RESUMEN
This work presents near-infrared Raman spectroscopy (FT-RS) and surface-enhanced Raman scattering (SERS) studies of three pyridine-α-hydroxymethyl biphenyl phosphine oxide isomers: (diphenylphosphoryl)(pyridin-2-yl)methanol (α-Py), (diphenylphosphoryl)(pyridin-3-yl)methanol (ß-Py), and (diphenylphosphoryl)(pyridin-4-yl)methanol (γ-Py) adsorbed onto colloidal and roughened in oxidation-reduction cycles silver surfaces. The molecular geometries in the equilibrium state and vibrational frequencies were calculated by density functional theory (DFT) at the B3LYP 6-311G(df,p) level of theory. The results imply that the most stable structure of the investigated molecules is a dimer created by two intermolecular hydrogen bonds between the H atom of the α-hydroxyl group (in up (HOU) or down (HOD) stereo bonds position) and the O atom of tertiary phosphine oxide (âO) of the two monomers. Comparison the FT-RS spectra with the respective SERS spectra allowed us to predict the orientation of the hydroxyphosphonate derivatives of pyridine that depends upon both the position of the substituent relative to the ring N atom (in α-, ß-, and γ-position, respectively) and the type of silver substrate.
Asunto(s)
Piridinas/química , Enlace de Hidrógeno , Isomerismo , Nanopartículas del Metal/química , Microscopía Electrónica de Transmisión , Modelos Químicos , Oxidación-Reducción , Compuestos de Plata/química , Espectrometría Raman , VibraciónRESUMEN
Adsorption of decapeptide neuromedin B (NMB) on copper electrode has been investigated by in situ surface-enhanced Raman scattering (SERS) spectroelectrochemistry in the temperature interval from 12 to 72 °C at -0.600 and -1.000 V potentials. It was found that intensities of peptide bands decrease at temperatures above 30 °C with higher decrease slope at -1.000 V. Frequency of F12 mode (1004 cm(-1)) of non-surface-interactive phenylalanine residue was found to be insensitive to temperature variation at both studied electrode potentials, while frequency-temperature curves for surface-interactive groups (Amide-III, methylene) were found to be controlled by the potential. In particular, opposite frequency-temperature trends were detected for Amide-III (Am-III) mode indicating decrease in H-bonding interaction strength of amide C[double bond, length as m-dash]O and N-H groups above 38 °C for -0.600 V, and increase in H-bonding interaction strength between 12 and 72 °C for -1.000 V. Anomalous Am-III temperature-dependence of the frequency at -1.000 V was explained by temperature-induced transformation of a disordered secondary structure to a helix-like conformation. The potential-difference spectrum revealed interaction of methylene groups with Cu surface at sufficiently negative potential values because of the appearance of a soft C-H stretching band near 2825 cm(-1) and a broad band near 2904 cm(-1) assigned to vibration of a distal C-H bond of the surface-confined methylene group. Consequently, a rapid decrease in frequency of CH(2)-stretching band with temperature was observed at -1.000 V, while no essential frequency changes were detected for this mode at -0.600 V. The results show that electrode potential controls the temperature-dependence of the frequency for vibrations associated with surface-interactive molecular groups.
Asunto(s)
Cobre/química , Neuroquinina B/análogos & derivados , Espectrometría Raman , Electrodos , Enlace de Hidrógeno , Neuroquinina B/química , TemperaturaRESUMEN
This paper shows systematic spectroscopic studies using Fourier-transform infrared absorption (FT-IR), Fourier-transform Raman (FT-Raman), and surface-enhanced Raman (SERS) in an aqueous silver sol of fluoro and formyl analogues of phenylboronic acids: 2-fluorophenylboronic acid (2-F-PhB(OH)2), 3-fluorophenylboronic acid (3-F-PhB(OH)2), 4-fluorophenylboronic acid (4-F-PhB(OH)2), 2-formylphenylboronic acid (2-CHO-PhB(OH)2), 3-formylphenylboronic acid (3-CHO-PhB(OH)2), and 4-formylphenylboronic acid (4-CHO-PhB(OH)2). To produce an extensive table of vibrational spectra, density functional theory (DFT) calculations with the B3LYP method at the 6-311++G(d,p) level of theory were performed for the ground state geometry of the most stable species, dimers in cis-trans conformation. On the basis of the SERS spectral profile, the adsorption modes of the phenylboronic acid isomers were proposed. The type of substituent and its position in the phenyl ring have a strong influence on the geometry of isomers on the silver nanoparticle's surface. This effect was especially evident in the case of 4-CH-PhB(OH)2, for which dearomatization of the phenyl ring took place upon adsorption.
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Ácidos Borónicos/química , Adsorción , Espectrofotometría Infrarroja , Espectrometría Raman , Propiedades de SuperficieRESUMEN
This work presents Fourier transform Raman (FT-Raman), Fourier transform absorption infrared (FT-IR), and surface-enhanced Raman scattering (SERS) spectroscopic investigations of three m-nitrophenyl α-guanidinomethylphonic acids, including m-NO2PhG(cHex)P, m-NO2PhG(Morf)P, and m-NO2PhG(An)P, adsorbed onto colloidal and roughened silver surfaces. The SERS spectra were deconvoluted to determine the overlapped bands from which the specific molecular orientation can be deducted. The vibrational wavenumbers are calculated through density functional theory (DFT) at the B3LYP/6-31++G** level with the Gaussian 03, Raint, GaussSum 0.8, and GAR2PED software packages. The experimental and calculated vibrational bands are compared to those from SERS for the investigated compounds adsorbed on colloidal and roughened silver surfaces. The geometry of these molecules on the SERS-active silver surfaces is deduced from the observed changes in both the intensity and width of the Raman bands in the spectra of the bound species relative to the free species.
Asunto(s)
Guanidinas/química , Ácidos Fosforosos/química , Teoría Cuántica , Plata/química , Adsorción , Modelos Moleculares , Estructura Molecular , Propiedades de Superficie , VibraciónRESUMEN
Five analogues of a novel group of boron derivatives of aminophosphonic acids-N-benzylamino-(3-boronphenyl)-S-methylphosphonic acid (m-PhS), N-benzylamino-(4-boronphenyl)-S-methylphosphonic acid (p-PhS), N-benzylamino-(2-boronphenyl)-R-methylphosphonic acid (o-PhR), N-benzylamino-(3-boronphenyl)-R-methylphosphonic acid (m-PhR), and N-benzylamino-(4-boronphenyl)-R-methylphosphonic acid (p-PhR)-were studied using Fourier transform infrared (FT IR), Fourier transform Raman (FT RS), and surface-enhanced Raman (SERS) spectroscopies. Analysis of obtained FT IR and FT RS spectra show that all investigated compounds in the solid state exist as dimeric species formed by an H-bonding interaction between -B(OH)(2) moieties of each monomer. In addition, comparison of the wavenumbers, intensities, and broadness of bands from the FT Raman and SERS spectra allowed information to be obtained regarding the adsorption geometry of the investigated compounds immobilized onto an electrochemically roughened silver substrate.
Asunto(s)
Compuestos de Boro/química , Organofosfonatos/química , Modelos Moleculares , Teoría Cuántica , Espectroscopía Infrarroja por Transformada de Fourier , Espectrometría RamanRESUMEN
This study reports the Raman (FT-Raman) and absorption infrared (FT-IR) spectra, based on calculated wavenumbers and normal modes of vibrations, of the following compounds: L-Leu-D-NH-CH(Me)-PO(3)H(2) (LI), L-Leu-NH-C(Me)(2)-PO(3)H(2) (LII), L-Leu-D-NH-CH(Et)-PO(3)H(2) (LIII), L-Leu-L-NH-CH(Et)-PO(3)H(2) (LIV), L-Leu-L-NH-CH(EtOH)-PO(3)H(2) (LV), L-Leu-NH-C(Me)(Et)-PO(3)H(2) (LVI), L-Leu-L-NH-CH(PrA)-PO(3)H(2) (LVII), L-Leu-L-NH-CH(c-Pr)-PO(3)H(2) (LVIII), L-Leu-L-NH-CH(t-Bu)-PO(3)H(2) (LIX), L-Leu-L-NH-CH(BuA)-PO(3)H(2) (LX), L-Leu-L-NH-CH(c-Bu)-PO(3)H(2) (LXI), and L-Leu-L-NH-C(Adm)-PO(3)H(2) (LXII). The equilibrium geometries and vibrational wavenumbers were calculated using density functional theory (DFT) at the B3LYP, 6-311++G** level using Gaussian 03, Raint, GaussSum 0.8, and Gar2ped software. We briefly compare and analyze the experimental and calculated vibrational wavenumbers in the range 4000-400 cm(-1). In addition, the Raman wavenumbers are compared to those from the surface-enhanced Raman scattering (SERS) spectra for the phosphono analogues of l-leucine (l-Leu) adsorbed on a colloidal silver surface in an aqueous solution. The geometries of these molecules etched on the silver surface were deduced from observed changes in both the intensity and broadness of Raman bands in the spectra of the bound versus free species. For example, LVI appears to adsorb onto the colloidal silver particles mainly through the amine group and amide bond, which assists in the adsorption process, whereas LII shows strongly enhanced SERS bands due to the rocking, twisting, and stretching vibrations of the N(amid)C(sg)(Me)(2)P fragment, suggesting that this peptide's interaction with the silver surface occurs mainly via this fragment. On the other hand, the most dominant SERS bands of LIII and LIV due to the PâO bond stretches reflect PâO···Ag complex formation.
Asunto(s)
Leucina/análogos & derivados , Leucina/química , Organofosfonatos/química , Teoría Cuántica , Espectroscopía Infrarroja por Transformada de Fourier , Espectrometría Raman , VibraciónRESUMEN
Hemoglobin (Hb) is an allosteric tetrameric protein made up of alphabeta heterodimers. The alpha and beta chains are similar, but are chemically and structurally distinct. To investigate dynamical differences between the chains, we have prepared tetramers in which the chains are isotopically distinguishable, via reconstitution with (15)N-heme. Ligand recombination and heme structural evolution, following HbCO dissociation, was monitored with chain selectivity by resonance Raman (RR) spectroscopy. For alpha but not for beta chains, the frequency of the nu(4) porphyrin breathing mode increased on the microsecond time scale. This increase is a manifestation of proximal tension in the Hb T-state, and its time course is parallel to the formation of T contacts, as determined previously by UVRR spectroscopy. Despite the localization of proximal constraint in the alpha chains, geminate recombination was found to be equally probable in the two chains, with yields of 39 +/- 2%. We discuss the possibility that this equivalence is coincidental, in the sense that it arises from the evolutionary pressure for cooperativity, or that it reflects mechanical coupling across the alphabeta interface, evidence for which has emerged from UVRR studies of site mutants.
Asunto(s)
Monóxido de Carbono , Hemoglobinas/química , Subunidades de Proteína/química , Espectrometría Raman/métodos , Humanos , Cinética , Isótopos de Nitrógeno , Porfirinas , Estructura Cuaternaria de Proteína , Globinas alfa/química , Globinas beta/químicaRESUMEN
We used surface-enhanced Raman scattering (SERS) to characterize the adsorption behavior of bombesin (BN) and five BN-related peptides, including phyllolitorin, [Leu(8)]phyllolitorin, neuromedin C (NMC), neuromedin B (NMB), and PG-L (Pseudophryne guntheri), in a silver colloidal solution. Our experiments show that the pyrrole coring of the Trp and aromatic ring of Phe of these peptides are preferentially adsorbed on silver nanoparticles. However, the geometry of the rings and the strength of the interactions with this surface vary among peptides. Additionally, these peptides are weakly coordinated to the colloidal silver surface through the CO fragment of a peptide bond, between Gln/Leu/His and Trp residues, and CNC and SC fragments. Also, using the recently reported SERS spectra of these peptides immobilized onto an electrochemically roughened silver electrode surface, we demonstrate substrate-induced changes in the adsorption behavior of these peptides. Comparative analysis indicates that the interactions between peptides and the enhancing surfaces depend strongly on the geometry of the Trp, CONH, and SC fragments of these biomolecules etched on the surfaces.
Asunto(s)
Bombesina/análogos & derivados , Bombesina/química , Nanopartículas/química , Neuroquinina B/análogos & derivados , Oligopéptidos/química , Fragmentos de Péptidos/química , Ácido Pirrolidona Carboxílico/análogos & derivados , Plata/química , Adsorción , Animales , Anuros , Coloides/química , Electrodos , Neuroquinina B/química , Ácido Pirrolidona Carboxílico/química , Espectrometría Raman/métodos , Propiedades de SuperficieRESUMEN
Here, we report a systematic surface-enhanced Raman spectroscopy (SERS) study of the structures of phosphonate derivatives of the N-heterocyclic aromatic compounds imidazole (ImMeP ([hydroxy(1H-imidazol-5-yl)methyl]phosphonic acid) and (ImMe)(2)P (bis[hydroxy-(1H-imidazol-4-yl)-methyl]phosphinic acid)), thiazole (BAThMeP (butylaminothiazol-2-yl-methyl)phosphonic acid) and BzAThMeP (benzylaminothiazol-2-yl-methyl)phosphonic acid)), and pyridine ((PyMe)(2)P (bis[(hydroxypyridin-3-yl-methyl)]phosphinic acid)) adsorbed on nanometer-sized colloidal particles. We compared these structures to those on a roughened silver electrode surface to determine the relationship between the adsorption strength and the geometry. For example, we showed that all of these biomolecules interact with the colloidal surface through aromatic rings. However, for BzAThMeP, a preferential interaction between the benzene ring and the colloidal silver surface is observed more so than that between the thiazole ring and this substrate. The PC(OH)C fragment does not take part in the adsorption process, and the phosphonate moiety of ImMeP and (ImMe)(2)P, being removed from the surface, only assists in this process.
Asunto(s)
Coloides/química , Hidrocarburos Aromáticos/química , Imidazoles/química , Organofosfonatos/química , Piridinas/química , Plata/química , Espectrofotometría/métodos , Tiazoles/química , Adsorción , Química/métodos , Electrodos , Nanopartículas del Metal/química , Modelos Químicos , Propiedades de SuperficieRESUMEN
The vibrational and reorientational motions of H(2)O ligands and NO(3)(-) anions were investigated by Fourier transform middle-infrared Raman scattering (RS) spectroscopy and phonon density of states, calculated from incoherent inelastic neutron scattering, in the high- and low-temperature phases of [Ca(H(2)O)(4)](NO(3))(2). The theoretical IR and RS spectra were also calculated by means of the quantum chemistry method using density functional theory with PBE1PBE functional at 6-311++G(2d,2p) basis set level. The temperature dependences of the full width at half maximum values of nu(s)(H(2)O) bands in both the infrared absorption and the RS spectroscopy suggest that the observed phase transitions (at T(C1) and T(C2)) are not connected with a drastic change in the speed of H(2)O reorientational motions. However, similar Raman nu(4)(NO(3)(-)) band shape measurements as a function of temperature revealed the existence of a fast NO(3)(-) reorientation in phase I, which is abruptly slowed at the phase transition at T(C1). Activation energy values for the reorientational motions of H(2)O ligands and NO(3)(-) anions were calculated.
RESUMEN
FT-IR and FT-RS spectra of three phosphonate tripeptides containing P-terminal L-Met-L-Ala [L-Gly-L-Met-L-Ala-PO3H2 (GMA), L-Leu-L-Met-L-Ala-PO3H2 ( LMA), and L-Phe-L-Met-L-Ala-PO3H2 (PMA)] were recorded and analyzed. Vibrational wavenumbers and intensities were calculated by density functional theory (DFT) at the B3LYP/6-311++G** level of theory and compared to these molecules in solid form. On the basis of this comparison, conclusions were drawn about the molecular structures. At the same time, the experimental data served as a test for the computational results. SERS spectra were recorded in a silver colloidal dispersion. Silver colloidal dispersions prepared by simple borohydride reduction of silver nitrate were used as substrates. A comparison is made between the SERS spectra and the spectra of the solid sample. Also, the capability of SERS for spectral fingerprinting of analytes with close structural properties using easily prepared substrates and relatively simple instrumentation is illustrated. By careful analysis, we obtained information on the orientation of these tripeptides and specific-competitive interactions of their functional groups with the silver surface. For example, all molecules are thought to adsorb on a silver surface via a P=O bond and a sulfur atom. In addition, the amide bond of GMA assists in the adsorption process, adopting a tilted orientation on the surface, with the N-H unit being closer to the surface than the C=O moiety. Conversely, the C=O unit of the LMA-CONH- bond lies closer to the silver surface than the N-H moiety. The -CH 3 group and P-O bond of LMA additionally interact with the silver surface, whereas for PMA the L-Phe lies almost flat on the colloidal silver surface.
Asunto(s)
Aminoácidos/química , Oligopéptidos/química , Organofosfonatos/química , Teoría Cuántica , Análisis de Fourier , Unión Proteica , Espectroscopía Infrarroja por Transformada de Fourier , Espectrometría Raman , Azufre/química , Propiedades de SuperficieRESUMEN
Surface-enhanced Raman scattering (SERS) spectra were measured for monolayers of various amino acids: L-methionine (Met), L-cysteine (Cys), L-glycine (Gly), L-leucine (Leu), L-phenylalanine (Phe), and L-proline (Pro) and their homodipeptides (Met-Met, Cys-Cys, Gly-Gly, Leu-Leu, Phe-Phe, and Pro-Pro) deposited onto a colloidal gold surface. Orientation of amino acids and their homodipeptides, as well as specific-competitive interactions of their functional groups with the gold surface, were predicted by detailed spectral analysis of the obtained SERS spectra. The analysis performed allowed us to propose a particular surface geometry for each amino acid and homodipeptide on the gold surface. In addition, we compared the structures of these molecules adsorbed on colloidal gold and silver surfaces.
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Aminoácidos/análisis , Materiales Biocompatibles Revestidos/química , Dipéptidos/química , Oro Coloide/química , Espectrometría Raman/métodos , Aminoácidos/química , Materiales Biocompatibles Revestidos/análisis , Dipéptidos/análisis , Oro Coloide/análisis , Luz , Tamaño de la Partícula , Unión Proteica , Dispersión de Radiación , Propiedades de SuperficieRESUMEN
The 1H and 13C NMR spectra of 2-(hydroxyimino)propanohydroxamic acid (hpha) were measured in DMSO-d6 solution. The set of several monomeric structures along with the cluster of H-bonded hpha with three DMSO molecules were proposed to fit the experimental data. The calculated chemical shifts [B3LYP/6-311++G(d,p)] strongly suggested the formation of the cluster in which all the labile protons were H-bonded to the solvent molecules. The comparison between experimental and calculated Raman spectra of hpha in DMSO also suggested that in these conditions the investigated compound forms the proposed cluster rather than dimers. According to our calculations [B3LYP/6-31+G(d)] this cluster was energetically stabilized (84-106 kJ mol-1) compared to postulated dimeric structures. On the other hand, formation of dimers was proposed to be present for hpha in solid state. The comparison of the vibrational data (IR, RS) with the computed harmonic frequencies of three most probable dimers [B3LYP/6-31+G(d)] suggested that the dimer in which molecules adopted the zEe-keto form and were linked by two symmetric, almost linear H-bonds between the carbonyl oxygen atoms and the hydroxamic O-H protons was the predominant species of hpha in the solid state. Thus, the structures of hpha in solid state and DMSO solution appeared to be different.
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Dimetilsulfóxido/química , Ácidos Hidroxámicos/química , Espectroscopía de Resonancia Magnética , Modelos Moleculares , Estructura Molecular , Soluciones/química , Espectroscopía Infrarroja por Transformada de Fourier , Espectrometría Raman , VibraciónRESUMEN
In this paper, we present spectroscopic studies of neuropeptide Y (NPY) and its native NPY(3-36), NPY(13-36), and NPY(22-36) and mutated acetyl-(Leu(28,31))-NPY(24-36)C-terminal fragments acting on Y2 receptor. Since there is some evidence for the correlation between the SERS patterns and the receptor binding ability, we performed a detailed analysis for these compounds at the metal/water interface using Raman spectroscopy (RS) and surface-enhanced Raman spectroscopy (SERS) methods. Many studies have suggested that interactions of this kind are crucial for a variety of biomedical and biochemical phenomena. The identification of amino acids in these peptide sequences by SERS allowed us to determine which molecular fragments were responsible for the interaction with the silver nanoparticle surface. Our findings demonstrated that in all of the investigated compounds, the NPY(32-36)C-terminal fragment (Thr(32)-Arg(33)-Gln(34)-Arg(35)-Tyr(36)NH2) was involved in the adsorption process onto metal substrate. The results of the present study suggest that the same molecular fragment interacts with the Y2 receptor, what proved the usefulness of the SERS method in the study of these biologically active compounds. The search for analogs acting on Y2 receptor may be important from the viewpoint of possible future clinical applications.
Asunto(s)
Neuropéptido Y/química , Receptores de Neuropéptido Y/efectos de los fármacos , Espectrometría Raman/métodos , Animales , Humanos , Neuropéptido Y/farmacología , Espectrofotometría UltravioletaRESUMEN
Samples were obtained from two world-famous 17th century panel paintings of the Gdansk school of panting: 'Seven Acts of Charity' (1607, in St. Mary's Church in Gdansk, Poland) by Anton Möller and 'Angelic Concert' (1611, in Diocesan Museum in Pelplin, Poland) by Hermann Han. Micro-Raman spectroscopy (MRS), optical microscopy (OM), and X-ray fluorescence (XRF) spectroscopy studies of the samples were performed to characterize the pigments present in the individual painting layers (a rich palette of white, black, blue, red, and yellow pigments) and the pictorial techniques used by the artists.
Asunto(s)
Colorantes/análisis , Pintura/análisis , Pinturas/historia , Colorantes/historia , Historia del Siglo XVII , Microscopía , Pintura/historia , Polonia , Espectrometría por Rayos X , Espectrometría RamanRESUMEN
In this work, we corrected the resonance Raman (RR) results presented earlier for deoxy mesoheme IX-reconstituted hemoglobin (mesoHb) alpha and beta subunits implied that mesohemes in these subunits undergo substantial structural changes upon formation of a hemoglobin tetramer (Biochemistry 29 (1990) 5087). We show that these data were probably due to the improper handling of the deoxy mesoheme subunit preparation. Additionally, we discuss the RR spectra of deoxy, oxy, and CO species of mesoheme IX-reconstituted myoglobin (mesoMb) and alpha and beta deoxy meso hemoglobin subunits, including their analogues with deuterium-substituted mesoheme IX in all methyl groups (d(12)). Based on the obtained data, we propose a complete RR band assignment for all of the investigated molecules. The most pronounced changes are observed for the gamma(7) mode (out-of-plane movement of methane carbon atoms) associated with the interaction of the ethyl groups with the globin. We also show that in mesoheme IX-reconstituted proteins, the O(2) molecule binds stronger than in the case of native species. This is manifested by the up-shift of nu(Fe-O(2)).
Asunto(s)
Monóxido de Carbono/metabolismo , Hemoglobinas/química , Hemoglobinas/metabolismo , Mesoporfirinas/química , Mioglobina/química , Mioglobina/metabolismo , Oxígeno/metabolismo , Animales , Caballos , Humanos , Ligandos , Mesoporfirinas/metabolismo , Estructura Molecular , Subunidades de Proteína/química , Subunidades de Proteína/metabolismo , Espectrometría RamanRESUMEN
Potentiometric studies have shown that Ni(II) forms three pH-dependent complexes with famotidine (L), namely: [NiHL](3+), [NiL](2+) and [NiH(-2)L]. Two of them have been isolated from solution with a Ni/famotidine ratio of 1:1. At pH 6.0, a paramagnetic complex [NiL](2+) with octahedral geometry is formed in which, most likely thiazole N(9) and guanidine N(3) nitrogens are involved in the metal binding. Additionally, two water molecules and two perchlorate anions, ClO(4)(-), fulfil the coordination sphere. The second complex, [NiH(-2)L], that precipitates at pH 8 is diamagnetic and takes square-planar geometry in which four nitrogen donors: N(3), N(9), N(16) and N(20) coordinate to Ni(II). Potentiometric studies, mass spectrometry, FT-IR and Raman spectroscopy are employed to determine and discuss the structure of both complexes. Additionally, 1H, 13C and 15N NMR spectroscopy is used to confirm the binding site in a square-planar complex. The assignment of vibrational bands are made using ab initio HF/CEP-31G method.
Asunto(s)
Famotidina/análogos & derivados , Níquel/química , Compuestos Organometálicos/química , Compuestos Organometálicos/síntesis química , Famotidina/síntesis química , Famotidina/química , Concentración de Iones de Hidrógeno , Espectrometría de Masas , Resonancia Magnética Nuclear Biomolecular , Potenciometría , Espectroscopía Infrarroja por Transformada de Fourier , Espectrometría RamanRESUMEN
We present a Raman and surface-enhanced Raman scattering (SERS) study of the following proteins containing S-S group(s): alpha chymotrypsin (alpha-CHT), insulin, lysozyme, oxytocin (OXT), Streptomyces subtilisin inhibitor (SSI), and trypsin inhibitor (STI). The SERS study is performed in order to understand the adsorption mechanism of the above-mentioned proteins on a colloidal silver surface. The SERS spectra presented here show bands associated mainly with aromatic amino acid vibrations. In addition, two distinct vibrations of the -C-S-S-C- fragment are observed in the Raman and SERS spectra, i.e., nu(SS) and nu(CS). The enhancement of the nu(SS) vibration in the SERS spectra yields evidence that the intact disulfide bridge(s) is (are) located near the silver surface. This finding is supported by the presence of the nu(CS) mode(s). The presence of nus(COO-) and nu(C-COO-) in the SERS spectra in the 1384-1399 cm(-1) and 909-939 cm(-1) regions, respectively, indicate that the negatively charged COO- groups (aspartic and glutamic acids) assist in the binding on the positively charged silver surface. The Raman amide I and III bands observed in the 1621-1633 and 1261-1289 cm(-1) ranges, respectively, indicate that the alpha-helical conformation is favored for binding to the surface over the random coil or beta-sheet conformations. In addition, the presence of the imino group of Trp and/or His indicates that these amino acid residues may also bind to the silver sol.
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Coloides/química , Disulfuros/química , Proteínas/química , Plata/química , Espectrometría Raman/métodos , Resonancia por Plasmón de Superficie/métodos , Adsorción , Animales , Sitios de Unión , Bovinos , Pollos , Unión Proteica , Conformación ProteicaRESUMEN
Surface-enhanced Raman scattering spectra (SERS) were measured for various amino acids: L-methionine (Met), L-cysteine (Cys), Lglycine (Gly), L-leucine (Leu), L-phenylalanine (Phe), and L-proline (Pro) and their homodipeptides (Met-Met, Cys-Cys, Gly-Gly, LeuLeu, Phe-Phe, and Pro-Pro) in silver colloidal solutions. The geometry and orientation of the amino acids or dipeptides on the silver surface, and their specific interaction with the surface, were deducted by detailed spectral analysis of the SERS spectra. This analysis has allowed us to propose the particular surface geometry of amino acids or dipeptides and also implied that C-C bonds were almost parallel to the surface, as evidenced by the absence of marker bands in the skeletal C-C stretching region of the spectra. Additionally, using "time-dependent" SERS measurements we solved an existing controversy regarding the binding specificity of Gly-Gly on the silver surface.
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Aminoácidos/análisis , Aminoácidos/química , Coloides/química , Dipéptidos/análisis , Dipéptidos/química , Plata/química , Espectrometría Raman/métodos , Resonancia por Plasmón de Superficie/métodos , Adsorción , Sitios de Unión , Dimerización , Unión Proteica , Conformación Proteica , Reproducibilidad de los Resultados , Sensibilidad y EspecificidadRESUMEN
Surface-enhanced Raman scattering (SERS) spectra of methionine (Met) containing dipeptides: Met-X and X-Met, where X is: L-glycine (Gly), L-leucine (Leu), L-proline (Pro), and L-phenylalanine (Phe) are reported. Using pre-aggregated Ag colloid we obtained high-quality SERS spectra of these compounds spontaneously adsorbed on colloidal silver. Additionally, we measured Raman spectra (RS) of these heterodipeptides in a solid state as well as in acidic and basic solutions. The RS and SERS spectra of Met-X and X-Met presented in this work appear to be different. One of the most prominent and common features in the SERS spectra of all these dipeptides is a band in the 660-690 cm(-1) range that is due to the C-S stretching, v(CS), vibration of Met. This suggests that all the abovementioned compounds adsorb on the silver surface through a thioether atom. On the other hand, the SERS spectra of X-Met show clearly that not only the S atom but also the carboxylate group interact with the colloid surface as manifested by the enhancement of bands in the 920-930 and 1380-1396 cm(-1) regions. These bands are ascribed to the v(C-COO(-)) and v(sym)(COO(-)) vibrations, respectively. Additionally, a SERS spectrum of Phe-Met indicates that the interaction of the thioether atom, amine group, and aromatic side chain with the silver surface is favorable and may dictate the orientation and conformation of adsorbed peptide.