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1.
BMC Bioinformatics ; 24(1): 273, 2023 Jul 01.
Artículo en Inglés | MEDLINE | ID: mdl-37393255

RESUMEN

Pathogenic bacteria present a major threat to human health, causing various infections and illnesses, and in some cases, even death. The accurate identification of these bacteria is crucial, but it can be challenging due to the similarities between different species and genera. This is where automated classification using convolutional neural network (CNN) models can help, as it can provide more accurate, authentic, and standardized results.In this study, we aimed to create a larger and balanced dataset by image patching and applied different variations of CNN models, including training from scratch, fine-tuning, and weight adjustment, and data augmentation through random rotation, reflection, and translation. The results showed that the best results were achieved through augmentation and fine-tuning of deep models. We also modified existing architectures, such as InceptionV3 and MobileNetV2, to better capture complex features. The robustness of the proposed ensemble model was evaluated using two data splits (7:2:1 and 6:2:2) to see how performance changed as the training data was increased from 10 to 20%. In both cases, the model exhibited exceptional performance. For the 7:2:1 split, the model achieved an accuracy of 99.91%, F-Score of 98.95%, precision of 98.98%, recall of 98.96%, and MCC of 98.92%. For the 6:2:2 split, the model yielded an accuracy of 99.94%, F-Score of 99.28%, precision of 99.31%, recall of 98.96%, and MCC of 99.26%. This demonstrates that automatic classification using the ensemble model can be a valuable tool for diagnostic staff and microbiologists in accurately identifying pathogenic bacteria, which in turn can help control epidemics and minimize their social and economic impact.


Asunto(s)
Epidemias , Humanos , Redes Neurales de la Computación
2.
Sensors (Basel) ; 19(3)2019 Jan 23.
Artículo en Inglés | MEDLINE | ID: mdl-30678121

RESUMEN

This paper proposes an improved Traffic Class Prioritization based Carrier Sense Multiple Access/Collision Avoidance (TCP-CSMA/CA) scheme for prioritized channel access to heterogenous-natured Bio-Medical Sensor Nodes (BMSNs) for IEEE 802.15.4 Medium Access Control (MAC) in intra-Wireless Body Area Networks (WBANs). The main advantage of the scheme is to provide prioritized channel access to heterogeneous-natured BMSNs of different traffic classes with reduced packet delivery delay, packet loss, and energy consumption, and improved throughput and packet delivery ratio (PDR). The prioritized channel access is achieved by assigning a distinct, minimized and prioritized backoff period range to each traffic class in every backoff during contention. In TCP-CSMA/CA, the BMSNs are distributed among four traffic classes based on the existing patient's data classification. The Backoff Exponent (BE) starts from 1 to remove the repetition of the backoff period range in the third, fourth, and fifth backoffs. Five moderately designed backoff period ranges are proposed to assign a distinct, minimized, and prioritized backoff period range to each traffic class in every backoff during contention. A comprehensive verification using NS-2 was carried out to determine the performance of the TCP-CSMA/CA in terms of packet delivery delay, throughput, PDR, packet loss ratio (PLR) and energy consumption. The results prove that the proposed TCP-CSMA/CA scheme performs better than the IEEE 802.15.4 based PLA-MAC, eMC-MAC, and PG-MAC as it achieves a 47% decrease in the packet delivery delay and a 63% increase in the PDR.

3.
Sensors (Basel) ; 18(10)2018 Sep 26.
Artículo en Inglés | MEDLINE | ID: mdl-30261628

RESUMEN

Recent technological advancement in wireless communication has led to the invention of wireless body area networks (WBANs), a cutting-edge technology in healthcare applications. WBANs interconnect with intelligent and miniaturized biomedical sensor nodes placed on human body to an unattended monitoring of physiological parameters of the patient. These sensors are equipped with limited resources in terms of computation, storage, and battery power. The data communication in WBANs is a resource hungry process, especially in terms of energy. One of the most significant challenges in this network is to design energy efficient next-hop node selection framework. Therefore, this paper presents a green communication framework focusing on an energy aware link efficient routing approach for WBANs (ELR-W). Firstly, a link efficiency-oriented network model is presented considering beaconing information and network initialization process. Secondly, a path cost calculation model is derived focusing on energy aware link efficiency. A complete operational framework ELR-W is developed considering energy aware next-hop link selection by utilizing the network and path cost model. The comparative performance evaluation attests the energy-oriented benefit of the proposed framework as compared to the state-of-the-art techniques. It reveals a significant enhancement in body area networking in terms of various energy-oriented metrics under medical environments.

4.
PLoS One ; 14(12): e0225518, 2019.
Artículo en Inglés | MEDLINE | ID: mdl-31790457

RESUMEN

This paper proposes an emergency Traffic Adaptive MAC (eTA-MAC) protocol for WBANs based on Prioritization. The main advantage of the protocol is to provide traffic ranking through a Traffic Class Prioritization-based slotted-Carrier Sense Multiple Access/Collision Avoidance (TCP-CSMA/CA) scheme. The emergency traffic is handled through Emergency Traffic Class Provisioning-based slotted-CSMA/CA (ETCP-CSMA/CA) scheme. The emergency-based traffic adaptivity is provided through Emergency-based Traffic Adaptive slotted-CSMA/CA (ETA-CSMA/CA) scheme. The TCP-CSMA/CA scheme assigns a distinct, minimized and prioritized backoff period range to each traffic class in every backoff during channel access in Contention Access Period (CAP). The ETCP-CSMA/CA scheme delivers the sporadic emergency traffic that occurs at a single or multiple BMSN(s) instantaneously, with minimum delay and packet loss. It does this while being aware of normal traffic in the CAP. Then, the ETA-CSMA/CA scheme creates a balance between throughput and energy in the sporadic emergency situation with energy preservation of normal traffic BMSNs. The proposed protocol is evaluated using NS-2 simulator. The results indicate that the proposed protocol is better than the existing Medium Access Control (MAC) protocols by 86% decrease in packet delivery delay, 61% increase in throughput, and a 76% decrease in energy consumption.


Asunto(s)
Sistemas de Comunicación entre Servicios de Urgencia , Tecnología de Sensores Remotos/métodos , Dispositivos Electrónicos Vestibles , Tecnología Inalámbrica/instrumentación , Algoritmos , Humanos , Tecnología de Sensores Remotos/instrumentación , Factores de Tiempo
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