Structure, biomass, and secondary production of benthic macroinvertebrates in subtropical Andean rivers.

Secondary production is the formation of heterotrophic biomass across time, which integrates several important ecological processes that affect the life of organisms, populations, communities and ecosystems, but its study has poor developed in South America. The objectives of this work were to describe the diversity of benthic macroinvertebrate assemblages in terms of abundance and biomass, and to quantify their secondary production for the first time in Andean rivers. A quantitative sampling scheme was implemented, using a Surber sampler, in three forested streams. Physical-chemical variables, nutrients, organic matter and chlorophyll were measured also. The macroinvertebrates were separated and identified mostly at the species level. Each taxon was assigned to a functional feeding group. Secondary production was estimated for 38 taxa, mostly Diptera, Trichoptera, Coleoptera, and Ephemeroptera. The annual production varied from 3769 to 13916 mg dry mass m-2 y-1. Most abundant taxa were also those with higher production, dominated by Ephemeroptera (Baetidae), Trichoptera (Hydropsychidae) and Diptera (Chironomidae and Simuliidae). Density, biomass, and production of collectors and predators were much higher than the other feeding groups. We expect that our results will be useful to evaluate the effects on stream functioning produced by global warming and other anthropogenic disturbances in our region.

Trophic analysis of three species of Marilia (Trichoptera: Odontoceridae) from the neotropics.

The trophic ecology of the aquatic insect fauna has been widely studied for the Northern temperate zone. However, the taxa originally classified within a given particular trophic group in temperate ecosystems, do not necessarily exhibit the same dietary profile beyond its geographic limits. Since, the trophic ecology of caddisfly larvae is largely incomplete in the Neotropical Region, the present work aims to describe feeding habits inferred from quantitative analysis of data taxonomically resolved at the species level. For this, the feeding habits of three Trichoptera species Marilia cinerea, M. elongata and M. flexuosa were recorded in the Yungas forests of Argentina and Bolivia. A total of 15 larvae of each species were sampled from 13 different streams were selected for gut content analysis. The ingested material was extracted from the foregut and midgut by using ventral dissection of thorax. For each species, mandibles were dissected, mounted in glycerin and illustrated in order to highlight morphological differences between these mouth pieces purportedly associated to the dietary behavior of individuals, and their habitats. The niche overlap was estimated through Schoener's method. The diet analysis revealed that M. cinerea, M. elongata and M. flexuosa feed on the same food items, but through different patterns of preferences. Larvae of M. cinerea were collected on both emerging surfaces of rocks on which a thin layer of running water flows and streams sliding areas with stony bottoms attached to the rock surfaces. They displayed a gut content consisting predominantly of invertebrate vestiges and have strong mouthparts provided of large molar areas; this allowed us to allocate the species within the functional group of predators. M. elongata feeds mainly on fine particulate material, its mouthparts are scoop-shaped and occurs in areas of low flow; this set of features is linked to a collector-gatherer strategy. Finally, larvae of M. flexuosa have been primarily assigned to the functional group of shredders and secondarily to the collector-gatherer class. They inhabit sandy bottoms of mountain streams, have strong scoop-shaped mouthparts and show a diet dominated by leaf litter and fine particulate material. We concluded that the functional group assignment to the genus level for Marilia is not recommended, and further studies at species level are necessary.

Insights on the evolution of Coronavirinae in general, and SARS-CoV-2 in particular, through innovative biocomputational resources.

The structural proteins of coronaviruses portray critical information to address issues of classification, assembly constraints, and evolutionary pathways involving host shifts. We compiled 173 complete protein sequences from isolates belonging to the four genera of the subfamily Coronavirinae. We calculate a single matrix of viral distance as a linear combination of protein distances. The minimum spanning tree (MST) connecting the individuals captures the structure of their similarities. The MST re-capitulates the known phylogeny of Coronovirinae. Hosts were mapped onto the MST and we found a non-trivial concordance between host phylogeny and viral proteomic distance. We also study the chimerism in our dataset through computational simulations. We found evidence that structural units coming from loosely related hosts hardly give rise to feasible chimeras in nature. This work offers a fresh way to analyze features of SARS-CoV-2 and related viruses.

Variaciones espaciales y ontogenéticas en la dieta de un plecóptero de amplia distribución Claudioperla tigrina (Plecoptera: Gripopterygidae) / Spatial and ontogenetic variations in the diet of a widely distributed stonefly Claudioperla tigrina (Plecoptera: Gripopterygidae)

Resumen: La determinación de los hábitos alimentarios permite la comprensión de muchos procesos ecológicos que se dan en los ecosistemas lóticos. El objetivo de este trabajo es: 1) conocer los hábitos alimentarios de ninfas de Claudioperla tigrina en un amplio gradiente altitudinal y latitudinal en Argentina; 2) asignar el grupo funcional trófico (GFT) de C. tigrina; 3) evaluar diferencias entre dietas de los sitios estudiados. Las ninfas estudiadas fueron recolectadas a lo largo de un amplio rango espacial en el noroeste de Argentina e incluyen diferentes estados del desarrollo (cuatro clases de tamaño). El material ingerido fue extraído de la parte anterior del tubo digestivo mediante disección ventral del tórax. Los perfiles dietarios fueron analizados a través de la estimación de parámetros de la distribución multinomial de Dirichlet. Se efectuaron ANOVA's para cada rubro alimentario en función de los sitios. Se utilizó la técnica Multidimensional Scaling (MDS) para identificar los sitios con perfiles alimentarios promedios similares. Se realizó un análisis de amplitud de nicho trófico para evaluar la diversificación de los recursos consumidos en cada sitio. El aparato bucal no muestra variaciones a lo largo del desarrollo ninfal, excepto una mayor esclerotización con la edad. Poseen palpos mandibulares y maxilares relativamente cortos y mandíbulas y maxilas fuertes, esclerozadas y dentadas. Las ninfas ingirieron más de un ítem alimentario, sugiriendo que se trata de una especie flexible en su alimentación. El ítem dominante en la dieta fue la MOPG, los signos de haber sido masticado indican hábitos trituradores. Se encontraron diferencias entre sitios para los ítems MOPF, invertebrados, algas y sedimento, pero no para MOPG. Se obtuvieron las correlaciones para cada eje del análisis MDS. Con el eje 1 se correlacionaron negativamente los sitios AP, LT, LI, C y M (Selva de Yungas y Pastizal de neblina) asociados a un mayor consumo de MOPF, en el lado positivo del eje se encontró el sitio P (Altos Andes) asociado a los ítems invertebrados y sedimento. Para el eje 2 se relacionaron positivamente IN (Pastizal neblina) y LR (Monte de Sierras y Bolsones) con la presencia de algas. Los resultados del análisis de amplitud de nicho revelaron diferencias en el uso de los recursos secundarios de la dieta en los sitios estudiados que puede deberse a la oferta ambiental en las ecorregiones consideradas. El GFT de C. tigrina es triturador/ recolector en Selva de Yungas y Pastizales de Neblina y triturador/ depredador en Altos Andes. La definición del GFT de C. tigrina y el establecimiento de su rol como procesador primario de materia orgánica representa un paso importante para futuros estudios de redes tróficas y otras metodologías basadas en los grupos funcionales.

Abstract: Dietary information gives insight into several ecological processes acting in lotic ecosystems. This work aimed: 1) to identify the dietary habits of Claudioperla tigrina immature stages along a wide altitudinal as well as latitudinal gradient in North Argentina; 2) to define the functional feeding group (FFG) of C. tigrina; 3) to evaluate differences in diet in the studied sites. Studied nymphs were collected from localities widely scattered in Northwestern Argentina and they fell into different developmental stages (four size classes). The ingested material was extracted from the foregut and midgut by using thorax ventral dissection. Dietary profiles were analyzed through the estimation of parameters associated with a Dirichletmultinomial distribution. ANOVA's were performed for each food item using sites as factor. Multidimensional Scaling was used to identify sites with similar dietary profiles. An analysis of food-niche breadth was also performed to evaluate the degree of dietary diversification for the resources consumed in each site. Mouthparts are similar across the different size classes, excepting the increasing sclerotization recorded with age. Mouthparts retained most of the typical chewing groundplan, showing relatively short labial and maxillar palps, and strong, sclerotized and denticulated mandibles and maxillae. Our results pointed out that the nymphs of C. tigrina always ingest two or more food items (CPOM, FPOM, invertebrates and algae), suggesting thus a flexible diet. The diet changed in relation to body size, while finer particles were consumed in the early stages, larger particles were ingested in final stages. Coarse particulate organic matter was the dominant food item, with signals of shredding during ingestion. Differences between sites for FPOM, invertebrates, algae and sediment were detected, but not for MOPG. Correlations were obtained for the first two axis of the MDS analysis. Sites AP, LT, LI, C and M (Yungas Rainforest and Humid Grassland) were negatively correlated with the axis 1 which was associated with increased consumption of FPOM. On the positive side of the axis the site P (High Andes) is associated with a greater proportion of invertebrates and sediment. The sites IN (Humid Grassland) and LR (Argentine Northwest Monte and Thistle of the Prepuna) were located at the positive domain of axis 2 which is in turn associated with a greater count of algae in the dietary contents. We found significant differences in the quantity of secondary items, and this is likely related with the resources environmental availability. The FFG of Claudioperla tigrina is primarily shredder/collector-gatherer in Yungas Rainforest and Humid Grassland shredder/predator in High Andes. FFG classification of C. tigrina and the definition of their role for organic matter processing is an important step for future studies based on functional groups such as analysis of food webs. Rev. Biol. Trop. 65 (3): 1174-1184. Epub 2017 September 01.

Trophic analysis of three species of Marilia (Trichoptera: Odontoceridae) from the neotropics / Análisis trófico de tres especies de Marilia (Tri-choptera: Odontoceridae) del neotrópico

The trophic ecology of the aquatic insect fauna has been widely studied for the Northern temperate zone. However, the taxa originally classified within a given particular trophic group in temperate ecosystems, do not necessarily exhibit the same dietary profile beyond its geographic limits. Since, the trophic ecology of caddisfly larvae is largely incomplete in the Neotropical Region, the present work aims to describe feeding habits inferred from quantitative analysis of data taxonomically resolved at the species level. For this, the feeding habits of three Trichoptera species Marilia cinerea, M. elongata and M. flexuosa were recorded in the Yungas forests of Argentina and Bolivia. A total of 15 larvae of each species were sampled from 13 different streams were selected for gut content analysis. The ingested material was extracted from the foregut and midgut by using ventral dissection of thorax. For each species, mandibles were dissected, mounted in glycerin and illustrated in order to highlight morphological differences between these mouth pieces purportedly associated to the dietary behavior of individuals, and their habitats. The niche overlap was estimated through Schoener’s method. The diet analysis revealed that M. cinerea, M. elongata and M. flexuosa feed on the same food items, but through different patterns of preferences. Larvae of M. cinerea were collected on both emerging surfaces of rocks on which a thin layer of running water flows and streams sliding areas with stony bottoms attached to the rock surfaces. They displayed a gut content consisting predominantly of invertebrate vestiges and have strong mouthparts provided of large molar areas; this allowed us to allocate the species within the functional group of predators. M. elongata feeds mainly on fine particulate material, its mouthparts are scoop-shaped and occurs in areas of low flow; this set of features is linked to a collector-gatherer strategy. Finally, larvae of M. flexuosa have been primarily assigned to the functional group of shredders and secondarily to the collector-gatherer class. They inhabit sandy bottoms of mountain streams, have strong scoop-shaped mouthparts and show a diet dominated by leaf litter and fine particulate material. We concluded that the functional group assignment to the genus level for Marilia is not recommended, and further studies at species level are necessary. Rev. Biol. Trop.62 (2): 543-550. Epub 2014 June 01.

La ecología trófica de insectos acuáticos ha sido desarrollada en zonas templadas. Sin embargo, la asignación de un taxón a un grupo trófico no representa necesariamente el mismo en otras regiones. En la Región Neotropical, el conocimiento sobre la ecología trófica de larvas de tricópteros es incompleta y la literatura sobre este tema rara vez se ocupa del análisis de los hábitos alimentarios de larvas con datos cuantitativos a nivel de especie. Este trabajo aporta al conocimiento de las características tróficas de la trichopterofauna del Neotrópico. Se describen los hábitos alimentarios de tres especies de Trichoptera registrados en arroyos de Yungas de Argentina y Bolivia: Marilia cinerea, M. elongata y M. flexuosa. Se seleccionaron 15 larvas de cada especie en 13 arroyos de Yungas surandinas para analizar las piezas bucales y el contenido estomacal. El solapamiento de nicho trófico se estimó mediante el índice de Schoener. El análisis de la dieta reveló que las especies difieren en la preferencia de los ítems registrados, hábitat y forma de sus mandíbulas. Las larvas de M. cinerea habitan en superficies de rocas emergentes. Poseen mandíbulas fuertes con grandes zonas molares y consumen principalmente invertebrados. Esta evidencia permite asignarle el grupo funcional depredador. M. elongata consume material fino, sus mandíbulas tienen forma de cuchara y su ubicación en zonas de bajo flujo permite asignarle una estrategia colectora-recolectora. Las larvas de M. flexuosa habitan en fondos arenosos de arroyos de montaña, tienen fuertes piezas bucales en forma de cuchara y una dieta dominada por hojarasca y material fino. Pertenecen al grupo funcional triturador, secundariamente colector-recolector. Sugerimos que la asignación de grupo funcional a nivel de género no es recomendable para Marilia. Se recomiendan mayores estudios a nivel de especie.