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1.
Antonie Van Leeuwenhoek ; 117(1): 48, 2024 Mar 01.
Artículo en Inglés | MEDLINE | ID: mdl-38429402

RESUMEN

A gram-stain-positive, aerobic, rod-shaped bacterial strain capable of producing siderophores, named YIM B08730T, was isolated from a soil sample collected from Wumeng Mountain National Nature Reserve, Zhaotong City, Yunnan Province. Growth occurred at 10-45 °C (optimum, 35-40 â„ƒ), pH 7.0-9.0 (optimum, 7.0) and in the presence of 0-5 % (w/v) NaCl (optimum, 0-1 %, w/v). A comparative analysis of the 16S rRNA gene sequence (1558 bp) of strain YIM B08730T showed the highest similarity to Solibacillus isronensis JCM 13838T (96.2 %), followed by Solibacillus silvestris DSM 12223T (96.0 %) and Solibacillus kalamii ISSFR-015T (95.4 %). The main polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, phosphatidylserine and one unidentified lipid. The main respiratory quinone of strain YIM B08730T was menaquinone 7 (MK-7). The major fatty acids were iso-C15:0 and C16:1ω7c alcohol. The digital DNA-DNA hybridization and average nucleotide identity values between strain YIM B08730T and the reference strain S. isronensis JCM 13838T were 24.8 % and 81.2 %, respectively. The G + C content of the genomic DNA was 37.1 mol%. The genome of the novel strain contained genes associated with the production of siderophores, and it also revealed other functional gene clusters involved in plant growth promotion and soil bioremediation. Based on these phenotypic, chemotaxonomic and phylogenetic analyses, strain YIM B08730T is considered to be a novel species of the genus Solibacillus, for which the name Solibacillus ferritrahens sp. nov. is proposed. The type strain is YIM B08730T (= NBRC 116268T = CGMCC 1.60169T).


Asunto(s)
Bacterias , Fosfolípidos , Fosfolípidos/análisis , Filogenia , ARN Ribosómico 16S/genética , ADN Bacteriano/genética , China , Bacterias/genética , Suelo
2.
Antonie Van Leeuwenhoek ; 116(6): 557-564, 2023 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-37097385

RESUMEN

A new Gram-negative, rod-shaped, flagellated bacterium was isolated from soil in the Guishan, Xinping County, Yuxi City, Yunnan Province, China, and named YIM B01952T. Growth occurred at 10-40 °C (optimum, 30 °C), pH 6.0-9.0 (optimum, pH 7.5) and with up to ≤ 5.0% (w/v) NaCl on Tryptic Soy Broth Agar (TSA) plates. Phylogenetic analysis based on the 16S rRNA gene and draft-genome sequence showed that strain YIM B01952T belonged to the genus Pseudomonas, and was closely related to the type strain of Pseudomonas alcaligenes (sequence similarity was 98.8%). The digital DNA-DNA hybridization (dDDH) value between strain YIM B01952T and the parallel strain P. alcaligenes ATCC 14909T was 49.0% based on the draft genome sequence. The predominant menaquinone was Q-9. The major fatty acids were summed feature 8 (C18:1 ω6c and/or C18:1 ω7c), summed feature 3 (C16:1 ω6c and/or C16:1 ω7c) and C16:0. The major polar lipids were phosphatidylethanolamine, diphosphatidylglycerol, and phosphatidylglycerol. The genome size of strain YIM B01952T was 4.341 Mb, comprising 4156 predicted genes with a DNA G + C content of 66.4 mol%. In addition, we detected that strain YIM B01952T had some traditional functional genes (plant growth promotion and multidrug resistance), unique genes through genome comparison and analysis with similar strains. Based on genetic analyses and biochemical characterization, the strain YIM B01952T was identified as a novel species in the genus Pseudomonas, for which the name Pseudomonas subflava sp. nov. is proposed. The type strain is YIM B01952T (=CCTCC AB 2021498T = KCTC 92073T).


Asunto(s)
Ácidos Grasos , Pseudomonas , China , Filogenia , ARN Ribosómico 16S/genética , Pseudomonas/genética , ADN Bacteriano/genética , ADN Bacteriano/química , Ácidos Grasos/análisis , Análisis de Secuencia de ADN , Técnicas de Tipificación Bacteriana , Fosfolípidos/análisis
3.
Curr Microbiol ; 80(7): 225, 2023 May 25.
Artículo en Inglés | MEDLINE | ID: mdl-37227525

RESUMEN

In this study, a novel aerobic mesophilic bacterial strain with capable of degrading chitin, designated YIM B06366T, was isolated and classified. The rod-shaped, Gram-stain-negative, on-spore-forming bacterium originated from rhizosphere soil sample collected in Kunming City, Yunnan Province, southwest PR China. Strain YIM B06366T exhibited growth at temperatures between 20 and 35 °C (optimum, 30 °C) and at pH 6.0-8.0 (optimum, pH 6.0). The analysis of 16S rRNA gene sequence similarity revealed that strain YIM B06366T was most closely related to type strain Chitinolyticbacter meiyuanensis SYBC-H1T (98.9%). Phylogenetic analysis based on genome data indicated that strain YIM B06366T should be assigned to the genus Chitinolyticbacter. The Average Nucleotide Identity (ANI) and digital DNA-DNA Hybridization (dDDH) values between strain YIM B06366T and the reference strain Chitinolyticbacter meiyuanensis SYBC-H1T were 84.4% and 27.7%, respectively. The major fatty acids included Summed Feature 3 (C16:1 ω6c/C16:1 ω7c), Summed Feature 8 (C18:1 ω6c/C18:1 ω7c), and C16:0. The polar lipids were diphosphatidylglycerol, phosphatidylethanolamine, aminophospholipids, and two unidentified phospholipids. The predominant menaquinone was Q-8, and the genomic DNA G + C content was 64.1%. Considering the polyphasic taxonomic evidence, strain YIM B06366T is proposed as a novel species within the genus Chitinolyticbacter, named Chitinolyticbacter albus sp. nov. (type strain YIM B06366T = KCTC 92434T = CCTCC AB 2022163T).


Asunto(s)
Quitina , Rizosfera , China , Filogenia , ARN Ribosómico 16S/genética , Madera/química , Fosfolípidos/química , Ácidos Grasos/química , ADN , Análisis de Secuencia de ADN , ADN Bacteriano/genética , Técnicas de Tipificación Bacteriana
4.
Arch Microbiol ; 204(8): 492, 2022 Jul 16.
Artículo en Inglés | MEDLINE | ID: mdl-35841443

RESUMEN

A Gram-stain-negative, aerobic, rod-shaped bacteria strain, named YIM B01951T, was isolated from a forest soil sample collected from Mopan Mountain National Forest Park, Xinping City, Yunnan Province, southwest PR China (101°58'06" N, 23°03'02" E). Growth occurred at 15-40 °C (optimum, 30 °C), pH 5.0-8.0 (optimum, pH 6.5) and with up to ≤ 3.0% (w/v) NaCl on Nutrient Agar plates. The results of 16S rRNA gene sequence similarity analysis showed that strain YIM B01951T was closely related to the type strain of Cohnella arctica M9-62T (96.5%) and Cohnella lupini RLAHU4BT (96.3%). YIM B01951T contains anteiso-C15:0 and iso-C16:0 as the major cellular fatty acids; the main polar lipids are diphosphatidylglycerol (DPG), phosphatidylglycerol (PG), phosphatidylethanolamine (PE), lysylphosphatidylglycerol (PGL) and five aminophospholipids (APL). The MK-7 is the major respiratory quinone and the DNA G + C content is 49.2 mol%. Based on these phenotypic, chemotaxonomic and phylogenetic analyses, strain YIM B01951T is considered to be a novel species of the genus Cohnella, and named Cohnella mopanensis sp. nov. The type strain is YIM B01951T (= NBRC 115331T = KCTC 43370T).


Asunto(s)
Fosfolípidos , Suelo , Técnicas de Tipificación Bacteriana , China , ADN Bacteriano/genética , Ácidos Grasos/análisis , Bosques , Fosfolípidos/análisis , Filogenia , ARN Ribosómico 16S/genética , Análisis de Secuencia de ADN
5.
Curr Microbiol ; 80(1): 32, 2022 Dec 08.
Artículo en Inglés | MEDLINE | ID: mdl-36480068

RESUMEN

A new aerobic bacterial strain, designated strain YIM B02290T, was isolated from the soil of Machangqing, Dali city, Yunnan Province, China. Cells were Gram-stain-positive, sporogenous, rod-shaped, and motile with peritrichous flagella. Strain YIM B02290T showed the highest 16S rRNA gene sequence similarity with Brevibacillus laterosporus (97.6%) and Brevibacillus halotolerans (97.6%). The ANI and dDDH values between strain YIM B02290T and the two reference strains Brevibacillus laterosporus LAM00312T and Brevibacillus halotolerans DSM 25T are 72.6% and 72.2%, 20.2% and 19.5% based on the draft genome sequence, respectively. The major cellular fatty acids contain anteiso-C15: 0 and iso-C15: 0. The diagnostic diamino acid of the cell-wall peptidoglycan was meso-diaminopimelic acid. The predominant menaquinone was identified as menaquinone-7. The main polar lipids of strain YIM B02290T were diphosphatidylglycerol, phosphatidylglycerol, phospholipid, phosphatidyl monomethylethanolamine. The genomic DNA G + C content was 40.6 mol%. All results showed that strain YIM B02290T represents a novel species of the genus Brevibacillus, for which the name Brevibacillus daliensis sp. nov. is proposed. The type strain is YIM B02290T (= CCTCC AB 2021094T = CGMCC 1.18802T = KCTC 43376T).


Asunto(s)
Suelo , ARN Ribosómico 16S/genética , China
6.
J Nanosci Nanotechnol ; 18(1): 668-675, 2018 01 01.
Artículo en Inglés | MEDLINE | ID: mdl-29768893

RESUMEN

In this work, novel porous cellulose nanofibrils (CNF)/poly(vinyl alcohol) (PVA) hydrogels were prepared using the hybrid solvent of dimethyl sulfoxide (DMSO)/water, followed by freezing/thawing process. Structure, swelling, mechanical and thermal properties of CNF/PVA were explored. The results revealed that porous hydrogels were formed by using the hybrid solvent of DMSO/water, and the pore sizes of hydrogels were controlled by the concentration of CNF. The porous structure of the composite hydrogels can strongly enhance the swelling properties as expected. Compared with pure PVA hydrogels, a 150% improvement in compressive strength were achieved by the hybrid solvent. And the increment of compressive strength depended on the concentration of the CNF. Moreover, the addition of CNF improved the thermal stability of the PVA hydrogels significantly. The low cost, nontoxic and high-performance nanoreinforced hydrogels may have a promising application in tissue engineering fields.

7.
J Nanosci Nanotechnol ; 18(6): 4014-4021, 2018 Jun 01.
Artículo en Inglés | MEDLINE | ID: mdl-29442738

RESUMEN

With the pace of development accelerating in printed electronics, the fabrication and application of conductive ink have been brought into sharp focus in recent years. The discovery of graphene also unfolded a vigorous research campaign. In this paper, we prepared graphene conductive ink and explored the feasibility of applying the ink to flexible paper-based circuit. Since experimental study concentrating upon ink formulation was insufficient, orthogonal test design was used in the optimization of preparation formula of conductive ink for the first time. The purpose of this study was to determine the effect of constituent dosage on conductivity of graphene conductive ink, so as to obtain the optimized formula and prepare graphene conductive ink with good conductivity. Characterization of optimized graphene conductive ink we fabricated showed good adhesion to substrate and good resistance to acid and water. The graphene concentration of the optimized ink reached 73.17 wt% solid content. Particle size distribution of graphene conductive ink was uniform, which was about 1940 nm. Static surface tension was 28.9 mN/m and equilibrium contact angle was 23°, demonstrating that conductive ink had good wettability. Scanning Electron Microscope (SEM) analysis was also investigated, moreover, the feasibility of lightening a light-emitting diode (LED) light was verified. The graphene conductive ink with optimized formula can be stored for almost eight months, which had potential applications in flexible paper-based circuit in the future.

8.
Zhongguo Zhong Yao Za Zhi ; 41(3): 421-426, 2016 Feb.
Artículo en Zh | MEDLINE | ID: mdl-28868857

RESUMEN

To establish a fast detection method during the purifying process of the extracts from Grardeniae using macroporous resin based on near infrared spectroscopy. First, the ethanol eluent was collected from the purification process of small size sample; and near infrared (NIR) spectrum was collected. Then the content of the geniposide was determined by HPLC method, and partial least squares (PLS) method was used to establish the quantitative model to predict the content of geniposide by NIR spectrum. This model was used to supervise the changes of geniposide concentrations in ethanol eluent during medium scale process. Experimental results showed that the NIR small scale model can accurately predict the concentrations of geniposide in the production process of medium scale. However, with the proceeding of batch processes, the prediction performance of the model was decreased, so model updating method was employed to maintain the model. After twice updates, the NIR quantitative model can accurately predict the concentrations of the geniposide during medium scale process. Therefore, through model updates, the established NIR quantitative model can be applied in different scales of macroporous resin purification processes, to improve the data utilization efficiency of small scale process and save the cost of rebuilding the quantitative model of medium scale.


Asunto(s)
Medicamentos Herbarios Chinos/análisis , Medicamentos Herbarios Chinos/aislamiento & purificación , Iridoides/análisis , Iridoides/aislamiento & purificación , Rubiaceae/química , Espectroscopía Infrarroja Corta/métodos , Cromatografía Líquida de Alta Presión , Porosidad , Resinas Sintéticas/química
9.
Guang Pu Xue Yu Guang Pu Fen Xi ; 34(10): 2657-61, 2014 Oct.
Artículo en Zh | MEDLINE | ID: mdl-25739203

RESUMEN

The near infrared (NIR) spectra of Liuyi San samples were collected during the mixing process and the quantitative models by PLS (partial least squares) method were generated for the quantification of the concentration of glycyrrhizin. The PLS quantitative model had good calibration and prediction performances (r(cal) 0.998 5, RMSEC = 0.044 mg · g(-1); r(val) = 0.947 4, RMSEP = 0.124 mg · g(-1)), indicating that NIR spectroscopy can be used as a rapid determination method of the concentration of glycyrrhizin in Liuyi San powder. After the validation tests were designed, the Liao-Lin-Iyer approach based on Monte Carlo simulation was used to estimate ß-content-γ-confidence tolerance intervals. Then the uncertainty was calculated, and the uncer- tainty profile was drawn. The NIR analytical method was considered valid when the concentration of glycyrrhizin is above 1.56 mg · g(-1) since the uncertainty fell within the acceptable limits (λ = ± 20%). The results showed that uncertainty assessment can be used in NIR quantitative models of glycyrrhizin for different concentrations and provided references for other traditional Chinese medicine to finish the uncertainty assessment using NIR quantitative analysis.


Asunto(s)
Ácido Glicirrínico/análisis , Medicina Tradicional China , Espectroscopía Infrarroja Corta , Calibración , Análisis de los Mínimos Cuadrados , Polvos , Incertidumbre
10.
J Econ Entomol ; 2024 May 17.
Artículo en Inglés | MEDLINE | ID: mdl-38757786

RESUMEN

The ladybug, Cryptolaemus montrouzieri (Mulsant) (Coleoptera: Cocccinellidae)(Mulsant)(Coleoptera: Cocccinellidae), is a highly efficient predator in controlling mealybug populations and is considered an effective agent for controlling the papaya mealybugs (Paracoccus marginatus) (Williams & Granara de Willink) (Hemiptera: Pseudococcidae). Various criteria have been proposed for evaluating predator effectiveness, with the consumption rate of prey by individual predators, specifically the functional response, emerging as a common and crucial metric. This study evaluated the functional responses of third- and fourth-instar larvae, as well as male and female adults (<48 h old) of C. montrouzieri to adult females of P. marginatus at 3 different temperatures (22 °C, 28 °C, and 35 °C) with 70% ±â€…5% RH and a 12L:12D h photoperiod. Prey densities were 2, 4, 8, 16, 32, 45, or 60 papaya mealybugs per predator for all tests. The response to prey density by third- and fourth-instar larvae or both sexes of adult C. montrouzieri was a type II at all temperatures. The highest attack rate and lowest handling time were estimated at 28 °C in males and 35 °C in females, respectively. The highest daily prey consumption rate occurred at 35 °C in both the immature and adult stages of C. montrouzieri. These findings support the potential of C. montrouzieri in controlling the papaya mealybug, especially in tropical and subtropical regions, given its search efficiency at high temperatures tested in this study. However, additional field investigations are needed to ascertain the control efficacy of C. montrouzieri for this mealybug in biocontrol programs.

11.
Int J Med Sci ; 10(13): 1837-45, 2013.
Artículo en Inglés | MEDLINE | ID: mdl-24324360

RESUMEN

BACKGROUND: In heart, the extracellular matrix (ECM), produced by cardiac fibroblasts, is a potent regulator of heart's function and growth, and provides a supportive scaffold for heart cells in vitro and in vivo. Cardiac fibroblasts are subjected to mechanical loading all the time in vivo. Therefore, the influences of mechanical loading on formation and bioactivity of cardiac fibroblasts ECM should be investigated. METHODS: Rat cardiac fibroblasts were cultured on silicone elastic membranes and stimulated with mechanical cyclic stretch. After removing the cells, the ECMs coated on the membranes were prepared, some ECMs were treated with heparinase II (GAG-lyase), then the collagen, glycosaminoglycan (GAG) and ECM proteins were assayed. Isolated neonatal rat ventricular cells were seeded on ECM-coated membranes, the viability and lactate dehydrogenase (LDH) activity of the cells after 1-7 days of culture was assayed. In addition, the ATPase activity and related protein level, glucose consumption ratio and lactic acid production ratio of the ventricular cells were analyzed by spectrophotometric methods and Western blot. RESULTS: The cyclic stretch increased collagen and GAG levels of the ECMs, and elevated protein levels of collagen I and fibronectin. Compared with the ECMs produced by unstretched cardiac fibroblasts, the ECMs of mechanically stretched fibroblasts improved viability and LDH activity, elevated the Na⁺/K⁺-ATPase activity, sarco(endo)plasmic reticulum Ca²âº-ATPase (SERCA) activity and SERCA 2a protein level, glucose consumption ratio and lactic acid production ratio of ventricular cells seeded on them. The treatment with heparinase II reduced GAG levels of these ECMs, and lowered these metabolism-related indices of ventricular cells cultured on the ECMs. CONCLUSIONS: Mechanical stretch promotes ECM formation of cardiac fibroblasts in vitro, the ECM of mechanically stretched cardiac fibroblasts improves metabolic activity of ventricular cells cultured in vitro, and the GAG of the ECMs is involved in regulating metabolic activity of ventricular cells.


Asunto(s)
Matriz Extracelular , Ventrículos Cardíacos/metabolismo , Miocitos Cardíacos/metabolismo , Estrés Mecánico , Adenosina Trifosfatasas/metabolismo , Animales , Células Cultivadas , Fibroblastos/citología , Fibroblastos/enzimología , Fibroblastos/metabolismo , Glucosa/metabolismo , Ventrículos Cardíacos/citología , Ventrículos Cardíacos/enzimología , Liasa de Heparina/metabolismo , L-Lactato Deshidrogenasa/metabolismo , Ácido Láctico/biosíntesis , Miocitos Cardíacos/citología , Miocitos Cardíacos/enzimología , Ratas
12.
Chin Med Sci J ; 28(4): 218-24, 2013 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-24382223

RESUMEN

OBJECTIVES: To construct the cancellous bone explant model and a method of culturing these bone tissues in vitro, and to investigate the effect of mechanical load on growth of cancellous bone tissue in vitro. METHODS: Cancellous bone were extracted from rabbit femoral head and cut into 1-mm-thick and 8-mm-diameter slices under sterile conditions. HE staining and scanning electron microscopy were employed to identify the histomorphology of the model after being cultured with a new dynamic load and circulating perfusion bioreactor system for 0, 3, 5, and 7 days, respectively. We built a three-dimensional model using microCT and analyzed the loading effects using finite element analysis. The model was subjected to mechanical load of 1000, 2000, 3000, and 4000 µÎµ respectively for 30 minutes per day. After 5 days of continuous stimuli, the activities of alkaline phosphatase (AKP) and tartrate-resistant acid phosphatase (TRAP) were detected. Apoptosis was analyzed by DNA ladder detection and caspase-3/8/9 activity detection. RESULTS: After being cultured for 3, 5, and 7 days, the bone explant model grew well. HE staining showed the apparent nucleus in cells at the each indicated time, and electron microscope revealed the living cells in the bone tissue. The activities of AKP and TRAP in the bone explant model under mechanical load of 3000 and 4000 µÎµ were significantly lower than those in the unstressed bone tissues (all P<0.05). DNA ladders were seen in the bone tissue under 3000 and 4000 µÎµ mechanical load. Moreover, there was significant enhancement in the activities of caspase-3/8/9 in the mechanical stress group of 3000 and 4000 µÎµ(all P<0.05). CONCLUSIONS: The cancellous bone explant model extracted from the rabbit femoral head could be alive at least for 7 days in the dynamic load and circulating perfusion bioreactor system, however, pathological mechanical load could affect the bone tissue growth by apoptosis in vitro. The differentiation of osteoblasts and osteoclasts might be inhibited after the model is stimulated by mechanical load of 3000 and 4000 µÎµ.


Asunto(s)
Desarrollo Óseo , Fosfatasa Ácida/metabolismo , Fosfatasa Alcalina/metabolismo , Animales , Apoptosis , Caspasas/metabolismo , Análisis de Elementos Finitos , Isoenzimas/metabolismo , Masculino , Conejos , Estrés Mecánico , Fosfatasa Ácida Tartratorresistente , Microtomografía por Rayos X
13.
Yao Xue Xue Bao ; 48(10): 1590-4, 2013 Oct.
Artículo en Zh | MEDLINE | ID: mdl-24417087

RESUMEN

The study is aimed to investigate the effect of lamivudine on growth and metabolism of three intestinal characteristic bacteria (namely, Bifidobacterium adolescentis, Escherichia coli and Shigella dysenteriae). The growth condition of the three bacteria was quantitatively evaluated by microcalorimetry with four characteristic parameters of the thermal power-time curves, including the growth rate constant (k), thermal power (p), time to peak (t) and calorific value (Q). The results showed that the IC50 value of lamivudine on B. adolescentis was 200 microg x mL(-1), and the IC50 values of lamivudine on S. dysenteriae and E. coli were higher than 3 000 microg x mL(-1) and 6 000 microg x mL(1), respectively. Therefore, lamivudine made different inhibitory effects on the three bacteria, in which the B. adolescentis was most susceptible to lamivudine. This work showed that taking lamivudine chronically is likely to affect the balance of good flora in the intestinal tract, and might increase endotoxin release, leading to inflammation and disease progression in hepatopathy.


Asunto(s)
Antibacterianos/farmacología , Bifidobacterium/crecimiento & desarrollo , Escherichia coli/crecimiento & desarrollo , Lamivudine/farmacología , Shigella dysenteriae/crecimiento & desarrollo , Calorimetría
14.
IEEE Trans Neural Netw Learn Syst ; 34(5): 2338-2352, 2023 May.
Artículo en Inglés | MEDLINE | ID: mdl-34543206

RESUMEN

The performance of a convolutional neural network (CNN) heavily depends on its hyperparameters. However, finding a suitable hyperparameters configuration is difficult, challenging, and computationally expensive due to three issues, which are 1) the mixed-variable problem of different types of hyperparameters; 2) the large-scale search space of finding optimal hyperparameters; and 3) the expensive computational cost for evaluating candidate hyperparameters configuration. Therefore, this article focuses on these three issues and proposes a novel estimation of distribution algorithm (EDA) for efficient hyperparameters optimization, with three major contributions in the algorithm design. First, a hybrid-model EDA is proposed to efficiently deal with the mixed-variable difficulty. The proposed algorithm uses a mixed-variable encoding scheme to encode the mixed-variable hyperparameters and adopts an adaptive hybrid-model learning (AHL) strategy to efficiently optimize the mixed-variables. Second, an orthogonal initialization (OI) strategy is proposed to efficiently deal with the challenge of large-scale search space. Third, a surrogate-assisted multi-level evaluation (SME) method is proposed to reduce the expensive computational cost. Based on the above, the proposed algorithm is named s urrogate-assisted hybrid-model EDA (SHEDA). For experimental studies, the proposed SHEDA is verified on widely used classification benchmark problems, and is compared with various state-of-the-art methods. Moreover, a case study on aortic dissection (AD) diagnosis is carried out to evaluate its performance. Experimental results show that the proposed SHEDA is very effective and efficient for hyperparameters optimization, which can find a satisfactory hyperparameters configuration for the CIFAR10, CIFAR100, and AD diagnosis with only 0.58, 0.97, and 1.18 GPU days, respectively.

15.
IEEE Trans Cybern ; 53(6): 3624-3638, 2023 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-35333730

RESUMEN

Cooperative coevolution (CC) algorithms based on variable decomposition methods are efficient in solving large-scale optimization problems (LSOPs). However, many decomposition methods, such as the differential grouping (DG) method and its variants, are based on the theorem of function additively separable, which may not work well on problems that are not additively separable and will result in a bottleneck for CC to solve various LSOPs. This deficiency motivates us to study how the decomposition method can decompose more kinds of separable functions, such as the multiplicatively separable function, to improve the general problem-solving ability of CC on LSOPs. With this concern, this article makes the first attempt to decompose multiplicatively separable functions and proposes a novel method called dual DG (DDG) for better LSOP decomposition and optimization. The novelty and advantage of DDG are that it can be suitable for not only additively separable functions but also multiplicatively separable functions, which can considerably expand the application scope of CC. In this article, we will first define the multiplicatively separable function, and then mathematically show its relationship to the additively separable function and how they can be transformed into each other. Based on this, the DDG can use two kinds of differences to detect the separable structure of both additively and multiplicatively separable functions. In addition, the time complexity of DDG is analyzed and a DDG-based CC algorithm framework is developed for solving LSOPs. To verify the superiority of DDG, experiments and comparisons with some state-of-the-art and champion algorithms are conducted not only on 30 LSOPs based on the test suite of the IEEE CEC large-scale global optimization competition, but also on a case study of the parameter optimization for a neural network-based application.

16.
IEEE Trans Cybern ; 53(5): 2791-2804, 2023 May.
Artículo en Inglés | MEDLINE | ID: mdl-35286273

RESUMEN

Distributed differential evolution (DDE) is an efficient paradigm that adopts multiple populations for cooperatively solving complex optimization problems. However, how to allocate fitness evaluation (FE) budget resources among the distributed multiple populations can greatly influence the optimization ability of DDE. Therefore, this article proposes a novel three-layer DDE framework with adaptive resource allocation (DDE-ARA), including the algorithm layer for evolving various differential evolution (DE) populations, the dispatch layer for dispatching the individuals in the DE populations to different distributed machines, and the machine layer for accommodating distributed computers. In the DDE-ARA framework, three novel methods are further proposed. First, a general performance indicator (GPI) method is proposed to measure the performance of different DEs. Second, based on the GPI, a FE allocation (FEA) method is proposed to adaptively allocate the FE budget resources from poorly performing DEs to well-performing DEs for better search efficiency. This way, the GPI and FEA methods achieve the ARA in the algorithm layer. Third, a load balance strategy is proposed in the dispatch layer to balance the FE burden of different computers in the machine layer for improving load balance and algorithm speedup. Moreover, theoretical analyses are provided to show why the proposed DDE-ARA framework can be effective and to discuss the lower bound of its optimization error. Extensive experiments are conducted on all the 30 functions of CEC 2014 competitions at 10, 30, 50, and 100 dimensions, and some state-of-the-art DDE algorithms are adopted for comparisons. The results show the great effectiveness and efficiency of the proposed framework and the three novel methods.

17.
J Econ Entomol ; 116(1): 119-126, 2023 02 10.
Artículo en Inglés | MEDLINE | ID: mdl-36440699

RESUMEN

Agasicles hygrophila Selman and Vogt (Coleoptera: Chrysomelidae) is a natural enemy of Alternanthera philoxeroides (Mart.) Griseb (Amaranthaceae: Alternanthera), a worldwide invasive weed. Elevated atmospheric CO2 concentrations may have significant impacts plants, herbivorous insects, and natural enemies. To assess the concurrent effect of elevated CO2 on the development time, fecundity, and population parameters of A. hygrophila, the age-stage, two-sex life table was used to understand the fitness and population parameters of individually-reared and group-reared A. hygrophila under elevated CO2 concentration. In individually-reared population, the development time of preadults, adult pre-oviposition period, and total pre-oviposition period of A. hygrophila in the elevated CO2 (eCO2, 750 ppm) treatment were shorter than those in the ambient CO2 (aCO2, 420 ppm) treatment. In group-reared population, the developmental time of preadults, female adult longevity, female proportion, adult pre-oviposition period, and total pre-oviposition period of A. hygrophila in eCO2 were longer than those in aCO2. Additionally, in both individually-reared and group-reared population, fecundity and oviposition days of A. hygrophila in eCO2 were higher than those in aCO2, and a higher intrinsic rate of increase, finite rate of increase, and the net reproductive rate of A. hygrophila were observed at eCO2. Moreover, shorter preadult development time, adult pre-oviposition period, total pre-oviposition period, male adult longevity, and higher fecundity were found in group-reared cohort at both aCO2 and eCO2. The results indicates that elevated CO2 has effects on the growth and reproduction of A. hygrophila, and the population growth rate of group-reared was faster and produced more offspring.


Asunto(s)
Acanthaceae , Amaranthaceae , Escarabajos , Femenino , Animales , Dióxido de Carbono , Crecimiento Demográfico
18.
Life (Basel) ; 12(8)2022 Aug 17.
Artículo en Inglés | MEDLINE | ID: mdl-36013435

RESUMEN

Plants release a variety of volatiles and herbivore-induced plant volatiles (HIPVs) after being damaged by herbivorous insects, which play multiple roles in the interactions with other plants and insects. Agasicles hygrophila Selman and Vogt (Coleoptera: Chrysomelidae) is a monophagous natural enemy and an effective biocontrol agent for Alternanthera philoxeroides (Mart.) Griseb. Here, we reported differences among the volatiles of A. philoxeroides by solid phase microextraction (SPME) using a gas chromatography-mass spectrometer (GC-MS). We compared the volatile emission of: (1) clean plants (CK); (2) A. philoxeroides plants with mechanical damage treatment (MD); and (3) A. philoxeroides plants infested with A. hygrophila 1st, 2nd, and 3rd larvae and female and male adults. A total of 97 volatiles were recorded, of which 5 occurred consistently in all treatments, while 61 volatiles were only observed in A. philoxeroides infested by A. hygrophila, such as trans-nerolidol, (E)-ß-farnesene, and (3E,7E)-4,8,12-trimethyltrideca-1,3,7,11-tetraene (E, E-TMTT), etc. Among the 97 volatile compounds, 37 compounds belong to alkenes, 29 compounds belong to alkanes, and there were 8 esters, 8 alcohols and 6 ketones. Orthogonal partial least squares-discrimination analysis (OPLS-DA) showed that the different treatments were separated from each other, especially insect feeding from CK and MD treatments, and 19 volatiles contributed most to the separation among the treatments, with variable importance for the projection (VIP) values > 1. Our findings indicated that the alligatorweed plants could be induced to release volatiles by different stages of A. hygrophila, and the volatile compounds released differ quantitatively and qualitatively. The results from this study laid an important foundation for using volatile organic compounds (VOCs) and HIPVs of alligatorweed to improve the control effect of A. hygrophila on A. philoxeroides.

19.
Insects ; 13(9)2022 Sep 02.
Artículo en Inglés | MEDLINE | ID: mdl-36135505

RESUMEN

The papaya mealybug, Paracoccus marginatus Williams and Granara de Willink (Hemiptera: Pseudococcidae), is a polyphagous invasive pest in China. The effect that the shifting of the host plant has on the fitness of a polyphagous pest is critical to its prevalence and potential pest control. In order to assess the fitness changes of P. marginatus after transferal from potato (Solanum tuberosum (Tubiflorae: Solanaceae)) to papaya (Carica papaya (Parietales: Caricacea)), sweet potato (Ipomoea batatas (Tubiflorae: Convolvulaceae)), and alligator weed (Alternanthera philoxeroides (Centrospermae: Amaranthaceae)), the life table data of three consecutive generations were collected and analyzed using the age-stage, two-sex life table method. The results showed that when P. marginatus was transferred from S. tuberosum to papaya, a higher intrinsic rate of increase (r) and finite rate of increase (λ) were observed. Paracoccus marginatus individuals transferred to I. batatas had the significantly lower population parameters than those on C. papaya; however, the fitness recovered for those on I. batatas after two generations. Paracoccus marginatus individuals were unable to complete development on A. philoxeroides. Our results conclusively demonstrate that P. marginatus individuals can readily adapt to C. papaya and I. batatas even after host plant shifting, and are capable of causing severe damage to these hosts.

20.
Insects ; 13(10)2022 Sep 26.
Artículo en Inglés | MEDLINE | ID: mdl-36292822

RESUMEN

Papaya mealybug, Paracoccus marginatus Williams and Granara de Willink (Hemiptera: Pseudococcidae), is an economically important, invasive insect that is now distributed worldwide. Chlorfenapyr has been demonstrated to have a significant control effect on P. marginatus. In order to evaluate the sublethal and transgenerational effects of chlorfenapyr on P. marginatus, the life table data of three consecutive generations were collected and analyzed by the age stage, two-sex life table method, and the enzyme activities were assayed using a spectrophotometer. The results showed that exposure to the insecticide had significant effects on the biological traits of subsequent generations of P. marginatus, and a higher intrinsic rate of increase (r), finite rate of increase (λ), net reproductive rate (R0), and a shorter mean generation time (T) were observed in the chlorfenapyr-treated F1 mealybugs. Enzyme activity assays showed that chlorfenapyr significantly inhibited the activities of catalase (CAT) and peroxidase (POD) while activating the activities of superoxide dismutase (SOD), which suggested that SOD, CAT, and POD may play an important role in the self-defense of P. marginatus against chlorfenapyr. These results conclusively demonstrated that exposure of P. marginatus to sublethal concentrations of chlorfenapyr induced hormetic effects on the F1 generation while having negative effects on the F0 and F3 generations.

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