors and most prominent in NET making it an auxiliary marker for separation of NSCLC and NET. L1RE1 in combination with either RARB or RASSF1 could function as biomarkers for separating lung cancer and non-cancerous tissue and could be useful for samples of limited size such as biopsies.


Asunto(s)
Biomarcadores de Tumor/genética , Carcinoma de Pulmón de Células no Pequeñas/diagnóstico , Metilación de ADN , Neoplasias Pulmonares/diagnóstico , Proteínas Nucleares/genética , Proteínas de Unión al ARN/genética , Receptores de Ácido Retinoico/genética , Proteínas Supresoras de Tumor/genética , Adenocarcinoma/diagnóstico , Adenocarcinoma/genética , Adulto , Anciano , Carcinoma de Células Grandes/diagnóstico , Carcinoma de Células Grandes/genética , Carcinoma de Pulmón de Células no Pequeñas/genética , Carcinoma de Células Escamosas/diagnóstico , Carcinoma de Células Escamosas/genética , Estudios de Casos y Controles , Diagnóstico Diferencial , Epigénesis Genética , Femenino , Humanos , Neoplasias Pulmonares/genética , Masculino , Persona de Mediana Edad , Regiones Promotoras Genéticas
6.
Toxicol Lett ; 263: 68-75, 2016 Nov 30.
Artículo en Inglés | MEDLINE | ID: mdl-27565850

RESUMEN

Accumulation of macrophages and neutrophil granulocytes in the lung are key events in the inflammatory response to inhaled particles. The present study aims at the time course of chemotaxis in vitro in response to the challenge of various biopersistent particles and its functional relation to the transcription of inflammatory mediators. NR8383 rat alveolar macrophages were challenged with particles of coarse quartz, barium sulfate, and nanosized silica for one, four, and 16h and with coarse and nanosized titanium dioxide particles (rutile and anatase) for 16h only. The cell supernatants were used to investigate the chemotaxis of unexposed NR8383 macrophages. The transcription of inflammatory mediators in cells exposed to quartz, silica, and barium sulfate was analyzed by quantitative real-time PCR. Challenge with quartz, silica, and rutile particles induced significant chemotaxis of unexposed NR8383 macrophages. Chemotaxis caused by quartz and silica was accompanied by an elevated transcription of CCL3, CCL4, CXCL1, CXCL3, and TNFα. Quartz exposure showed an earlier onset of both effects compared to the nanosized silica. The strength of this response roughly paralleled the cytotoxic effects. Barium sulfate and anatase did not induce chemotaxis and barium sulfate as well caused no elevated transcription. In conclusion, NR8383 macrophages respond to the challenge with inflammatory particles with the release of chemotactic compounds that act on unexposed macrophages. The kinetics of the response differs between the various particles.


Asunto(s)
Contaminantes Atmosféricos/toxicidad , Quimiocinas/metabolismo , Quimiotaxis/efectos de los fármacos , Citocinas/metabolismo , Macrófagos Alveolares/efectos de los fármacos , Macrófagos Alveolares/metabolismo , Material Particulado/toxicidad , Animales , Sulfato de Bario/toxicidad , Línea Celular , Ensayos de Migración de Macrófagos , Perfilación de la Expresión Génica , Cinética , Nanopartículas/toxicidad , Cuarzo/toxicidad , Ratas , Dióxido de Silicio/toxicidad , Titanio/toxicidad
7.
J Mol Diagn ; 2(4): 209-16, 2000 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-11232111

RESUMEN

Malignant mesotheliomas are tumors known for their extensive heterogeneity. Apart from the three classical patterns, predominantly epithelioid, sarcomatoid, and biphasic, some rare variants do exist. In some cases, one can find uncommon additional mesodermal tumor components. These tumors have previously been called "mesodermomas" and, like regular mesotheliomas, are usually associated with a previous asbestos exposure. We examined eight cases of mesodermomas by light microscopy, immunohistochemistry and comparative genomic hybridization (CGH). Besides biphasic and epithelioid areas, unusual epithelial, chondroid, osseous, or even angioblastic elements may be found to varying degrees. Immunohistochemical analysis shows similar staining results as with regular mesotheliomas. CGH reveals a high number of chromosomal imbalances (16.5 per case; range, 11-27). In 10 classical biphasic mesotheliomas that served as a control, defects of comparable number and severity could not be detected (8 per case; range, 2-16). The most frequent defects of mesodermomas (losses on 1p, 4pq, 9p, 13q, 14q, and gains on 1q and 15q), however, could also be found in mesotheliomas of the classical type. Thus, our results support the classification of the so-called mesodermomas as a separate tumor subgroup while maintaining the relationship to the classical mesotheliomas. Therefore, we propose to use the term mesodermoma for this subgroup.


Asunto(s)
Aberraciones Cromosómicas , Mesotelioma/genética , Neoplasias Pleurales/genética , Anciano , Mapeo Cromosómico , Femenino , Humanos , Inmunohistoquímica , Masculino , Mesotelioma/química , Mesotelioma/diagnóstico , Mesotelioma/patología , Persona de Mediana Edad , Hibridación de Ácido Nucleico , Neoplasias Pleurales/química , Neoplasias Pleurales/diagnóstico , Neoplasias Pleurales/patología
8.
Virchows Arch ; 437(3): 248-55, 2000 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-11037344

RESUMEN

Solitary fibrous tumours (SFTs) of the pleura, in contrast to malignant mesothelioma, occur independently of previous asbestos exposure. They are benign tumours, but may recur if the stalk to the adjacent pleural or lung tissue remains in situ during surgical removal. The molecular pathology of SFTs is largely unknown. We used comparative genomic hybridisation (CGH) to characterise 12 localised SFTs and 12 predominantly sarcomatoid mesotheliomas. Fifty-eight percent of the investigated SFTs did not show any chromosomal imbalances. The most frequent defects were losses on chromosome arms 13q (33%), 4q and 21q (17% each). Significant gains were seen at chromosome 8 and at 15q in two cases each. There was no correlation between tumour size and molecular pathology findings. In contrast, 75% of the mesotheliomas carried chromosomal defects. On average, the mesotheliomas showed over three times as many defects per tumour as the SFTs. Localisation of several frequent losses and gains were similar to those of the SFTs. Therefore, in individual cases, a clear distinction between SFTs and sarcomatoid mesotheliomas is not possible based on CGH analysis alone. Further molecular characterisation of this rare tumour entity will be necessary to elucidate possible genes involved in early tumorigenesis.


Asunto(s)
Aberraciones Cromosómicas , Neoplasias Pleurales/genética , Anciano , Anciano de 80 o más Años , Femenino , Humanos , Inmunohistoquímica , Masculino , Mesotelioma/genética , Persona de Mediana Edad , Hibridación de Ácido Nucleico
9.
Toxicol Lett ; 151(1): 255-66, 2004 Jun 15.
Artículo en Inglés | MEDLINE | ID: mdl-15177661

RESUMEN

Modern toxicology investigates a wide array of both old and new health hazards. Priority setting is needed to select agents for research from the plethora of exposure circumstances. The changing societies and a growing fraction of the aged have to be taken into consideration. A precise exposure assessment is of importance for risk estimation and regulation. Toxicology contributes to the exploration of pathomechanisms to specify the exposure metrics for risk estimation. Combined effects of co-existing agents are not yet sufficiently understood. Animal experiments allow a separate administration of agents which can not be disentangled by epidemiological means, but their value is limited for low exposure levels in many of today's settings. As an experimental science, toxicology has to keep pace with the rapidly growing knowledge about the language of the genome and the changing paradigms in cancer development. During the pioneer era of assembling a working draft of the human genome, toxicogenomics has been developed. Gene and pathway complexity have to be considered when investigating gene-environment interactions. For a best conduct of studies, modern toxicology needs a close liaison with many other disciplines like epidemiology and bioinformatics.


Asunto(s)
Exposición a Riesgos Ambientales , Métodos Epidemiológicos , Toxicología/métodos , Animales , Ecosistema , Genómica/métodos , Genómica/tendencias , Humanos , Medición de Riesgo/métodos , Toxicología/tendencias
10.
Aktuelle Urol ; 42(2): 128-34, 2011 Mar.
Artículo en Alemán | MEDLINE | ID: mdl-21437837

RESUMEN

OBJECTIVE: Bladder cancer responds favourably to treatment and has a good survival rate, provided it is diagnosed at an early stage. Established methods exist for the early detection, however, their specificity and positive predictive value are not yet satisfactory. Innovative markers have been proposed, but still require validation in prospective studies. We provide a literature-based short overview on the currently available and some proposed markers for the early detection of bladder cancer and evaluate the need for validation in further studies. We further provide some first results of such a recently finished study in an occupational setting. MATERIAL AND METHODS: We conducted a prospective screening study over seven years in 1610 males with former occupational exposure to carcinogenic aromatic amines. Annual bladder cancer screening according to statutory requirements was offered. In addition to the regularly performed check for hematuria and urine cytology, the markers NMP22, UroVysion™ and survivin were performed in voided urine samples of the participants. Positive findings (not for survivin) were further followed through urethrocystoscopy. RESULTS AND CONCLUSIONS: A total of 7219 urine samples were screened. During the study period 16 incidental and 4 recurrent bladder tumours, thereof three papillomas, occurred in a total of 19 participants. 14 out of twenty tumours were marker-positive, and all but two were early stage findings. Cell-based markers (cytology, UroVysion™) und molecular markers (NMP22, survivin) were largely complementary, thus acting as a "multi-marker panel". Eight of the tumours were identified by a positive cytology. Six tumours were not detected by any of the tumour markers. The results will be further evaluated through the inclusion of confounding factors, which have so far rarely been examined in other studies. This may lead to the development of tiered diagnostic strategies with the aim to reduce the number of invasive diagnostic procedures in the future.


Asunto(s)
Biomarcadores de Tumor/orina , Detección Precoz del Cáncer/métodos , Enfermedades Profesionales/diagnóstico , Enfermedades Profesionales/orina , Neoplasias de la Vejiga Urinaria/diagnóstico , Neoplasias de la Vejiga Urinaria/orina , Adulto , Anciano , Anciano de 80 o más Años , Compuestos de Anilina , Hematuria/inducido químicamente , Hematuria/diagnóstico , Hematuria/orina , Humanos , Hibridación Fluorescente in Situ , Hallazgos Incidentales , Proteínas Inhibidoras de la Apoptosis/orina , Masculino , Persona de Mediana Edad , Recurrencia Local de Neoplasia/inducido químicamente , Recurrencia Local de Neoplasia/diagnóstico , Recurrencia Local de Neoplasia/patología , Recurrencia Local de Neoplasia/orina , Estadificación de Neoplasias , Proteínas Nucleares/orina , Enfermedades Profesionales/inducido químicamente , Enfermedades Profesionales/patología , Exposición Profesional , Estudios Prospectivos , Sensibilidad y Especificidad , Survivin , Neoplasias de la Vejiga Urinaria/inducido químicamente , Neoplasias de la Vejiga Urinaria/patología , Orina/citología
11.
Pathologe ; 27(2): 99-105, 2006 Mar.
Artículo en Alemán | MEDLINE | ID: mdl-16435096

RESUMEN

The morphological diagnosis of small mesothelial lesions in pleural biopsies is gaining importance in view of more aggressive, multimodal therapeutic options and of medicolegal aspects if a malignant mesothelioma is diagnosed. We present a light microscopically and immunohistochemically based morphological classification for the planning of further clinical follow-up procedures. A reactive mesothelial hyperplasia heals without scars. Mesothelial inclusions in pleuritic scars are common in recurrent pleuritis and must not be confused with an epithelioid component of a desmoplastic mesothelioma. In case of atypical mesothelial proliferations, further diagnostic procedures have to be performed to obtain a clear diagnosis of malignancy. Mesothelioma in situ is the first morphological step in neoplastic mesothelial changes, also with regard to medicolegal aspects for the unambiguous diagnosis of a mesothelioma. Early infiltrative growth is characteristic of so called early mesothelioma. A useful immunohistochemical panel for the differential diagnosis consists of anti-cytokeratin, Ck 5/6, calretinin, EMA and MiB-1, whereas the immunohistochemical detection of telomerase is not helpful.


Asunto(s)
Biomarcadores de Tumor/análisis , Mesotelioma/patología , Neoplasias Pleurales/patología , Lesiones Precancerosas/patología , Carcinoma in Situ/patología , División Celular/fisiología , Transformación Celular Neoplásica/patología , Diagnóstico Diferencial , Humanos , Hiperplasia/patología , Técnicas para Inmunoenzimas , Mesotelioma/diagnóstico , Mesotelioma Quístico/diagnóstico , Mesotelioma Quístico/patología , Estadificación de Neoplasias , Pleura/patología , Neoplasias Pleurales/diagnóstico , Pleuresia/patología , Lesiones Precancerosas/diagnóstico , Telomerasa/análisis
12.
Pathologe ; 26(5): 331-7, 2005 Sep.
Artículo en Alemán | MEDLINE | ID: mdl-16032388

RESUMEN

The case of a soft tissue myoepithelioma is presented including clinicopathologic, ultrastructural, and genetic findings. A 30-year-old male patient suffered from a soft tissue tumor within the deep soft tissues of the right lower leg measuring 13.2 x 8.2 x 9 cm. Histologically, the lesion was diagnosed as a myoepithelioma displaying a lobulated architecture with cords and nests of epithelioid and spindle cells without cytologic atypia lying within a fibromyxoid and partly chondroid matrix; immunohistochemistry was positive for pancytokeratin, S100-protein, calponin and partly for GFAP and EMA. Ultrastructural analysis revealed glycogen deposits and cell-membrane-associated plaque structures, whereas true myofilaments could not be identified (with immunohistochemistry being negative for actin). Using comparative genomic hybridization (CGH), a gain of chromosome Y was detected. A loss on 17p could not be detected unambiguously. However, based on the low resolution of CGH a small loss cannot be excluded. The patient was free of disease 25 months following complete tumor resection. Myoepitheliomas/mixed tumors of deep soft tissue represent rare soft tissue lesions that may reach a considerable size and may mimic other soft tissue tumors or sarcomas. Based on a local relapse rate of approximately 20% according to the literature, a complete resection with thorough follow-up should be recommended.


Asunto(s)
Mioepitelioma/patología , Neoplasias de los Tejidos Blandos/patología , Adulto , Proteínas de Unión al Calcio/metabolismo , ADN de Neoplasias/metabolismo , Proteína Ácida Fibrilar de la Glía/metabolismo , Humanos , Inmunohistoquímica , Pierna , Masculino , Proteínas de Microfilamentos , Mioepitelioma/genética , Mioepitelioma/ultraestructura , Hibridación de Ácido Nucleico , Proteínas S100/metabolismo , Neoplasias de los Tejidos Blandos/genética , Neoplasias de los Tejidos Blandos/ultraestructura , Calponinas
13.
Pathologe ; 26(4): 304-8, 2005 Jul.
Artículo en Alemán | MEDLINE | ID: mdl-15349751

RESUMEN

Molecular methods can complement the classical methods in pathology like macroscopic, histological and immunohistochemical examinations.Comparative genomic hybridization is a cytogenetic method to screen for gains and losses of chromosomal material in tumor cells. This method allows defect studies of archival paraffin-embedded and formalin-fixed tumor material. CGH can detect gains and losses of chromosomal material that are at least 10 to 20 megabases in size. This genome-wide screening method allows to study the cytogenetic relationship between differently located tumors of a patient. To answer the question if these different tumors are metastases of the primary lung tumor or independent primary tumors CGH analysis is a supplementary method that introduces new prospectives.


Asunto(s)
Aberraciones Cromosómicas , Trastornos de los Cromosomas/genética , Cromosomas Humanos , Metástasis de la Neoplasia/genética , Neoplasias/genética , Neoplasias/parasitología , Hibridación de Ácido Nucleico/métodos , Humanos
14.
Proc Natl Acad Sci U S A ; 94(25): 13469-74, 1997 Dec 09.
Artículo en Inglés | MEDLINE | ID: mdl-9391049

RESUMEN

The relationship between the enzymatic and the transcriptional activity of the bifunctional protein pterin-4a-carbinolamine dehydratase/dimerization cofactor for hepatocyte nuclear factor 1 (DCoH) has been elucidated by site-directed mutagenesis. DCoH dimers harbor a binding site for hepatocyte nuclear factor 1 (HNF1), two active centers that bind pterins, and a saddle-shaped surface that resembles nucleic acid binding domains. Two domains of the protein have been selectively targeted to determine if a change in one activity affects the other. No strong correlation has been found, supporting the idea that carbinolamine dehydratase activity is not required for HNF1 binding in vitro or transcriptional coactivation in vivo. Double mutations in the active center, however, influence the in vivo transcriptional activity but not HNF1 binding. This finding suggests that some active center residues also are used during transcription, possibly for binding of another (macro)molecule. Several mutations in the saddle led to a surprising increase in transcription, therefore linking this domain to transcriptional regulation as well. The transcriptional function of DCoH therefore is composed of two parts, HNF1 binding and another contributing effect that involves the active site and, indirectly, the saddle.


Asunto(s)
Proteínas de Unión al ADN , Hidroliasas/metabolismo , Proteínas Nucleares , Factores de Transcripción/metabolismo , Animales , Sitios de Unión/genética , Células CHO , Cricetinae , Dimerización , Factor Nuclear 1 del Hepatocito , Factor Nuclear 1-beta del Hepatocito , Hidroliasas/química , Hidroliasas/genética , Cinética , Modelos Moleculares , Mutagénesis Sitio-Dirigida , Conformación Proteica , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Factores de Transcripción/química , Factores de Transcripción/genética
15.
Pathologe ; 24(4): 303-7, 2003 Jul.
Artículo en Alemán | MEDLINE | ID: mdl-14513278

RESUMEN

According to the 1999 World Health Organisation classification of lung tumors, the classification of neuroendocrine (NE) tumors is solely based on light-microscopic features. Typical and atypical carcinoid tumors are distinguished from large cell (LCNEC) and small cell neuroendocrine carcinomas (SCLC). We used comparative genomic hybridization (CGH) on 50 samples to investigate the cytogenetic relationships between NE tumors. On average, carcinoid tumors showed markedly fewer chromosomal imbalances (1.8/case, 23 cases) than LCNEC (13.3/case, 17 cases) or SCLC (17/case, 10 cases). The frequency of amplicons increased accordingly. Typical carcinoid tumors exhibited significant defects on chromosomes 11 and 13 only. Interestingly, only the frequency of losses on chromosome arm 11q was very similar for all three tumor entities (about 30%). In conclusion, the CGH results support the classification of typical carcinoid tumors as a separate entity in clear distinction from the NE carcinomas.


Asunto(s)
Mapeo Cromosómico , Neoplasias Pulmonares/genética , Tumores Neuroendocrinos/genética , Carcinoma de Células Grandes/clasificación , Carcinoma de Células Grandes/genética , Carcinoma de Células Grandes/patología , Carcinoma de Células Grandes/cirugía , Carcinoma de Células Pequeñas/clasificación , Carcinoma de Células Pequeñas/genética , Carcinoma de Células Pequeñas/patología , Humanos , Cariotipificación , Neoplasias Pulmonares/clasificación , Neoplasias Pulmonares/patología , Neoplasias Pulmonares/cirugía , Tumores Neuroendocrinos/clasificación , Tumores Neuroendocrinos/patología , Tumores Neuroendocrinos/cirugía , Hibridación de Ácido Nucleico/métodos
16.
Proc Natl Acad Sci U S A ; 92(26): 12384-8, 1995 Dec 19.
Artículo en Inglés | MEDLINE | ID: mdl-8618906

RESUMEN

The characterization of 4a-carbinolamine dehydratase with the enzymatically synthesized natural substrate revealed non-Michaelis-Menten kinetics. A Hill coefficient of 1.8 indicates that the dehydratase exists as a multisubunit enzyme that shows cooperativity. A mild form of hyperphenylalaninemia with high 7-biopterin levels has been linked to mutations in the human 4a-carbinolamine dehydratase gene. We have now cloned and expressed two mutant forms of the protein based on a patient's DNA sequences. The kinetic parameters of the mutant C82R reveal a 60% decrease in Vmax but no change in Km (approximately 5 microM), suggesting that the cysteine residue is not involved in substrate binding. Its replacement by arginine possibly causes a conformational change in the active center. Like the wild-type enzyme, this mutant is heat stable and forms a tetramer. The susceptibility to proteolysis of C82R, however, is markedly increased in vitro compared with the wild-type protein. We have also observed a decrease in the expression levels of C82R protein in transfected mammalian cells, which could be due to proteolytic instability. The 18-amino acid-truncated mutant GLu-87--> termination could not be completely purified and characterized due to minute levels of expression and its extremely low solubility as a fusion protein. No dehydratase activity was detected in crude extracts from transformed bacteria or transfected mammalian cells. Considering the decrease in specific activity and stability of the mutants, we conclude that the patient probably has less than 10% residual dehydratase activity, which could be responsible for the mild hyperphenylalaninemia and the high 7-biopterin levels.


Asunto(s)
Errores Innatos del Metabolismo de los Aminoácidos/enzimología , Hidroliasas/genética , Hidroliasas/metabolismo , Fenilalanina/metabolismo , Mutación Puntual , Errores Innatos del Metabolismo de los Aminoácidos/genética , Secuencia de Aminoácidos , Animales , Secuencia de Bases , Células CHO , Cromatografía en Gel , Clonación Molecular , Cricetinae , Cartilla de ADN , Electroforesis en Gel de Poliacrilamida , Estabilidad de Enzimas , Humanos , Hidroliasas/química , Cinética , Sustancias Macromoleculares , Datos de Secuencia Molecular , Mutagénesis Sitio-Dirigida , Reacción en Cadena de la Polimerasa , Proteínas Recombinantes/química , Proteínas Recombinantes/aislamiento & purificación , Proteínas Recombinantes/metabolismo , Termodinámica , Transfección
17.
Pathologe ; 21(6): 404-23, 2000 Nov.
Artículo en Alemán | MEDLINE | ID: mdl-11148821

RESUMEN

Therapy and prognosis of lung cancer depend crucially on tumor size, tumor stage, and the histomorphological tumor type at the time of primary diagnosis. A tumor weighing only 1 g and barely detectable by clinical examination consists of about 1 x 10(9) tumor cells. The primary histological diagnosis is generally based on small biopsies 1-2 mm in diameter, which allow the assessment of only a few up to some hundred tumor cells in a section of 4 microns. Until 20 years ago light microscopic and histochemical investigations were the basis for sophisticated morphological tumor diagnosis. In recent years electron microscopy, immunohistochemistry, cytometry, and molecular biology have extended our knowledge of the complex tumor biology, with the range of phenotypes and genotypes indicating enormous tumor heterogeneity. The value, expressiveness, and prognostic importance of these laborious and expensive techniques must be examined in studies, keeping in mind new aspects of tumor classification. Histological and cytological findings are still the decisive basis for the primary diagnosis of the pathologist in any given case.


Asunto(s)
Neoplasias Pulmonares/genética , Neoplasias Pulmonares/patología , Biopsia/métodos , Aberraciones Cromosómicas , Humanos , Neoplasias Pulmonares/terapia , Biología Molecular/métodos , Pronóstico
18.
Langenbecks Arch Surg ; 385(8): 521-5, 2000 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-11201008

RESUMEN

Solitary fibrous tumours (SFTs) are rare and usually benign neoplasms of mesenchymal origin that are often found in the visceral pleura (fibrous pleural tumour, FPT) or other serosal surfaces. They have also been found in soft tissues. We report the case of an SFT localised in the thigh of an 86-year-old woman. The tumour specimen was examined morphologically, immunohistochemically and molecular genetically, using comparative genomic hybridisation (CGH). The latter detects unbalanced chromosomal alterations in human neoplasms by competitive nucleic acid hybridisation and consecutive computer image analysis. The tumour consists of fibroblast-like cells, arranged in a typical "patternless pattern". Immunohistochemically, the tumour stained positively for vimentin, CD34, CD99, and focally for actin and desmin. No reaction occurred with keratin or S100 protein antibodies. CGH detected a single loss on chromosome 13q.


Asunto(s)
Aberraciones Cromosómicas/genética , Cromosomas Humanos Par 13/genética , Fibroma/diagnóstico , Músculo Esquelético/patología , Neoplasias de los Tejidos Blandos/diagnóstico , Anciano , Anciano de 80 o más Años , Diagnóstico Diferencial , Femenino , Fibroma/genética , Fibroma/patología , Fibroma/cirugía , Humanos , Inmunohistoquímica , Músculo Esquelético/cirugía , Hibridación de Ácido Nucleico , Neoplasias de los Tejidos Blandos/genética , Neoplasias de los Tejidos Blandos/patología , Neoplasias de los Tejidos Blandos/cirugía , Muslo , Resultado del Tratamiento
19.
Pathologe ; 25(3): 229-34, 2004 May.
Artículo en Alemán | MEDLINE | ID: mdl-15138705

RESUMEN

We report a rare case of a neuroendocrine carcinoma located in the esophagus of a 62-year-old male patient. The initial diagnosis of a "small-cell tumor" was based on biopsy. Our diagnosis was based on the histomorphological examination of the resected material. Diagnostic criteria were the characteristic solid or clustered growth patterns, monomorphic cell nuclei, lack of necrosis, immunohistochemical detection of neuroendocrine markers like chromogranin, synaptophysin and neuron-specific enolase (NSE) as well as detection of cytoplasmic neuroendocrine granules by electron microscopy. In addition, we found an increased prolific activity by staining with Ki67 antigen. 30% of the cell nuclei displayed a positive reaction. Focal invasion of blood vessels was also detected. With 17 different chromosomal imbalances, comparative genomic hybridization (CGH) revealed a malignant tumor stage that was not visible at the microscopic level. According to the new WHO classification of neuroendocrine tumors the described tumor was identified as an intermediate between a well-differentiated neuroendocrine carcinoma and a low-differentiated neuroendocrine carcinoma.


Asunto(s)
Carcinoma Neuroendocrino/patología , Neoplasias Esofágicas/patología , Biomarcadores/análisis , Biopsia , Carcinoma Neuroendocrino/genética , División Celular , Núcleo Celular/patología , Aberraciones Cromosómicas , Diagnóstico Diferencial , Neoplasias Esofágicas/genética , Humanos , Masculino , Persona de Mediana Edad , Necrosis , Fosfopiruvato Hidratasa/análisis , Sinaptofisina/análisis
20.
Biochem Biophys Res Commun ; 238(2): 556-9, 1997 Sep 18.
Artículo en Inglés | MEDLINE | ID: mdl-9299550

RESUMEN

4alpha-Carbinolamine dehydratase is a bifunctional protein involved in the regeneration of tetrahydrobiopterin during the hydroxylation of the aromatic amino acids. It is also a dimerization cofactor of HNF1 and therefore is believed to function as part of the hepatic gene transcription system. In view of the recent discoveries that the distribution and developmental pattern of the dehydratase do not correlate strictly with those of the aromatic amino acid hydroxylases and HNF1, the hypothesis that the dehydratase may have other unknown functions has been put forward. In the present paper, we demonstrate unambiguously that human epidermal keratinocytes express detectable levels of this protein as indicated by enzyme assay, immunoprecipitation, Western blot, and RT-PCR. Its complete coding sequence has been cloned and was found to be identical with the human liver counterpart. The possible function of the dehydratase in skin is discussed.


Asunto(s)
Hidroliasas/biosíntesis , Queratinocitos/enzimología , Piel/enzimología , Western Blotting , Células Cultivadas , Humanos , Reacción en Cadena de la Polimerasa , Pruebas de Precipitina , Piel/citología
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