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1.
Mol Breed ; 41(2): 8, 2021 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-37309476

RESUMEN

Maize is one of the most important crops, but its production is threatened by drought stress worldwide. Thus, increased drought tolerance has been a major goal of maize breeding. Conventional breeding strategies have led to significantly increase of maize yields; however, these strategies often fail to meet the need for drought stress tolerance enhancement. Here, we focus on progress related to the genetic dissection of drought tolerance in maize at different developmental stages achieved through linkage mapping and association mapping. Moreover, recent molecular breeding systems, including transgenic, genome-wide marker-assisted selection, and genome editing technologies, have provided a more direct, efficient, and accurate approach for trait improvement. We also provide perspectives on future directions regarding multi-omics studies and maize improvement. Overall, the application of acquired knowledge will facilitate maize breeding to meet the challenges.

2.
Mol Cell Proteomics ; 18(2): 263-276, 2019 02.
Artículo en Inglés | MEDLINE | ID: mdl-30409858

RESUMEN

The success of modern maize breeding has been demonstrated by remarkable increases in productivity with tremendous modification of agricultural phenotypes over the last century. Although the underlying genetic changes of the maize adaptation from tropical to temperate regions have been extensively studied, our knowledge is limited regarding the accordance of protein and mRNA expression levels accompanying such adaptation. Here we conducted an integrative analysis of proteomic and transcriptomic changes in a maize association panel. The minimum extent of correlation between protein and RNA levels suggests that variation in mRNA expression is often not indicative of protein expression at a population scale. This is corroborated by the observation that mRNA- and protein-based coexpression networks are relatively independent of each other, and many pQTLs arise without the presence of corresponding eQTLs. Importantly, compared with transcriptome, the subtypes categorized by the proteome show a markedly high accuracy to resemble the genomic subpopulation. These findings suggest that proteome evolved under a greater evolutionary constraint than transcriptome during maize adaptation from tropical to temperate regions. Overall, the integrated multi-omics analysis provides a functional context to interpret gene expression variation during modern maize breeding.


Asunto(s)
Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Proteómica/métodos , Zea mays/crecimiento & desarrollo , Evolución Molecular , Perfilación de la Expresión Génica/métodos , Regulación del Desarrollo de la Expresión Génica , Regulación de la Expresión Génica de las Plantas , Fitomejoramiento , Mapas de Interacción de Proteínas , Sitios de Carácter Cuantitativo , Zea mays/genética , Zea mays/metabolismo
3.
Plant Biotechnol J ; 18(5): 1271-1283, 2020 05.
Artículo en Inglés | MEDLINE | ID: mdl-31692165

RESUMEN

Drought is a major abiotic stress that threatens maize production globally. A previous genome-wide association study identified a significant association between the natural variation of ZmTIP1 and the drought tolerance of maize seedlings. Here, we report on comprehensive genetic and functional analysis, indicating that ZmTIP1, which encodes a functional S-acyltransferase, plays a positive role in regulating the length of root hairs and the level of drought tolerance in maize. We show that enhancing ZmTIP1 expression in transgenic Arabidopsis and maize increased root hair length, as well as plant tolerance to water deficit. In contrast, ZmTIP1 transposon-insertional mutants displayed the opposite phenotype. A calcium-dependent protein kinase, ZmCPK9, was identified as a substrate protein of ZmTIP1, and ZmTIP1-mediated palmitoylation of two cysteine residues facilitated the ZmCPK9 PM association. The results of this research enrich our knowledge about ZmTIP1-mediated protein S-acylation modifications in relation to the regulation of root hair elongation and drought tolerance. Additionally, the identification of a favourable allele of ZmTIP1 also provides a valuable genetic resource or selection target for the genetic improvement of maize.


Asunto(s)
Sequías , Zea mays , Variación Genética , Estudio de Asociación del Genoma Completo , Plantones/genética , Estrés Fisiológico , Zea mays/genética
4.
PLoS Genet ; 9(9): e1003790, 2013.
Artículo en Inglés | MEDLINE | ID: mdl-24086146

RESUMEN

The worldwide production of maize (Zea mays L.) is frequently impacted by water scarcity and as a result, increased drought tolerance is a priority target in maize breeding programs. While DREB transcription factors have been demonstrated to play a central role in desiccation tolerance, whether or not natural sequence variations in these genes are associated with the phenotypic variability of this trait is largely unknown. In the present study, eighteen ZmDREB genes present in the maize B73 genome were cloned and systematically analyzed to determine their phylogenetic relationship, synteny with rice, maize and sorghum genomes; pattern of drought-responsive gene expression, and protein transactivation activity. Importantly, the association between the nucleic acid variation of each ZmDREB gene with drought tolerance was evaluated using a diverse population of maize consisting of 368 varieties from tropical and temperate regions. A significant association between the genetic variation of ZmDREB2.7 and drought tolerance at seedling stage was identified. Further analysis found that the DNA polymorphisms in the promoter region of ZmDREB2.7, but not the protein coding region itself, was associated with different levels of drought tolerance among maize varieties, likely due to distinct patterns of gene expression in response to drought stress. In vitro, protein-DNA binding assay demonstrated that ZmDREB2.7 protein could specifically interact with the target DNA sequences. The transgenic Arabidopsis overexpressing ZmDREB2.7 displayed enhanced tolerance to drought stress. Moreover, a favorable allele of ZmDREB2.7, identified in the drought-tolerant maize varieties, was effective in imparting plant tolerance to drought stress. Based upon these findings, we conclude that natural variation in the promoter of ZmDREB2.7 contributes to maize drought tolerance, and that the gene and its favorable allele may be an important genetic resource for the genetic improvement of drought tolerance in maize.


Asunto(s)
Sequías , Plantones/genética , Sintenía/genética , Factores de Transcripción/genética , Zea mays/genética , Secuencia de Aminoácidos , Arabidopsis/genética , Regulación de la Expresión Génica de las Plantas , Estudios de Asociación Genética , Oryza/genética , Filogenia , Regiones Promotoras Genéticas , Plantones/crecimiento & desarrollo , Zea mays/crecimiento & desarrollo
5.
Sichuan Da Xue Xue Bao Yi Xue Ban ; 47(6): 869-873, 2016 Nov.
Artículo en Zh | MEDLINE | ID: mdl-28598115

RESUMEN

OBJECTIVES: To investigate the expression of miR-429 and its target gene heat shock protein A4L (HSPA4L) in sperms from asthenospermia patients. METHODS: Twenty semen samples from healthy and fertile adults and 20 semen samples from asthenospermia patients were collected,and normal sperm parameters were defined according to World Health Organization criteria.The expression levels of miR-429 and HSPA4L mRNA were determined by qRT-PCR,and the bioinformatics tool (Targetscan) was used to predict the target of miR-429.Luciferase reporter assay and transfection study were performed to confirm target gene of miR-429.The expression levels of HSPA4L mRNA and protein were further determined by qRT-CPR and Western blot,respectively. RESULTS: The motility and viability of sperms from asthenospermia patients were lower than that in control group,and miR-429 was up-regulated in sperms from asthenospermia patients.Bioinformatics analysis revealed that HSPA4L was a target of miR-429.Luciferase reporter assay and transfection study further confirmed that miR-429 suppresses the expressions of HSPA4L mRNA and protein via directly targeting HSPA4L 3'UTR.Results from clinical samples also demonstrated that HSPA4L mRNA and protein were down-regulated in sperms from asthenospermia patients and the expression level of miR-429 was inversely correlated with the expression level of HSPA4L mRNA (r=-0.725, P<0.05). CONCLUSIONS: miR-429 is up-regulated in sperms from asthenospermia patients,and it may modulate the motility and viability of sperms via suppressing the expression of HSPA4L.


Asunto(s)
Astenozoospermia/metabolismo , Proteínas HSP70 de Choque Térmico/metabolismo , MicroARNs/metabolismo , Espermatozoides/metabolismo , Adulto , Estudios de Casos y Controles , Línea Celular Tumoral , Humanos , Masculino , ARN Mensajero/metabolismo , Motilidad Espermática , Transfección , Regulación hacia Arriba
6.
Arch Virol ; 160(2): 577-80, 2015 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-25248625

RESUMEN

The complete nucleotide sequence of Alternaria longipes dsRNA virus 1 (AlRV1), a novel double-stranded RNA (dsRNA) mycovirus, was determined and analyzed. AlRV1-HN28 contains a single dsRNA genome segment 3415 base pairs in length (excluding the 3' poly(A) tail) and was predicted to contain two discontiguous open reading frames (ORFs, ORF A and ORF B). The 5'-proximal ORF A (1182 nt) potentially encodes a protein of 394 amino acids (aa) with a predicted molecular mass of 43 kDa; this protein showed no significant similarities to any other sequences in any of the NCBI protein databases. The 3'-proximal ORF B (1737 nt) encodes a protein of 579 aa with a predicted molecular mass of 65 kDa; this protein sequence shares similarities with the conserved domains of RNA-dependent RNA polymerases of other mycoviruses. Phylogenetic analysis indicated that AlRV1-HN28 was closely related to four other unclassified viruses, which suggests that the AlRV1-HN28 isolated from Alternaria longipes may belong to a new family of dsRNA mycoviruses. This is the first report of the full-length nucleotide sequence of a mycovirus that infects Alternaria longipes.


Asunto(s)
Alternaria/virología , Genoma Viral/genética , Virus ARN/genética , Virus no Clasificados/genética , Regiones no Traducidas 3'/genética , Regiones no Traducidas 5'/genética , Secuencia de Aminoácidos , Secuencia de Bases , Sistemas de Lectura Abierta/genética , Filogenia , ARN Bicatenario , ARN Viral/genética , ARN Polimerasa Dependiente del ARN/genética , Análisis de Secuencia de ARN , Proteínas Virales/genética , Virus no Clasificados/aislamiento & purificación
7.
Sci Rep ; 14(1): 8465, 2024 04 11.
Artículo en Inglés | MEDLINE | ID: mdl-38605082

RESUMEN

The relationship between oxygen sensing and autophagy in human sperms was explored in this study. Health semen and asthenozoospermia (astheno) semen were incubated with hypoxia-inducible factor-1α (HIF-1α) interferents, i.e., lificiguat (YC-1) or cobalt chloride (CoCl2), respectively. Label-free quantitative proteomic technology was used to identify the differentially expressed proteins in human semen under the hypoxia condition. Selected proteins were detected with ELISA. It was found that the autophagy levels of sperm in the YC-1 + health group or CoCl2 + astheno group increased while the vitality decreased. A total of 17, 34 and 35 differentially expressed proteins were observed in the Astheno group, the YC-1 + health group and the CoCl2 + astheno group, respectively. These proteins were primarily associated with protein processing in endoplasmic reticulum, Th17 cell differentiation, progesterone-mediated oocyte maturation, glycolysis/gluconeogenesis, HIF-1 signaling pathway, biosynthesis of amino acids, and carbon metabolism. The expression levels of protein HIF-1α, LC3B, histone H4, cathepsin L and ENO1 changed significantly in the groups. The study suggests that hypoxia can increase sperm autophagy level and reduce their vitality through HIF-1 signaling pathway and glycolysis/gluconeogenesis signaling pathway. Furthermore, proteins histone H4, cathepsin L, glutathione synthetase and ENO1 are proposed as potential biomarkers of autophagy and vitality in asthenozoospermia sperm.


Asunto(s)
Astenozoospermia , Histonas , Humanos , Masculino , Catepsina L , Hipoxia de la Célula , Proteómica , Semen , Hipoxia , Cobalto , Autofagia , Espermatozoides , Subunidad alfa del Factor 1 Inducible por Hipoxia
8.
J Agric Food Chem ; 71(25): 9599-9608, 2023 Jun 28.
Artículo en Inglés | MEDLINE | ID: mdl-37318564

RESUMEN

The utilization of agrochemicals has been of significant importance in both the cultivation and disease control of crops. The development of advanced agrochemicals that are both effective and eco-friendly has been made possible through the use of slow delivery platforms and surface modification technology. Inspired by the nature of mussel adhesion, polyphenolic platforms with versatile properties have been extensively employed in various applications, including agro-food, owing to their ability to flexibly modulate chemical and surface characteristics. This mini-review highlights the development of polyphenols, such as polydopamine and tannic acid, in the field of agrochemicals, particularly in the design and production of novel fertilizers and pesticides. The synthetic approach, active ingredient release performance, foliar adhesion, and design of polyphenolic-based agrochemicals in recent years have been discussed to explore their potential applications and limitations. We believe that utilizing versatile polyphenolic materials and their characteristics for agro-food applications can provide innovative ideas and suggestions for developing novel agrochemicals suitable for modern and sustainable horticulture and agriculture.


Asunto(s)
Plaguicidas , Fertilizantes , Polifenoles , Nanotecnología , Agroquímicos , Agricultura
9.
J Agric Food Chem ; 71(6): 2773-2783, 2023 Feb 15.
Artículo en Inglés | MEDLINE | ID: mdl-36703540

RESUMEN

Bacterial fruit blotch is one of the most destructing diseases of melon producing-regions. Here, zinc oxide quantum dots (ZnO QDs) were synthesized, and their antibacterial activity against Acidovorax citrulli was investigated. The results indicated that the obtained ZnO QDs displayed 5.7-fold higher antibacterial activity than a commercial Zn-based bactericide (zinc thiazole). Interestingly, the antibacterial activity of ZnO QDs irradiated with light was 1.8 times higher than that of the dark-treated group. It was because ZnO QDs could induce the generation of hydroxyl radicals and then up-regulate the expression of oxidative stress-related genes, finally leading to the loss of cell membrane integrity. A pot experiment demonstrated that foliar application of ZnO QDs significantly reduced the bacterial fruit blotch disease incidence (32.0%). Furthermore, the supply of ZnO QDs could improve the growth of infected melon seedlings by activating the antioxidant defense system. This work provides a promising light-activated quantum-bactericide for the management of pathogenic bacterial infections in melon crop protection.


Asunto(s)
Infecciones Bacterianas , Cucurbitaceae , Puntos Cuánticos , Óxido de Zinc , Óxido de Zinc/farmacología , Plantones , Frutas/microbiología , Antibacterianos/farmacología
10.
Nat Genet ; 55(3): 496-506, 2023 03.
Artículo en Inglés | MEDLINE | ID: mdl-36806841

RESUMEN

In the context of climate change, drought is one of the most limiting factors that influence crop production. Maize, as a major crop, is highly vulnerable to water deficit, which causes significant yield loss. Thus, identification and utilization of drought-resistant germplasm are crucial for the genetic improvement of the trait. Here we report on a high-quality genome assembly of a prominent drought-resistant genotype, CIMBL55. Genomic and genetic variation analyses revealed that 65 favorable alleles of 108 previously identified drought-resistant candidate genes were found in CIMBL55, which may constitute the genetic basis for its excellent drought resistance. Notably, ZmRtn16, encoding a reticulon-like protein, was found to contribute to drought resistance by facilitating the vacuole H+-ATPase activity, which highlights the role of vacuole proton pumps in maize drought resistance. The assembled CIMBL55 genome provided a basis for genetic dissection and improvement of plant drought resistance, in support of global food security.


Asunto(s)
Sequías , Zea mays , Zea mays/genética , Genotipo , Fenotipo , Genómica
11.
Methods Mol Biol ; 2462: 201-219, 2022.
Artículo en Inglés | MEDLINE | ID: mdl-35152391

RESUMEN

Drought stress is a serious agronomic problem resulting in significant yield losses globally. Breeding cultivars with drought tolerance is an important strategy that can be used to address this problem. Drought tolerance, however, is a complex multigenic trait, making advancements with conventional breeding approaches very challenging. This emphasizes the importance of dissecting the genetics of this trait and the identification and cloning of genes responsible for drought tolerance. With the rapid development of sequencing technologies and analytic methodologies, genome-wide association study (GWAS) has become an important tool for detecting natural variations underlying complex traits in crops. Identified loci can serve as targets for genomic selection or precise editing that enables the molecular design of new cultivars. This chapter describes the pipeline of statistical methods used in GWAS analysis, and covers field design, quality control, population structure control, association tests, and visualization of data. GWAS methodology used to dissect the genetic basis of drought tolerance is presented, and perspectives for optimizing the design and analysis of GWAS are discussed. The provided information serves as a valuable resource for researchers interested in GWAS technology.


Asunto(s)
Sequías , Estudio de Asociación del Genoma Completo , Fenotipo , Fitomejoramiento , Polimorfismo de Nucleótido Simple , Sitios de Carácter Cuantitativo
12.
Genes (Basel) ; 14(1)2022 12 20.
Artículo en Inglés | MEDLINE | ID: mdl-36672748

RESUMEN

Drought is a primary environmental factor limiting maize production globally. Although transferring a single gene to maize can enhance drought resistance, maize response to water deficit requires further improvement to accommodate the steadily intensifying drought events worldwide. Here, we generated dual transgene lines simultaneously overexpressing two drought-resistant genes, ZmVPP1 (encoding a vacuolar-type H+ pyrophosphatase) and ZmNAC111 (encoding a NAM, ATAF, and CUC (NAC)-type transcription factor). Following drought stress, survival rates of the pyramided transgenic seedlings reached 62-66%, while wild-type and single transgene seedling survival rates were 23% and 37-42%, respectively. Maize seedlings co-expressing ZmVPP1 and ZmNAC111 exhibited higher photosynthesis rates, antioxidant enzyme activities, and root-shoot ratios than the wild type, and anthesis-silking intervals were shorter while grain yields were higher under water deficit conditions in field trials. Additionally, RNA-sequencing analysis confirmed that photosynthesis and stress-related metabolic processes were stimulated in the dual transgene plants under drought conditions. The findings in this work illustrate how high co-expression of different drought-related genes can reinforce drought resistance over that of individual transgene lines, providing a path for developing arid climate-adapted elite maize varieties.


Asunto(s)
Resistencia a la Sequía , Zea mays , Zea mays/metabolismo , Plantas Modificadas Genéticamente/genética , Plantas Modificadas Genéticamente/metabolismo , Plantones/metabolismo , Agua/metabolismo
13.
Mol Plant ; 15(10): 1558-1574, 2022 10 03.
Artículo en Inglés | MEDLINE | ID: mdl-36045577

RESUMEN

While crop yields have historically increased, drought resistance has become a major concern in the context of global climate change. The trade-off between crop yield and drought resistance is a common phenomenon; however, the underlying molecular modulators remain undetermined. Through genome-wide association study, we revealed that three non-synonymous variants in a drought-resistant allele of ZmSRO1d-R resulted in plasma membrane localization and enhanced mono-ADP-ribosyltransferase activity of ZmSRO1d toward ZmRBOHC, which increased reactive oxygen species (ROS) levels in guard cells and promoted stomatal closure. ZmSRO1d-R enhanced plant drought resilience and protected grain yields under drought conditions, but it led to yield drag under favorable conditions. In contrast, loss-of-function mutants of ZmRBOHC showed remarkably increased yields under well-watered conditions, whereas they showed compromised drought resistance. Interestingly, by analyzing 189 teosinte accessions, we found that the ZmSRO1d-R allele was present in teosinte but was selected against during maize domestication and modern breeding. Collectively, our work suggests that the allele frequency reduction of ZmSRO1d-R in breeding programs may have compromised maize drought resistance while increased yields. Therefore, introduction of the ZmSRO1d-R allele into modern maize cultivars would contribute to food security under drought stress caused by global climate change.


Asunto(s)
Sequías , Zea mays , ADP Ribosa Transferasas/metabolismo , Estudio de Asociación del Genoma Completo , Fitomejoramiento , Especies Reactivas de Oxígeno/metabolismo , Zea mays/genética , Zea mays/metabolismo
14.
Environ Sci Pollut Res Int ; 28(9): 11323-11332, 2021 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-33118066

RESUMEN

The strain SCPG-7 was isolated from saline soil in a cotton field. It is confirmed that the strain SCPG-7 is Pseudomonas sp. by means of the analysis of its phenotypic features and 16S rRNA sequence. SCPG-7 was capable of dissolving mineral tri-calcium phosphate (Ca3(PO4)2) and tri-magnesium phosphate (Mg3(PO4)2). In contrast, no showing iron phosphate (FePO4) or aluminum phosphate (AlPO4) solubilizing activities were detected by this experimental approach. The ratio of the dissolved P diameter to the colony diameter was 1.86. To study the phosphate dissolving mechanisms of the strain, we analyzed the changes of the pH value, the soluble phosphate content, the concentration of alkaline phosphatase, and the production of organic acid in the insoluble phosphate liquid medium. 2-keto-D-gluconicacid, α-ketoglutaric acid, succinic acid, etc. were characterized by LC-MS/MS in NBRIP medium. The concentration of 2-keto-D-gluconicacid increased to 88.6 mg/L after being cultured for 216 h. The strain decreased the pH value of the medium from 7.4 to 4.7 and the released soluble phosphate up to 516 mg/L, which proved the production of organic acids and alkaline phosphatase to be mechanism for solubilizing P. Under low phosphorus stress, Pseudomonas global regulatory protein PhoB regulates the transcription of the alkaline phosphatase gene. IAA and siderophore were secreted by SCPG-7. After treatment with SCPG-7, the individual plant height and dry weight of pepper increased by 23.3 and 31.2%, respectively, compared to the control group. The results show that the strain SCPG-7 has the potential to convert insoluble inorganic phosphorus to plant-available phosphorus. It can enhance soil phosphorus release through biological pathways, thereby increasing crop yield, and providing germplasm resources for the development of biological fertilizers.


Asunto(s)
Capsicum , Cromatografía Liquida , Fosfatos , ARN Ribosómico 16S , Microbiología del Suelo , Espectrometría de Masas en Tándem
15.
Genome Biol ; 21(1): 163, 2020 07 06.
Artículo en Inglés | MEDLINE | ID: mdl-32631406

RESUMEN

BACKGROUND: Gene expression is a key determinant of cellular response. Natural variation in gene expression bridges genetic variation to phenotypic alteration. Identification of the regulatory variants controlling the gene expression in response to drought, a major environmental threat of crop production worldwide, is of great value for drought-tolerant gene identification. RESULTS: A total of 627 RNA-seq analyses are performed for 224 maize accessions which represent a wide genetic diversity under three water regimes; 73,573 eQTLs are detected for about 30,000 expressing genes with high-density genome-wide single nucleotide polymorphisms, reflecting a comprehensive and dynamic genetic architecture of gene expression in response to drought. The regulatory variants controlling the gene expression constitutively or drought-dynamically are unraveled. Focusing on dynamic regulatory variants resolved to genes encoding transcription factors, a drought-responsive network reflecting a hierarchy of transcription factors and their target genes is built. Moreover, 97 genes are prioritized to associate with drought tolerance due to their expression variations through the Mendelian randomization analysis. One of the candidate genes, Abscisic acid 8'-hydroxylase, is verified to play a negative role in plant drought tolerance. CONCLUSIONS: This study unravels the effects of genetic variants on gene expression dynamics in drought response which allows us to better understand the role of distal and proximal genetic effects on gene expression and phenotypic plasticity. The prioritized drought-associated genes may serve as direct targets for functional investigation or allelic mining.


Asunto(s)
Regulación de la Expresión Génica de las Plantas/genética , Osmorregulación/genética , Sitios de Carácter Cuantitativo , Elementos Reguladores de la Transcripción , Zea mays/genética , Ácido Abscísico , Sequías , Estudio de Asociación del Genoma Completo , Análisis de la Aleatorización Mendeliana , Factores de Transcripción/genética , Agua/administración & dosificación , Zea mays/metabolismo
16.
Environ Health Perspect ; 116(2): 203-8, 2008 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-18288319

RESUMEN

BACKGROUND: 1,3-Butadiene (BD) is an important industrial chemical and an environmental and occupational pollutant. The carcinogenicity of BD in rodents has been proved, but its carcinogenic and mutagenic molecular mechanism(s) are not fully elucidated in humans. OBJECTIVES: In the present study, we compared the mutation frequencies and exon deletions of BD-exposed workers with that of control subjects in China to identify the characteristic mutations associated with BD exposure in the human HPRT (hypoxanthine-guanine-phosphoribosyltransferase) gene. METHODS: Seventy-four workers exposed to BD via inhalation and 157 matched controls were evaluated in Nanjing, China. Molecular analysis of HPRT mutant T lymphocytes from BD-exposed workers and nonexposed control subjects was conducted to identify changes in the structure of the HPRT gene. A total of 783 HPRT mutants were analyzed by multiplex polymerase chain reaction, in which 368 HPRT mutants were isolated from BD-exposed workers and 415 mutants from control subjects. RESULTS: The BD-exposed workers showed a higher mutation frequency (18.2 +/- 9.4 x 10(-6)) than the control subjects (12.7 +/- 7.3 x 10(-6)), but the difference was not significant (p > 0.05). The frequency of exon deletions in BD-exposed workers (27.4%) was significantly higher than that in control subjects (12.5%) (p < 0.05), which mainly included multiplex exon deletions (2-8 exons). CONCLUSIONS: The results of the present study suggest that BD should increase the frequency of large deletions of HPRT gene in human lymphocytes This change confirms and supports the previous findings in BD-exposed workers.


Asunto(s)
Hipoxantina Fosforribosiltransferasa/genética , Linfocitos/enzimología , Mutación , Exposición Profesional , China , Femenino , Humanos , Masculino , Reacción en Cadena de la Polimerasa
17.
Mutagenesis ; 23(4): 309-15, 2008 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-18407966

RESUMEN

Acrylamide (AA) is a compound widely used in many industries around the world. The recent finding that it is formed naturally in foods by heating raises human health concerns. AA is a proven carcinogen in animals and a probable carcinogen in humans, while its mutagenicity detected using in vitro mammalian gene mutation assays is still inconsistent in different cell systems. In the present study, we investigated the mutagenicity of AA in human promyelocytic leukaemia cells, HL-60 and NB4 cells, by examining the mutations at the hypoxanthine-guanine phosphoribosyltransferase (HPRT) gene locus. In a 6-h treatment without the exogenous activation, AA exerted a weak mutagenic effect at the highest concentration used in the study (700 mg/l) in HL-60 cells (P < 0.01) as well as in NB4 cells (P < 0.05). Molecular analysis of AA-induced mutants revealed a different mutation spectrum, when compared to that of spontaneous mutants. The most frequent spontaneous mutations were point mutations, whereas AA-induced mutations were mainly single exon deletions besides point mutations, and an increase in the proportion of partial deletion was associated with the increase of AA treatment. There was no obvious difference in the mutation spectra observed between the HL-60 and NB4 cell lines. These results showed that AA has a weak mutagenic effect at HPRT gene locus in human promyelocytic leukaemia HL-60 and NB4 cell lines and those molecular mutation spectra (single exon deletions and point mutations) may be related to some specific and precise mechanism.


Asunto(s)
Acrilamida/toxicidad , Hipoxantina Fosforribosiltransferasa/genética , Leucemia Promielocítica Aguda/genética , Mutación/efectos de los fármacos , Línea Celular Tumoral , Análisis Mutacional de ADN , Relación Dosis-Respuesta a Droga , Exones , Eliminación de Gen , Células HL-60 , Humanos , Leucemia Promielocítica Aguda/patología , Pruebas de Mutagenicidad , Reacción en Cadena de la Polimerasa
18.
Toxicol In Vitro ; 22(1): 116-27, 2008 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-17935941

RESUMEN

Okadaic acid (OA) is a tumor promoter in two-stage carcinogenesis experiments. Nevertheless, the effects of OA on cell transformation, cell proliferation and apoptosis vary widely, and the molecular events underlying these effects of OA are not well understood. In the present study, we examined the promoting activity and the associated effects on cell growth and apoptosis mediated by OA in BALB/c 3T3 cells, and evaluated alterations of gene transcriptional expression by microarray analysis. The promoting activity of OA was estimated by a two-stage transformation assay, in which cells were treated first with a low dose of the initiator N-methyl-N'-nitro-N-nitrosoguanidine (MNNG) and then with OA for 14 days. It showed that OA, at concentrations of 7.8-31.3 ng/ml, enhanced the transformation of MNNG-treated cells. In the promotion phase, cells exposed to OA (7.8 ng/ml) grew slowly for the first 2 days and subsequently died. As determined by Hoechst 33342 fluorescent dye and Annexin-V/PI dual-colored flow cytometry, OA induced morphologically apoptotic cells and increased the percentage of early apoptotic cells. The gene expression profile induced by OA at five time points in the promotion phase was determined by use of a specific mouse toxicological microarray containing 1796 clones, and a total of 177 differentially expressed genes were identified. By gene ontology analysis, 31 of these were determined to be functionally involved with cell growth and/or maintenance. In this group, numerous genes associated with the cell proliferation and cell cycle progression were down-regulated at early and/or middle time points. Among these was a subset of genes associated with apoptosis, in which Bnip3, Cycs, Casp3 and Bag1 genes are involved in the mitochondrial pathway of apoptosis. Ier3, Mdm2 and Bnip3 genes may be p53 targets. Furthermore, real-time PCR confirmed the expression changes of five genes selected at random from the differentially expressed genes. We conclude that OA induces cell growth inhibition and apoptosis in the two-stage, MNNG-initiated transformation of BALB/c 3T3 cells. The results of gene expression profile analysis imply that multiple molecular pathways are involved in OA-induced proliferation inhibition and apoptosis. Mitochondrial and p53-associated apoptotic pathways also may contribute to OA-induced apoptosis.


Asunto(s)
Carcinógenos/toxicidad , Transformación Celular Neoplásica/efectos de los fármacos , Regulación de la Expresión Génica/efectos de los fármacos , Ácido Ocadaico/toxicidad , Células 3T3 , Animales , Apoptosis/efectos de los fármacos , Apoptosis/genética , Carcinógenos/administración & dosificación , Ciclo Celular/efectos de los fármacos , Proliferación Celular/efectos de los fármacos , Relación Dosis-Respuesta a Droga , Metilnitronitrosoguanidina/farmacología , Ratones , Ratones Endogámicos BALB C , Mitocondrias/metabolismo , Ácido Ocadaico/administración & dosificación , Análisis de Secuencia por Matrices de Oligonucleótidos , Factores de Tiempo , Proteína p53 Supresora de Tumor/metabolismo
19.
Wei Sheng Yan Jiu ; 37(5): 540-2, 2008 Sep.
Artículo en Zh | MEDLINE | ID: mdl-19069647

RESUMEN

OBJECTIVE: To take Cuntan (Yangtze River) and Daxigou (Jialing River) as the representative, in order to study the cytochrome P450 1A1 (CYP1A1) gene expression in H4IIE cell treated with the organic pollutants in Chongqing source water between 2004 and 2005. METHODS: The organic pollutants were extracted with solid phase extraction, dissolved the organic pollutants in dimethyl sulphoxide (DMSO) . The H4IIE cell was treated with the extracts. The differences of CYP1A1 mRNA expression among different treatment groups were detected by reverse transcriptase-polymerase chain reaction (RT-PCR). The activities of CYP1A1 promotor were deteceted by electrophoretic mobility shift assay (EMSA). Results CYP1A1 mRNA expressions in H4IIE cells were observed in all the groups at the time of 12h and 24h, as well as in the 2005.01 Daxigon and 2005.01 Cuntan treated groups at the time of 48h, hut were not observed in all the groups at the time of 72h. The aryl hydrocarbon receptor-aryl hydrocarbon receptor nuclear translocator (AhR-ARNT) heterdimers were observed in all groups at the time of 24h. CONCLUSION: All samples could induce the activity of the CYP1A1 gene promoter XRE, and could induce the expression of CYP1A1 mRNA, hut the quantities of CYP1A1 mRNA expression were different according to the different treating time.


Asunto(s)
Citocromo P-450 CYP1A1/metabolismo , Neoplasias Hepáticas/metabolismo , Compuestos Orgánicos/toxicidad , Contaminantes Químicos del Agua/toxicidad , Animales , Línea Celular Tumoral , China , Ciudades , Citocromo P-450 CYP1A1/genética , Neoplasias Hepáticas/patología , ARN Mensajero/genética , ARN Mensajero/metabolismo , Ratas , Ríos/química
20.
Nat Genet ; 48(10): 1233-41, 2016 10.
Artículo en Inglés | MEDLINE | ID: mdl-27526320

RESUMEN

Maize production is threatened by drought stress worldwide. Identification of the genetic components underlying drought tolerance in maize is of great importance. Here we report a genome-wide association study (GWAS) of maize drought tolerance at the seedling stage that identified 83 genetic variants, which were resolved to 42 candidate genes. The peak GWAS signal showed that the natural variation in ZmVPP1, encoding a vacuolar-type H(+) pyrophosphatase, contributes most significantly to the trait. Further analysis showed that a 366-bp insertion in the promoter, containing three MYB cis elements, confers drought-inducible expression of ZmVPP1 in drought-tolerant genotypes. Transgenic maize with enhanced ZmVPP1 expression exhibits improved drought tolerance that is most likely due to enhanced photosynthetic efficiency and root development. Taken together, this information provides important genetic insights into the natural variation of maize drought tolerance. The identified loci or genes can serve as direct targets for both genetic engineering and selection for maize trait improvement.


Asunto(s)
Genes de Plantas , Variación Genética , Pirofosfatasas/genética , Zea mays/genética , Adaptación Biológica/genética , Sequías , Estudio de Asociación del Genoma Completo , Plantas Modificadas Genéticamente , Pirofosfatasas/fisiología , Plantones/genética , Plantones/fisiología , Estrés Fisiológico , Zea mays/fisiología
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