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1.
Molecules ; 29(2)2024 Jan 05.
Artículo en Inglés | MEDLINE | ID: mdl-38257197

RESUMEN

Peptide-protein interactions form a cornerstone in molecular biology, governing cellular signaling, structure, and enzymatic activities in living organisms. Improving computational models and experimental techniques to describe and predict these interactions remains an ongoing area of research. Here, we present a computational method for peptide-protein interactions' description and prediction based on leveraged amino acid frequencies within specific binding cores. Utilizing normalized frequencies, we construct quantitative matrices (QMs), termed 'logo models' derived from sequence logos. The method was developed to predict peptide binding to HLA-DQ2.5 and HLA-DQ8.1 proteins associated with susceptibility to celiac disease. The models were validated by more than 17,000 peptides demonstrating their efficacy in discriminating between binding and non-binding peptides. The logo method could be applied to diverse peptide-protein interactions, offering a versatile tool for predictive analysis in molecular binding studies.


Asunto(s)
Enfermedad Celíaca , Péptidos , Humanos , Aminoácidos , Biología Molecular , Posición Específica de Matrices de Puntuación
2.
Crit Rev Food Sci Nutr ; 61(19): 3267-3278, 2021.
Artículo en Inglés | MEDLINE | ID: mdl-32744076

RESUMEN

Oro-gastrointestinal digestion of dietary carbohydrates involves up to six different carbohydrases in a multistage process. Enzymes from the small intestinal brush border membrane play a major role in the digestibility of these substrates. However, to date, the inclusion of these small intestinal enzymes has been dismissed in most in vitro studies carried out, despite their importance in the degradation of carbohydrates. Several in vitro and in vivo studies have demonstrated the capability of brush border enzymes to degrade certain "non-digestible" carbohydrates to a different extent depending on their structural composition (monomeric composition, glycosidic linkage, etc.). In this sense, considering the available evidence, mucosal disaccharidases embedded in the small intestinal brush border membrane vesicles must be considered in addition to α-amylases; therefore, new approaches for the evaluation of the digestibility of carbohydrates have been recently reported. These new methods based on the utilization of the small intestinal enzymes present in the brush border membrane aim to fulfill the final and key step of the digestion of carbohydrates in the small intestine. Here, rat small intestinal extract enzymes as well as brush border membrane vesicles from pig have emerged as very reliable and useful tools to evaluate carbohydrate digestion. Thus, this review aims to go briefly through the most relevant digestion methods for carbohydrates that are currently available and to highlight the new improved methods, which include mammalian intestinal enzymes, and their current use in the evaluation of the digestibility of prebiotics.


Asunto(s)
Digestión , Prebióticos , Animales , Carbohidratos de la Dieta , Intestino Delgado , Microvellosidades , Ratas , Porcinos
3.
Vet Res ; 52(1): 99, 2021 Jul 02.
Artículo en Inglés | MEDLINE | ID: mdl-34215335

RESUMEN

The immunomodulatory capacity of F. hepatica antigens is probably one of the main reasons for the development of a driven non-protective Th2 immune response. In this study, we analysed the cellular response of hepatic lymph node cells and CD4+ T cells in terms of proliferative response, efficiency of antigen presentation and cytokine production, to F. hepatica-derived molecules, at early and late stages of the infection. Thirty-one sheep were allocated into five groups and were slaughtered at 16 dpi and 23 wpi. In order to analyse antigen-specific response, the following F. hepatica recombinant molecules were used: rFhCL1, rFhCL2, rFhCL3, rFhCB1, rFhCB2, rFhCB3, rFhStf-1, rFhStf-2, rFhStf-3 and rFhKT1. A cell proliferation assay using hepatic lymph node cells and an antigen presentation cell assay using CD4+ T cells were performed. At 16 dpi, all molecules but rFhStf-2 and rFhKT1 elicited a significant cell proliferative response on hepatic lymph node cells of infected animals. At both early and late stage of the infection, antigen presentation of rFhCB3 and rFhCL2 resulted in higher stimulation index of CD4+ T cells which was IL-2 mediated, although no statistically significant when compared to uninfected animals. Significant cytokine production (IL-4, IL-10 and IFN-γ) was conditioned by the antigen-specific cell stimulation. No CD4+ T cell exhaustion was detected in infected sheep at the chronic stage of the infection. This study addressed antigen-specific response to F. hepatica-derived molecules that are involved in key aspects of the parasite survival within the host.


Asunto(s)
Antígenos Helmínticos/inmunología , Fascioliasis/veterinaria , Ganglios Linfáticos/inmunología , Enfermedades de las Ovejas/inmunología , Linfocitos T/inmunología , Animales , Fasciola hepatica/fisiología , Fascioliasis/inmunología , Fascioliasis/parasitología , Hígado/inmunología , Masculino , Ovinos , Enfermedades de las Ovejas/parasitología , Oveja Doméstica
4.
Microb Cell Fact ; 18(1): 183, 2019 Oct 26.
Artículo en Inglés | MEDLINE | ID: mdl-31655584

RESUMEN

BACKGROUND: α-Amylases specifically catalyse the hydrolysis of the internal α-1, 4-glucosidic linkages of starch. Glycoside hydrolase (GH) family 13 is the main α-amylase family in the carbohydrate-active database. Lactobacillus plantarum WCFS1 possesses eleven proteins included in GH13 family. Among these, proteins annotated as maltose-forming α-amylase (Lp_0179) and maltogenic α-amylase (Lp_2757) were included. RESULTS: In this study, Lp_0179 and Lp_2757 L. plantarum α-amylases were structurally and biochemically characterized. Lp_2757 displayed structural features typical of GH13_20 subfamily which were absent in Lp_0179. Genes encoding Lp_0179 (Amy2) and Lp_2757 were cloned and overexpressed in Escherichia coli BL21(DE3). Purified proteins showed high hydrolytic activity on pNP-α-D-maltopyranoside, being the catalytic efficiency of Lp_0179 remarkably higher. In relation to the hydrolysis of starch-related carbohydrates, Lp_0179 only hydrolysed maltopentaose and dextrin, demonstrating that is an exotype glucan hydrolase. However, Lp_2757 was also able to hydrolyze cyclodextrins and other non-cyclic oligo- and polysaccharides, revealing a great preference towards α-1,4-linkages typical of maltogenic amylases. CONCLUSIONS: The substrate range as well as the biochemical properties exhibited by Lp_2757 maltogenic α-amylase suggest that this enzyme could be a very promising enzyme for the hydrolysis of α-1,4 glycosidic linkages present in a broad number of starch-carbohydrates, as well as for the investigation of an hypothetical transglucosylation activity under appropriate reaction conditions.


Asunto(s)
Proteínas Bacterianas/química , Glicósido Hidrolasas/química , Lactobacillus plantarum/metabolismo , alfa-Amilasas/química , Clonación Molecular , Escherichia coli/genética , Polisacáridos/metabolismo , Almidón/metabolismo , Especificidad por Sustrato
5.
Molecules ; 24(3)2019 Jan 22.
Artículo en Inglés | MEDLINE | ID: mdl-30678271

RESUMEN

In this work, the efficient extraction of pectin from sugar beet by-products (pressed, ensiled and dried pulp), by using an acid method or a commercial cellulose, is accomplished. The extraction method had an impact on the pectin monomeric composition, mainly in xylose, arabinose, and galacturonic acid content, as determined by GC-FID. FTIR and SEC analyses allowed the determination of similar degrees of methoxylation and molecular weights, respectively, in the extracted pectins. The acid extraction of pectin in the ensiled by-product led to the highest yield (19%) with a galacturonic acid content of 46%, whereas the application of the enzymatic extraction method resulted in a lower yield (13%) but higher galacturonic acid content (72%). Moreover, the stability in aqueous solution as well as the emulsifying activity index was higher for pectin extracted by the acid method, whereas the viscosity was higher in pectin extracted by the enzymatic method. To the best of our knowledge, this is the first study analyzing the physicochemical properties and exploring the potential reuse of ensiled and dried by-products from sugar beet industry for the extraction of pectin to be further used in the food and pharmaceutical areas.


Asunto(s)
Beta vulgaris/química , Estructura Molecular , Pectinas/química , Extractos Vegetales/química , Viscosidad , Peso Molecular , Pectinas/aislamiento & purificación , Fitoquímicos/química , Extractos Vegetales/aislamiento & purificación , Espectroscopía Infrarroja por Transformada de Fourier
6.
J Sci Food Agric ; 99(2): 868-876, 2019 Jan 30.
Artículo en Inglés | MEDLINE | ID: mdl-30009444

RESUMEN

BACKGROUND: Industrial extraction of orange juice produces a large amount of waste that affects the environment and gives rise to important economic losses; at the same time, information about the composition of the waste is still limited. The present study carried out an exhaustive chemical and physicochemical characterization of the residues in the waste, aiming to increase their potential application for the extraction of functional ingredients. RESULTS: Four different products (three solids and one liqueur) were provided by the industry. The overall characterization indicated that carbohydrates comprised the main components. During processing, carbohydrate derivatives were formed such as those corresponding to the initial steps of the Maillard reaction. In this sense, furosine was demonstrated to be a suitable indicator with respect to the control of the process. Although the phenolic content substantially decreased (by up to 57%) as the processing proceeded, the antioxidant capacity was affected to a much lesser extent (∼10%). Dehydrated products were rich in galacturonic acid and hardly any change was detected during their elaboration. The liqueur by-product was found to have a much higher level of fructose than glucose and sucrose. CONCLUSION: Orange juice waste obtained industrially under the conditions described in the present study could be used as a source of pectic derivatives or fructose in the case of solid or liquid by-products, respectively. The results reported here could diversify the present application of these products as a source of food ingredients, contributing to an improvement in their utilization. © 2018 Society of Chemical Industry.


Asunto(s)
Citrus sinensis/química , Residuos Industriales/análisis , Extractos Vegetales/análisis , Residuos/análisis , Antioxidantes/análisis , Fructosa/análisis , Frutas/química , Glucosa/análisis , Lisina/análogos & derivados , Lisina/análisis , Fenoles/análisis
7.
Appl Microbiol Biotechnol ; 100(14): 6251-6263, 2016 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-26940051

RESUMEN

A new process based on enzymatic synthesis of a series of raffinose-derived oligosaccharides or raffinosyl-oligofructosides (RFOS) with degree of polymerization (DP) from 4 to 8 was developed in the presence of raffinose. This process involves a transfructosylation reaction catalyzed by an inulosucrase from Lactobacillus gasseri DSM 20604 (IS). The main synthesized RFOS were structurally characterized by nuclear magnetic resonance (NMR). According to the elucidated structures, RFOS consist of ß-2,1-linked fructose unit(s) to raffinose: α-D-galactopyranosyl-(1 → 6)-α-D-glucopyranosyl-(1↔2)-ß-D-fructofuranosyl-((1 ← 2)-ß-D-fructofuranoside)n (where n refers to the number of transferred fructose moieties). The maximum yield of RFOS was 33.4 % (in weight respect to the initial amount of raffinose) and was obtained at the time interval of 8-24 h of transfructosylation reaction initiated with 50 % (w/v) of raffinose. Results revealed the high acceptor and donor affinity of IS towards raffinose, being fairly comparable with that of sucrose for the production of fructooligosaccharides (FOS), including when both carbohydrates coexisted (sucrose/raffinose mixture, 250 g L(-1) each). The production of RFOS was also attempted in the presence of sucrose/melibiose mixtures; in this case, the predominant acceptor-product formed was raffinose followed by a minor production of a series of oligosaccharides with varying DP. The easiness of RFOS synthesis and the structural similarities with both raffinose and fructan series of oligosaccharides warrant the further study of the potential bioactive properties of these unexplored oligosaccharides.


Asunto(s)
Hexosiltransferasas/metabolismo , Lactobacillus gasseri/enzimología , Rafinosa/química , Medios de Cultivo/química , Fructanos/química , Fructosa/química , Microbiología Industrial , Imagen por Resonancia Magnética , Melibiosa/química , Proteínas Recombinantes/metabolismo , Sacarosa/química
8.
Electrophoresis ; 35(11): 1519-34, 2014 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-24446419

RESUMEN

The increasing interest for prebiotic carbohydrates as functional food ingredients has promoted the synthesis of galactooligosaccharides and new lactose derivatives. This review provides a comprehensive overview on the chromatographic analysis, structural characterization, and bioactivity studies of lactose-derived oligosaccharides. The most common chromatographic techniques used for the separation and structural characterization of this type of oligosaccharides, including GC and HPLC in different operational modes, coupled to various detectors are discussed. Insights on oligosaccharide MS fragmentation patterns, using different ionization sources and mass analyzers, as well as data on structural analysis by NMR spectroscopy are also described. Finally, this article deals with the bioactive effects of galacto oligosaccharides and oligosaccharides derived from lactulose on the gastrointestinal and immune systems, which support their consumption to provide significant health benefits.


Asunto(s)
Lactosa/análogos & derivados , Lactosa/farmacología , Oligosacáridos/química , Oligosacáridos/farmacología , Prebióticos , Animales , Antiinfecciosos/química , Antiinfecciosos/metabolismo , Antiinfecciosos/farmacología , Cromatografía de Gases/métodos , Cromatografía Líquida de Alta Presión/métodos , Humanos , Factores Inmunológicos/química , Factores Inmunológicos/metabolismo , Factores Inmunológicos/farmacología , Lactosa/metabolismo , Metabolismo de los Lípidos/efectos de los fármacos , Espectrometría de Masas/métodos , Oligosacáridos/metabolismo , Prebióticos/análisis
9.
J Appl Toxicol ; 34(6): 714-25, 2014 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-24122917

RESUMEN

The incorporation of the natural mineral clay montmorillonite into polymeric systems enhances their barrier properties as well as their thermal and mechanical resistance, making them suitable for a wide range of industrial applications, e.g., in the food industry. Considering humans could easily be exposed to these clays due to migration into food, toxicological and health effects of clay exposure should be studied. In the present work, the cytotoxic effects induced by two different clays (the unmodified clay Cloisite(®) Na(+) , and the organically modified Cloisite(®) 30B) on Caco-2 cells were studied after 24 and 48 h of exposure. The basal cytotoxicity endpoints assessed were total protein content, neutral red uptake and a tetrazolium salt reduction. Our results showed that only Cloisite(®) 30B induced toxic effects. Therefore, the effects of subcytotoxic concentrations of this clay on the generation of intracellular reactive oxygen species, glutathione content and DNA damage (comet assay) were investigated. Results indicate that oxidative stress may be implicated in the toxicity induced by Closite(®) 30B, in regards of the increases in intracellular reactive oxygen species production and glutathione content at the highest concentration assayed, while no damage was observed in DNA. The most remarkable morphological alterations observed were dilated cisternae edge in the Golgi apparatus and nucleolar segregation, suggesting impairment in the secretory functions, which could be related to inhibition in the synthesis of proteins.


Asunto(s)
Silicatos de Aluminio/toxicidad , Bentonita/toxicidad , Colon/efectos de los fármacos , Células CACO-2 , Nucléolo Celular/metabolismo , Nucléolo Celular/ultraestructura , Forma de la Célula/efectos de los fármacos , Arcilla , Colon/metabolismo , Colon/ultraestructura , Daño del ADN , Relación Dosis-Respuesta a Droga , Glutatión/metabolismo , Aparato de Golgi/efectos de los fármacos , Aparato de Golgi/metabolismo , Aparato de Golgi/ultraestructura , Humanos , Estrés Oxidativo/efectos de los fármacos , Especies Reactivas de Oxígeno/metabolismo , Factores de Tiempo
10.
Food Chem Toxicol ; 187: 114638, 2024 May.
Artículo en Inglés | MEDLINE | ID: mdl-38582341

RESUMEN

With a society increasingly demanding alternative protein food sources, new strategies for evaluating protein safety issues, such as allergenic potential, are needed. Large-scale and systemic studies on allergenic proteins are hindered by the limited and non-harmonized clinical information available for these substances in dedicated databases. A missing key information is that representing the symptomatology of the allergens, especially given in terms of standard vocabularies, that would allow connecting with other biomedical resources to carry out different studies related to human health. In this work, we have generated the first resource with a comprehensive annotation of allergens' symptomatology, using a text-mining approach that extracts significant co-mentions between these entities from the scientific literature (PubMed, ∼36 million abstracts). The method identifies statistically significant co-mentions between the textual descriptions of the two types of entities in the literature as indication of relationship. 1,180 clinical signs extracted from the Human Phenotype Ontology, the Medical Subject Heading terms of PubMed together with other allergen-specific symptoms, were linked to 1,036 unique allergens annotated in two main allergen-related public databases via 14,009 relationships. This novel resource, publicly available through an interactive web interface, could serve as a starting point for future manually curated compilation of allergen symptomatology.


Asunto(s)
Alérgenos , Minería de Datos , Humanos , Minería de Datos/métodos , Bases de Datos Factuales , Proteínas/metabolismo
11.
Microb Biotechnol ; 17(5): e14443, 2024 May.
Artículo en Inglés | MEDLINE | ID: mdl-38722820

RESUMEN

Pectin structures have received increasing attention as emergent prebiotics due to their capacity to promote beneficial intestinal bacteria. Yet the collective activity of gut bacterial communities to cooperatively metabolize structural variants of this substrate remains largely unknown. Herein, the characterization of a pectin methylesterase, BpeM, from Bifidobacterium longum subsp. longum, is reported. The purified enzyme was able to remove methyl groups from highly methoxylated apple pectin, and the mathematical modelling of its activity enabled to tightly control the reaction conditions to achieve predefined final degrees of methyl-esterification in the resultant pectin. Demethylated pectin, generated by BpeM, exhibited differential fermentation patterns by gut microbial communities in in vitro mixed faecal cultures, promoting a stronger increase of bacterial genera associated with beneficial effects including Lactobacillus, Bifidobacterium and Collinsella. Our findings demonstrate that controlled pectin demethylation by the action of a B. longum esterase selectively modifies its prebiotic fermentation pattern, producing substrates that promote targeted bacterial groups more efficiently. This opens new possibilities to exploit biotechnological applications of enzymes from gut commensals to programme prebiotic properties.


Asunto(s)
Hidrolasas de Éster Carboxílico , Heces , Malus , Pectinas , Prebióticos , Malus/microbiología , Pectinas/metabolismo , Heces/microbiología , Hidrolasas de Éster Carboxílico/metabolismo , Hidrolasas de Éster Carboxílico/genética , Fermentación , Humanos , Bifidobacterium longum/metabolismo , Bifidobacterium longum/enzimología , Microbioma Gastrointestinal , Bifidobacterium/enzimología , Bifidobacterium/metabolismo
12.
Appl Environ Microbiol ; 79(13): 4129-40, 2013 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-23645191

RESUMEN

The ability of an inulosucrase (IS) from Lactobacillus gasseri DSM 20604 to synthesize fructooligosaccharides (FOS) and maltosylfructosides (MFOS) in the presence of sucrose and sucrose-maltose mixtures was investigated after optimization of synthesis conditions, including enzyme concentration, temperature, pH, and reaction time. The maximum formation of FOS, which consist of ß-2,1-linked fructose to sucrose, was 45% (in weight with respect to the initial amount of sucrose) and was obtained after 24 h of reaction at 55°C in the presence of sucrose (300 g liter(-1)) and 1.6 U ml(-1) of IS-25 mM sodium acetate buffer-1 mM CaCl2 (pH 5.2). The production of MFOS was also studied as a function of the initial ratios of sucrose to maltose (10:50, 20:40, 30:30, and 40:20, expressed in g 100 ml(-1)). The highest yield in total MFOS was attained after 24 to 32 h of reaction time and ranged from 13% (10:50 sucrose/maltose) to 52% (30:30 sucrose/maltose) in weight with respect to the initial amount of maltose. Nuclear magnetic resonance (NMR) structural characterization indicated that IS from L. gasseri specifically transferred fructose moieties of sucrose to either C-1 of the reducing end or C-6 of the nonreducing end of maltose. Thus, the trisaccharide erlose [α-d-glucopyranosyl-(1→4)-α-d-glucopyranosyl-(1→2)-ß-d-fructofuranoside] was the main synthesized MFOS followed by neo-erlose [ß-d-fructofuranosyl-(2→6)-α-d-glucopyranosyl-(1→4)-α-d-glucopyranose]. The formation of MFOS with a higher degree of polymerization was also demonstrated by the transfer of additional fructose residues to C-1 of either the ß-2,1-linked fructose or the ß-2,6-linked fructose to maltose, revealing the capacity of MFOS to serve as acceptors.


Asunto(s)
Reactores Biológicos , Hexosiltransferasas/metabolismo , Lactobacillus/enzimología , Oligosacáridos/biosíntesis , Trisacáridos/biosíntesis , Cromatografía de Afinidad , Cromatografía Liquida , Clonación Molecular , Cartilla de ADN/genética , Electroforesis en Gel de Poliacrilamida , Cromatografía de Gases y Espectrometría de Masas , Concentración de Iones de Hidrógeno , Espectroscopía de Resonancia Magnética , Maltosa , Colorantes de Rosanilina , Sacarosa , Temperatura , Factores de Tiempo
13.
J Sci Food Agric ; 93(7): 1591-7, 2013 May.
Artículo en Inglés | MEDLINE | ID: mdl-23096763

RESUMEN

BACKGROUND: Lactose from cheese whey permeate (WP) was efficiently isomerised to lactulose using egg shell, a food-grade catalyst, and the subsequent transgalactosylation reaction of this mixture with ß-galactosidase from Bacillus circulans gave rise to a wide array of prebiotic carbohydrates derived from lactose and lactulose. RESULTS: Lactulose obtained by efficient isomerisation of WP (16.1% by weight with respect to the initial amount of lactose) showed great resistance to the hydrolytic action of ß-galactosidase from B. circulans, which preferentially hydrolysed lactose, acting as a galactosyl donor and acceptor. Lactulose had capacity as an acceptor, leading to the formation of lactulose-derived oligosaccharides. The enzymatic synthesis was optimised by studying reaction conditions such as pH, temperature, time, enzyme concentration and carbohydrate concentration. The maximum formation of galactooligosaccharides with degrees of polymerisation from 2 to 4 was achieved after 5 h of reaction at pH 6.5 and 50 °C with 300 g kg(-1) carbohydrates and 3 U mL(-1) ß-galactosidase. CONCLUSION: These findings indicate that the transgalactosylation of isomerised WP with ß-galactosidase from B. circulans could be a new and efficient method to obtain a mixture with 50% of potentially prebiotic carbohydrates composed of lactulose, and galactooligosaccharides derived from lactose and lactulose.


Asunto(s)
Queso , Lactosa/metabolismo , Lactulosa/metabolismo , Proteínas de la Leche , Oligosacáridos/biosíntesis , Prebióticos , beta-Galactosidasa/metabolismo , Animales , Bacillus/enzimología , Carbohidratos de la Dieta/metabolismo , Cáscara de Huevo , Proteínas Fúngicas/metabolismo , Galactosa/metabolismo , Concentración de Iones de Hidrógeno , Isomerismo , Polimerizacion , Proteína de Suero de Leche
14.
Genes (Basel) ; 14(4)2023 04 19.
Artículo en Inglés | MEDLINE | ID: mdl-37107700

RESUMEN

Scientific knowledge is being accumulated in the biomedical literature at an unprecedented pace. The most widely used database with biomedicine-related article abstracts, PubMed, currently contains more than 36 million entries. Users performing searches in this database for a subject of interest face thousands of entries (articles) that are difficult to process manually. In this work, we present an interactive tool for automatically digesting large sets of PubMed articles: PMIDigest (PubMed IDs digester). The system allows for classification/sorting of articles according to different criteria, including the type of article and different citation-related figures. It also calculates the distribution of MeSH (medical subject headings) terms for categories of interest, providing in a picture of the themes addressed in the set. These MeSH terms are highlighted in the article abstracts in different colors depending on the category. An interactive representation of the interarticle citation network is also presented in order to easily locate article "clusters" related to particular subjects, as well as their corresponding "hub" articles. In addition to PubMed articles, the system can also process a set of Scopus or Web of Science entries. In summary, with this system, the user can have a "bird's eye view" of a large set of articles and their main thematic tendencies and obtain additional information not evident in a plain list of abstracts.


Asunto(s)
Bibliometría , Humanos , PubMed , Bases de Datos Factuales
15.
J Agric Food Chem ; 71(28): 10693-10700, 2023 Jul 19.
Artículo en Inglés | MEDLINE | ID: mdl-37409693

RESUMEN

Intestinal lactic acid bacteria can help alleviate lactose maldigestion by promoting lactose hydrolysis in the small intestine. This study shows that protein extracts from probiotic bacterium Lactiplantibacillus plantarum WCFS1 possess two metabolic pathways for lactose metabolism, involving ß-galactosidase (ß-gal) and 6Pß-galactosidase (6Pß-gal) activities. As L. plantarum WCFS1 genome lacks a putative 6Pß-gal gene, the 11 GH1 family proteins, in which their 6Pß-glucosidase (6Pß-glc) activity was experimentally demonstrated,, were assayed for 6Pß-gal activity. Among them, only Lp_3525 (Pbg9) also exhibited a high 6Pß-gal activity. The sequence comparison of this dual 6Pß-gal/6Pß-glc GH1 protein to previously described dual GH1 proteins revealed that L. plantarum WCFS1 Lp_3525 belonged to a new group of dual 6Pß-gal/6Pß-glc GH1 proteins, as it possessed conserved residues and structural motifs mainly present in 6Pß-glc GH1 proteins. Finally, Lp_3525 exhibited, under intestinal conditions, an adequate 6Pß-gal activity with possible relevance for lactose maldigestion management.


Asunto(s)
Lactobacillus plantarum , Probióticos , Galactosidasas/metabolismo , Glucosidasas/metabolismo , Lactosa/metabolismo , beta-Galactosidasa/genética , beta-Galactosidasa/metabolismo , Metabolismo de los Hidratos de Carbono , Bacterias/metabolismo , Lactobacillus plantarum/genética , Lactobacillus plantarum/metabolismo
16.
Microorganisms ; 11(6)2023 May 31.
Artículo en Inglés | MEDLINE | ID: mdl-37374967

RESUMEN

Considering the ban on the use of antibiotics as growth stimulators in the livestock industry, the use of microbiota modulators appears to be an alternative solution to improve animal performance. This review aims to describe the effect of different families of modulators on the gastrointestinal microbiota of poultry, pigs and ruminants and their consequences on host physiology. To this end, 65, 32 and 4 controlled trials or systematic reviews were selected from PubMed for poultry, pigs and ruminants, respectively. Microorganisms and their derivatives were the most studied modulator family in poultry, while in pigs, the micronutrient family was the most investigated. With only four controlled trials selected for ruminants, it was difficult to conclude on the modulators of interest for this species. For some modulators, most studies showed a beneficial effect on both the phenotype and the microbiota. This was the case for probiotics and plants in poultry and minerals and probiotics in pigs. These modulators seem to be a good way for improving animal performance.

17.
J Nutr ; 142(7): 1232-9, 2012 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-22649257

RESUMEN

A detailed study was performed to compare the in vivo ileal digestibility and modulatory effects in fecal microbiota of novel galacto-oligosaccharides (GOS) derived from lactulose [GOS-Lu; degree of polymerization (DP) ≥2, 14.0% trisaccharides] and commercial GOS derived from lactose (GOS-La; DP ≥3, 35.1% trisaccharides) in growing rats (5 wk old). Rats were fed either a control diet or diets containing 1% (wt:wt) of GOS-Lu or GOS-La for 14 d. Quantitative analysis of carbohydrates from dietary and ileal samples demonstrated that the trisaccharide fraction of GOS-Lu was significantly more resistant to gut digestion than that from GOS-La, as indicated by their ileal digestibility rates of 12.5 ± 2.6% and 52.9 ± 2.7%, respectively, whereas the disaccharide fraction of GOS-Lu was fully resistant to the extreme environment of the upper digestive tract. The low ileal digestibility of GOS-Lu was due to the great resistance of galactosyl-fructoses to mammalian digestive enzymes, highlighting the key role played by the monomer type and linkage involved in the oligosaccharide chain. The partial digestion of GOS-La trisaccharides showed that glycosidic linkages (1→6) and (1→2) between galactose and glucose monomers were significantly more resistant to in vivo gastrointestinal digestion than the linkage (1→4) between galactose units. The absence of GOS-La and GOS-Lu digestion-resistant oligosaccharides in fecal samples indicated that they were readily fermented within the large intestine, enabling both types of GOS to have a potential prebiotic function. Indeed, compared with controls, the GOS-Lu group had significantly more bifidobacteria in fecal samples after 14 d of treatment. The number of Eubacterium rectale also was greater in the GOS-Lu and GOS-La groups than in controls. These novel data support a direct relationship between patterns of resistance to digestion and prebiotic properties of GOS.


Asunto(s)
Carbohidratos de la Dieta/metabolismo , Digestión , Galactosa/metabolismo , Glicósidos/metabolismo , Íleon/metabolismo , Oligosacáridos/metabolismo , Prebióticos , Animales , Bifidobacterium/efectos de los fármacos , Colon/metabolismo , Enzimas/metabolismo , Eubacterium/efectos de los fármacos , Heces/química , Fermentación , Galactosa/química , Glucosa/química , Masculino , Oligosacáridos/química , Ratas , Ratas Wistar
18.
Benef Microbes ; 13(2): 95-168, 2022 06 18.
Artículo en Inglés | MEDLINE | ID: mdl-35729770

RESUMEN

Together with proteins and fats, carbohydrates are one of the macronutrients in the human diet. Digestible carbohydrates, such as starch, starch-based products, sucrose, lactose, glucose and some sugar alcohols and unusual (and fairly rare) α-linked glucans, directly provide us with energy while other carbohydrates including high molecular weight polysaccharides, mainly from plant cell walls, provide us with dietary fibre. Carbohydrates which are efficiently digested in the small intestine are not available in appreciable quantities to act as substrates for gut bacteria. Some oligo- and polysaccharides, many of which are also dietary fibres, are resistant to digestion in the small intestines and enter the colon where they provide substrates for the complex bacterial ecosystem that resides there. This review will focus on these non-digestible carbohydrates (NDC) and examine their impact on the gut microbiota and their physiological impact. Of particular focus will be the potential of non-digestible carbohydrates to act as prebiotics, but the review will also evaluate direct effects of NDC on human cells and systems.


Asunto(s)
Microbioma Gastrointestinal , Probióticos , Bacterias/metabolismo , Carbohidratos de la Dieta/metabolismo , Fibras de la Dieta/metabolismo , Ecosistema , Humanos , Polisacáridos/metabolismo , Almidón/metabolismo
19.
J Agric Food Chem ; 70(49): 15531-15538, 2022 Dec 14.
Artículo en Inglés | MEDLINE | ID: mdl-36454042

RESUMEN

The hydrolysis of plant glucosinolates by myrosinases (thioglucosidases) originates metabolites with chemopreventive properties. In this study, the ability to hydrolyze the glucosinolate sinigrin by cultures or protein extracts of Lactiplantibacillus plantarum WCFS1 was assayed. This strain possesses myrosinase-like activity as sinigrin was partly hydrolyzed by induced cultures but not by protein extracts. The 11 glycoside hydrolase GH1 family proteins, annotated as 6-phospho-ß-glucosidases, were the proteins most similar to plant myrosinases. The activity of these proteins was assayed against sinigrin and synthetic glucosides. As expected, none of the proteins assayed possessed myrosinase activity against sinigrin or the synthetic ß-thio-glucoside derivative or against the ß-glucoside. However, all 11 proteins were active on the phosphorylated-ß-glucoside derivative. Moreover, only eight of these proteins were active on phospho-ß-thioglucose. These results supported that, in L. plantarum WCFS1, glucosinolates may undergo previous phosphorylation, and GH1 proteins are the glycosidases involved in the hydrolysis of phosphorylated glucosinolates.


Asunto(s)
Glucosinolatos , Glicósido Hidrolasas , Glucosinolatos/metabolismo , Glicósido Hidrolasas/genética , Glicósido Hidrolasas/metabolismo , Hidrólisis
20.
J Agric Food Chem ; 70(29): 9048-9056, 2022 Jul 27.
Artículo en Inglés | MEDLINE | ID: mdl-35830712

RESUMEN

This study was conducted to investigate the sweetness intensity and the potential fecal microbiome modulation of galactooligosaccharides in combination with enzymatically modified mogrosides (mMV-GOS), both generated through a patented single-pot synthesis. Sweetness intensity was performed in vivo by trained sensory panelists. The impact on the human fecal microbiome was evaluated by in vitro pH-controlled batch fermentation, and bacterial populations and organic acid concentrations were measured by qPCR and GC-FID, respectively. Significant growth (p ≤ 0.05) during the fermentation at 10 h of bacterial populations includes Bifidobacterium (8.49 ± 0.44 CFU/mL), Bacteroides (9.73 ± 0.32 CFU/mL), Enterococcus (8.17 ± 0.42 CFU/mL), and Clostridium coccoides (6.15 ± 0.11 CFU/mL) as compared to the negative control counts for each bacterial group (7.94 ± 0.27, 7.84 ± 1.11, 7.52 ± 0.37, and 5.81 ± 0.08 CFU/mL, respectively) at the same time of fermentation. Likewise, the corresponding significant increase in production of SCFA in mMV-GOS at 10 h of fermentation, mainly seen in acetate (20.32 ± 2.56 mM) and propionate (9.49 ± 1.44 mM) production compared to a negative control at the same time (8.15 ± 1.97 and 1.86 ± 0.24 mM), is in line with a positive control (short-chain fructooligosaccharides; 46.74 ± 12.13 and 6.51 ± 1.91 mM, respectively) revealing a selective fermentation. In conclusion, these substrates could be considered as novel candidate prebiotic sweeteners, foreseeing a feasible and innovative approach targeting the sucrose content reduction in food. This new ingredient could provide health benefits when evaluated in human studies by combining sweetness and prebiotic fiber functionality.


Asunto(s)
Ácidos Grasos Volátiles , Prebióticos , Bacterias/genética , Bifidobacterium , Heces/microbiología , Fermentación , Humanos , Oligosacáridos , Edulcorantes
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