Nitrogen flow in livestock waste system towards an efficient circular economy in agriculture.

The race is on to achieve an important level of efficiency in the attainment of a circular economy in agriculture especially with the aim of sustainable nitrogen management. This cycle in the agricultural sector cuts across livestock farming, agriculture-induced waste generation, recycling and utilization, energy generation, crop production, ecosystem protection and environmental management through the mitigation of climate changes. In this work, we assess the process and functionalities of livestock waste generated from the piggery farm and their combinations with other by-products such as biochar and ash in comparison with mineral fertilization as sources of nitrogen applied in agricultural soil. The experiment was performed in a controlled environment with wheat (Triticum aestivum L.) grown in a neutral and an acidic soil. Pig manure was used as the primary feedstock, fed and processed to biogas and nutrient-rich digestate by the anaerobic digestion process. The results revealed that the co-amendments of pig manure digestate with biochar and ash had complimentary positive effect on measured indices such as mobile potassium, phosphorus, biomass yield and nitrogen use efficiency. The mineral nitrogen fertilizer significantly induced carbon dioxide emissions from day 35 when compared to emissions from the organic amendments. In contrast, the organic amendments influenced nitrous oxide emissions from the onset till day 30 before flattening out. The individual combination of pig manure digestate with biochar and ash had a negative influence on enzymatic activity (dehydrogenase). Soil microbial biomass carbon was induced across all treatments in both soil types. Pig manure digestate + ash and pig manure digestate had 32.1 and 48.8% soil microbial biomass increase in neutral soil and acidic soil, respectively. Overall, the processing and application of single-use amendment or in combination with biochar and ash holds huge potential in the optimization of nitrogen and carbon efficiency towards sustainable soil management via improving soil quality, carbon sequestration and climate change.

Population Structure of Fusarium graminearum Isolated from Different Sources in One Area over the Course of Three Years.

Fusarium head blight (FHB) is an important crop disease worldwide and is mainly caused by members of the Fusarium graminearum species complex. F. graminearum sensu stricto is the most common cosmopolitan and predominant FHB causal agent in Europe. Thus far, the majority of studies have focused on the primary hosts (wheat and barley) of this pathogen, while the relationships between other sources of infection remain unclear. We monitored and sampled test fields over the course of 3 years and acquired 804 F. graminearum isolates from different sources: primary hosts and other plant species included in the crop rotations, weeds from the test fields, decaying plant residue, soil samples, and crop seed. Of these isolates, 73.3% had the 15-acetyldeoxynivalenol genotype and 26.7% had the 3-acetyldeoxynivalenol genotype. F. graminearum isolation rates from weeds (>50%) were much higher than from soil (< 10%) or decaying plant matter (4%). Variable number of tandem repeat markers were used for population analysis. Noticeable genetic differentiation was detected between isolates from living plants and soil biome. In contrast, absence of any noticeable division between primary and alternative plant host communities indicates the importance of weeds and other segetal plants for FHB control and prevention.

The Role of Soil Microbial Consortia in Sustainable Cereal Crop Residue Management.

The global escalation in cereal production, essential to meet growing population demands, simultaneously augments the generation of cereal crop residues, estimated annually at approximately 3107 × 106 Mg/year. Among different crop residue management approaches, returning them to the soil can be essential for various ecological benefits, including nutrient recycling and soil carbon sequestration. However, the recalcitrant characteristics of cereal crop residues pose significant challenges in their management, particularly in the decomposition rate. Therefore, in this review, we aim to summarize the influence of different agricultural practices on enhancing soil microbial decomposer communities, thereby effectively managing cereal crop residues. Moreover, this manuscript provides indirect estimates of cereal crop residue production in Northern Europe and Lithuania, and highlights the diverse roles of lignocellulolytic microorganisms in the decomposition process, with a particular focus on enzymatic activities. This review bridges the knowledge gap and indicates future research directions concerning the influence of agricultural practices on cereal crop residue-associated microbial consortia.

Exploring Endophytic Bacteria from Artemisia spp. and Beneficial Traits on Pea Plants.

Endophytic microorganisms represent promising solutions to environmental challenges inherent in conventional agricultural practices. This study concentrates on the identification of endophytic bacteria isolated from the root, stem, and leaf tissues of four Artemisia plant species. Sixty-one strains were isolated and sequenced by 16S rDNA. Sequencing revealed diverse genera among the isolated bacteria from different Artemisia species, including Bacillus, Pseudomonas, Enterobacter, and Lysinibacillus. AR11 and VR24 obtained from the roots of A. absinthium and A. vulgaris demonstrated significant inhibition on Fusarium c.f. oxysporum mycelial growth. In addition, AR11, AR32, and CR25 exhibited significant activity in phosphatase solubilization, nitrogen fixation, and indole production, highlighting their potential to facilitate plant growth. A comparative analysis of Artemisia species showed that root isolates from A. absinthium, A. campestris, and A. vulgaris have beneficial properties for inhibiting pathogen growth and enhancing plant growth. AR11 with 100% similarity to Bacillus thuringiensis, could be considered a promising candidate for further investigation as microbial biofertilizers. This finding highlights their potential as environmentally friendly alternatives to chemical pesticides, thereby contributing to sustainable crop protection practices.

In Vitro Sensitivity Test of Fusarium Species from Weeds and Non-Gramineous Plants to Triazole Fungicides.

Fusarium species are common plant pathogens that cause serious crop losses worldwide. Fusarium spp. colonize not only the main host plants, crops, but also alternative hosts. The effectiveness of fungicide use in disease management ranges from very successful to possibly promoting the growth of the pathogen. Triazole fungicides are widely used to control these pathogens due to their broad-spectrum activity and systemic nature. This paper reviews the sensitivity of 40 Fusarium strains isolated from weeds, non-gramineous plants, and spring wheat to metconazole, prothioconazole, and tebuconazole. The effect of fungicides was determined by the percentage inhibition of F. graminearum, F. culmorum, F. sporotrichioides, and F. avenaceum fungal mycelial growth. The 50% effective concentration (EC50) values of all isolates on metconazole were lower than 2.9 mg L-1, prothioconazole EC50 ranged from 0.12 to 23.6 mg L-1, and tebuconazole ranged from 0.09 to 15.6 mg L-1. At 0.00025-0.025 mg L-1, the fungicides were ineffective, except for the growth of the F. avenaceum species. It was observed that isolates from weeds were more sensitive to low concentrations of fungicide than isolates from crop plants. In general, information is scarce regarding the comparison of fungicide resistance in Fusarium isolates from weed and crop plants, making this study an additional contribution to the existing knowledge base.

Genetic Characterization of Rhizobium spp. Strains in an Organic Field Pea (Pisum sativum L.) Field in Lithuania.

Biological nitrogen fixation in legume plants depends on the diversity of rhizobia present in the soil. Rhizobial strains exhibit specificity towards host plants and vary in their capacity to fix nitrogen. The increasing interest in rhizobia diversity has prompted studies of their phylogenetic relations. Molecular identification of Rhizobium is quite complex, requiring multiple gene markers to be analysed to distinguish strains at the species level or to predict their host plant. In this research, 50 rhizobia isolates were obtained from the root nodules of five different Pisum sativum L. genotypes ("Bagoo", "Respect", "Astronaute", "Lina DS", and "Egle DS"). All genotypes were growing in the same field, where ecological farming practices were applied, and no commercial rhizobia inoculants were used. The influence of rhizobial isolates on pea root nodulation and dry biomass accumulation was determined. 16S rRNA gene, two housekeeping genes recA and atpD, and symbiotic gene nodC were analysed to characterize rhizobia population. The phylogenetic analysis of 16S rRNA gene sequences showed that 46 isolates were linked to Rhizobium leguminosarum; species complex 1 isolate was identified as Rhizobium nepotum, and the remaining 3 isolates belonged to Rahnella spp., Paenarthrobacter spp., and Peribacillus spp. genera. RecA and atpD gene analysis showed that the 46 isolates identified as R. leguminosarum clustered into three genospecies groups (B), (E) and (K). Isolates that had the highest influence on plant dry biomass accumulation clustered into the (B) group. NodC gene phylogenetic analysis clustered 46 R. leguminosarum isolates into 10 groups, and all isolates were assigned to the R. leguminosarum sv. viciae.

Diversity of Mycotoxins Produced by Fusarium Strains Infecting Weeds.

Although Fusarium is mainly known as an agricultural pathogen that affects monocotyledonous plants, it can also infect different species of weeds in the agricultural environment, thereby contributing to the production of mycotoxins in cereals. In this study, we present new developmental data on the diversity of mycotoxins produced by Fusarium graminearum and Fusarium avenaceum strains from weeds under field conditions. Regarding the potential for the strain dependence of mycotoxin production, this study demonstrated that all F. graminearum strains isolated from weeds and spring wheat showed high potential for deoxynivalenol (DON), 3-acetyl-deoxynivalenol (3-ADON), 15-acetyl-deoxynivalenol (15-ADON), and nivalenol (NIV) production in spring wheat under field conditions. It was determined that F. graminearum is a typical producer of B-type trichothecenes. All strains of F. avenaceum isolated from spring wheat and weeds have the potential to produce enniatins and moniliformin in spring wheat. Each type of weed can host different Fusarium species and strains that produce completely different mycotoxins. Therefore, the distribution of mycotoxins in spring wheat grain may depend more on the Fusarium species or strains that infect the weeds than on the pathogen's host plant species. The predominance of specific mycotoxins in cereals depends on the year's weather conditions and the diversity of Fusarium species present in the field.

Soil Fungistasis against Fusarium Graminearum under Different tillage Systems.

The establishment of the harmful pathogen Fusarium graminearum in different agroecosystems may strongly depend on the ability of the soils to suppress its development and survival. This study aimed to evaluate the influence of different soil tillage systems (i.e., conventional tillage, reduced tillage and no-tillage) on soil fungistasis against F. graminearum. Soil samples were collected three times during the plant growing season in 2016 and 2017 from a long-term, 20-year soil tillage experiment. The F. graminearum in the soil samples was quantified by real-time qPCR. The soil fungistasis was evaluated by the reduction in the radial growth of F. graminearum in an in vitro assay. The antagonistic activity of the soil bacteria was tested using the dual culture method. The F. graminearum DNA contents in the soils were negatively correlated with soil fungistasis (r = -0.649 *). F. graminearum growth on the unfumigated soil was reduced by 70-87% compared to the chloroform fumigated soil. After the plant vegetation renewal, the soil fungistasis intensity was higher in the conventionally tilled fields than in the no-tillage. However, no significant differences were obtained among the tillage treatments at the mid-plant growth stage and after harvesting. 23 out of 104 bacteria isolated from the soil had a moderate effect, and only 1 had a strong inhibitory effect on the growth of F. graminearum. This bacterium was assigned 100% similarity to the Bacillus amyloliquefaciens Hy7 strain (gene bank no: JN382250) according to the sequence of the 16S ribosome subunit coding gene. The results of our study suggest that the presence of F. graminearum in soil is suppressed by soil fungistasis; however, the role of tillage is influenced by other factors, such as soil biological activity, type and quantity of plant residues and environmental conditions.

Oilseed Rape, Wheat, and Barley Grain Contamination as Affected by Different Glyphosate Usage.

Glyphosate is one of the most widely used herbicides, but is still in the spotlight due to its controversial impact on the environment and human health. The main purpose of this study was to explore the effects of different glyphosate usages on harvested grain/seed contamination. Two field experiments of different glyphosate usage were carried out in Central Lithuania during 2015-2021. The first experiment was a pre-harvest application, with two timings, the first according to the label (14-10 days), and the other applied 4-2 days before harvest (off-label), performed in winter wheat and spring barley in 2015 and 2016. The second experiment consisted of glyphosate applications at label rate (1.44 kg ha-1) and double dose rate (2.88 kg ha-1) at two application timings (pre-emergence of crop and at pre-harvest), conducted in spring wheat and spring oilseed rape in 2019-2021. The results suggest that pre-emergence application at both dose rates did not affect the harvested spring wheat grain or spring oilseed rape seeds-no residues were found. The use of glyphosate at pre-harvest, despite the dosage and application timing, led to glyphosate's, as well as its metabolite, aminomethosphonic acid's, occurrence in grain/seeds, but the amounts did not reach the maximum residue levels according to Regulation (EC) No. 293/2013. The grain storage test showed that glyphosate residues remain in grain/seeds at steady concentrations for longer than one year. A one year study of glyphosate distribution within main and secondary products showed that glyphosate residues were mainly concentrated in wheat bran and oilseed rape meal, while no residues found in cold-pressed oil and wheat white flour, when glyphosate used at pre-harvest at the label rate.

Pathogenicity of Asymptomatically Residing Fusarium Species in Non-Gramineous Plants and Weeds to Spring Wheat under Greenhouse Conditions.

Despite significant efforts in recent decades to combat Fusarium head blight (FHB), this disease remains one of the most important and widely studied diseases of wheat and other cereal plants. To date, studies have focused on small grain cereals as hostplants for these pathogens, but it was recently discovered that asymptomatic non-gramineous plants and weeds can serve as alternative sources of fungi associated with FHB. The aim of this study was to evaluate the pathogenicity of Fusarium avenaceum, F. culmorum, F. graminearum and F. sporotrichioides isolated from non-gramineous plants and weed species to spring wheat under greenhouse conditions. A total of 91 Fusarium isolates, including 45 from weeds and 46 from non-gramineous plants were floret inoculated at mid anthesis. The FHB incidence and severity (%) of inoculated heads and the area under the disease progress curve (AUDPC) were calculated. To determine yield losses, the weight of 1000 grains (TGW) was evaluated. Results of the research showed that FHB severity (%) values in Fusarium spp.-inoculated heads from non-gramineous plants varied from 9.3% to 69.6% and AUDPC values ranged from 161.5% to 1044.6%. TGW was most significantly reduced by the F. culmorum isolates BN26r and BN39fl from Brassica napus and isolates BV15.1l and BV142.1pe from Beta vulgaris (37%, 30%, 28.8% and 31.8% respectively, compared to the water control). In Fusarium-inoculated heads from weeds, FHB severity values ranged from 6.2% to 81.0% and AUDPC values varied from 134.2% to 1206.6%. TGW was most significantly decreased by CBP1401r isolate from Capsella bursa-pastoris (52%). The study results suggest that the pathogenicity of Fusarium species isolated from different hosts to wheat more strongly depends on the Fusarium species and strain than the hostplant. Under greenhouse conditions, F. culmorum strain groups obtained from weeds, non-gramineous plants and Triticum were more pathogenic to wheat than the water control and other Fusarium species.

Effects of Pea (Pisum sativum L.) Cultivars for Mixed Cropping with Oats (Avena sativa L.) on Yield and Competition Indices in an Organic Production System.

The benefits of cereal-legume mixed cropping is a sustainable agricultural practice. However, knowledge of the genotypic differences of semi-leafless pea varieties is not enough to help them compete with cereals. In this study, the effects of Lithuania's newest Pisum sativum cultivars ('Egle DS' and 'Lina DS') and, for comparison, a control cultivar ('Jura DS') established with Avena sativa in mixed cropping system were investigated. Three years of field trials (2018, 2019 and 2020) with four experiments involved three different mixtures of each field pea cultivar with oat. The aboveground biomass of mixed cropped new field pea cultivars was found to be significantly higher: biomass of cultivars 'Egle DS' increased by 17.0% and 'Lina DS' by 7.2% on average compared with the control cultivar 'Jura DS'. For the mixed cropping system, statistically greater total aboveground biomass was observed with plant ratios of 50% pea + 50% oat and 60% pea + 40% oat compared to peas monocultures. Mixed cropped oat was the dominant species in all tested mixture compositions; however, the highest total grain yield of mixed crops was obtained when new pea 'Lina DS' and 'Egle DS' cultivars were included in the mixtures compared with the control cultivar. The new pea cultivar 'Egle DS' had a greater effect on protein content compared to other tested pea cultivars. In the new pea cultivars 'Lina DS' and 'Egle DS', the higher photosynthetic capacity and aboveground biomass of mixed cropped pea with oat showed mixture effects in the mixed cropped system and could increase total yield compared with pea monoculture. Generally, the new pea cultivars displayed a greater Land Equivalent Ratio (LER) value, resulting in the greatest yield among the mixtures on average for all three years and all four experiments. Future research could optimize the effects of pea cultivar mixtures with cereals to further improve the yield of organic mixed cropping systems.

Toxigenicity of F. graminearum Residing on Host Plants Alternative to Wheat as Influenced by Environmental Conditions.

Fusarium graminearum is an important pathogen that causes Fusarium head blight (FHB) in several cereal crops worldwide. The potential of this pathogen to contaminate cereals with trichothecene mycotoxins presents a health risk for both humans and animals. This study aimed to evaluate the potential of different trichothecene genotypes of F. graminearum isolated from an alternative host plant to produce mycotoxins under different spring wheat grain incubation conditions. Fourteen F. graminearum strains were isolated from seven alternative host plants and identified as 3-acetyl-deoxynivalenol (3-ADON) and 15-acetyl-deoxynivalenol (15-ADON) genotypes. These strains were cultivated on spring wheat grains at 25 °C and 29 °C for 5 weeks. The mycotoxins produced were analysed with a high-performance liquid chromatograph (HPLC) coupled to a Thermo Scientific TSQ Quantiva MS/MS detector. The obtained results showed that the F. graminearum strains from alternative host plants could produce nivalenol (NIV), deoxynivalenol (DON), fusarenon-X (FUS-X), 3-ADON, deoxynivalenol-3-ß-d-glucoside (D3G), 15-ADON, and zearalenone (ZEA). F. graminearum strains produced DON and ZEA under both temperatures, with the mean concentrations varying from 363 to 112,379 µg kg-1 and from 1452 to 44,816 µg kg-1, respectively. Our results indicated the possible role of dicotyledonous plants, including weeds, as a reservoir of inoculum sources of F. graminearum-induced Fusarium head blight, associated with the risk of mycotoxin contamination in spring wheat.

The Effectiveness of Digestate Use for Fertilization in an Agricultural Cropping System.

The need to find and maximize the use of alternative sources of nutrients for plants and soil environment have been on the forefront of research in sustainable agriculture. These alternatives have to be affordable, accessible, reproduceable, and efficient to compete with established inorganic fertilizers while at the same time reduce any potential negative impacts on the environment. We aimed to evaluate the effectiveness of digestate fertilization in an agricultural system over a period of three years. The digestate utilized in the study consisted of animal waste-based digestates, namely pig manure digestate, chicken manure digestate, and cow manure digestate, and were compared with synthetic nitrogen fertilizer. Every year, the digestate and the synthetic nitrogen fertilizer were split applied at the rate of 90 and 80 kg N ha-1. The soil chemical composition after three years of fertilization showed a slight decrease, significantly different nitrogen and carbon changes while phosphorus and potassium were significantly higher in the digestate treatments. The third year of digestate application showed higher grain yield than previous years and the yield from the digestate treatments were significantly different from the synthetic nitrogen fertilizer. The nitrogen use efficiency for the three years was in the range of 20-25 percent in the digestate treatments, with a strong correlation between the nitrogen use efficiency and the grain yield. There were varied results in the grain quality and straw quality in the digestate and synthetic nitrogen fertilizer with no clear trend observed. Our results showed a relatively high potential of animal waste digestates over the short to mid-term use with a positive result obtained in comparison to synthetic nitrogen fertilizer under favorable climatic conditions.

Modelling the Effects of Weather Conditions on Cereal Grain Contamination with Deoxynivalenol in the Baltic Sea Region.

Fusarium head blight (FHB) is one of the most serious diseases of small-grain cereals worldwide, resulting in yield reduction and an accumulation of the mycotoxin deoxynivalenol (DON) in grain. Weather conditions are known to have a significant effect on the ability of fusaria to infect cereals and produce toxins. In the past 10 years, severe outbreaks of FHB, and grain DON contamination exceeding the EU health safety limits, have occurred in countries in the Baltic Sea region. In this study, extensive data from field trials in Sweden, Poland and Lithuania were analysed to identify the most crucial weather variables for the ability of Fusarium to produce DON. Models were developed for the prediction of DON contamination levels in harvested grain exceeding 200 µg kg-1 for oats, spring barley and spring wheat in Sweden and winter wheat in Poland, and 1250 µg kg-1 for spring wheat in Lithuania. These models were able to predict high DON levels with an accuracy of 70-81%. Relative humidity (RH) and precipitation (PREC) were identified as the weather factors with the greatest influence on DON accumulation in grain, with high RH and PREC around flowering and later in grain development and ripening correlated with high DON levels. High temperatures during grain development and senescence reduced the risk of DON accumulation. The performance of the models, based only on weather variables, was relatively accurate. In future studies, it might be of interest to determine whether inclusion of variables such as pre-crop, agronomic factors and crop resistance to FHB could further improve the performance of the models.

Real-time PCR for quantification of eleven individual Fusarium species in cereals.

Contamination of cereals with Fusarium species is one of the major sources of mycotoxins in food and feed. Quantification of biomass of Fusarium species is essential to understand the interactions of individual species in disease development. In this study quantitative real-time PCR assays based on the elongation factor 1 alpha (EF1alpha) gene for the 11 Fusarium species F. graminearum, F. culmorum, F. poae, F. langsethiae, F. sporotrichioides, F. equiseti, F. tricinctum, F. avenaceum, F. verticillioides, F. subglutinans and F. proliferatum were developed and tested on 24 wheat and 24 maize field samples. The assays were found to be specific and sensitive. Generally, the results from the quantitative real-time PCR assays corresponded well with mycotoxin data of the field samples.

The prevalence of deoxynivalenol and its derivatives in the spring wheat grain from different agricultural production systems in Lithuania.

Deoxynivalenol (DON) together with two acetylated derivatives, 3-acetyldeoxynivalenol (3-ADON) and 15-acetyldeoxynivalenol (15-ADON) occurs in cereal grains and their products. Co-occurrence of DON and acetylated derivatives in cereal grain is detected worldwide. Until now, DON and its derivatives have been considered equally toxic by health authorities. In this study, we analysed 103 samples of spring wheat grain, originating from the fields of different production systems in Lithuania, for the co-occurrence of type-B trichothecenes (DON, 3-ADON, 15-ADON). The samples were classified according to the production system-organic, sustainable and intensive. Mycotoxin levels in the spring wheat grain samples were determined by the HPLC method with UV detection. The type-B trichothecenes were found to be present at higher concentrations in the grain from the intensive production system. Eighty-one percent of the spring wheat grain samples from the intensive production system were co-contaminated with a combination of DON+3-ADON+15-ADON, 1% with DON+3-ADON. Additionally, DON+15-ADON and DON were found in 5% and 10% of the tested samples, respectively. Two percent of the samples were free from mycotoxins. In the grain samples from the sustainable production system, DON and a combination of DON+3-ADON showed a higher incidence - 47% and 23%, respectively. The samples with a combination of DON+3-ADON+15-ADON accounted for 18%. Completely different results were obtained from the analyses of organic grain samples. A large number of the organic spring wheat grain samples were contaminated with DON+3-ADON (55%) or DON (36%). The combination of DON+3-ADON+15-ADON was not present, while DON+15-ADON was present in 9% of the samples tested. The production systems did not lead to significant differences in mycotoxin levels, although a trend toward higher incidence and higher contamination was observed for the samples from the intensive and sustainable production systems.

Fusarium mycotoxins in Lithuanian cereals from the 2004-2005 harvests.

Fusarium mycotoxins deoxynivalenol (DON), T-2 toxin, and zearalenone (ZEN) contamination in 5 kinds of cereal grain harvested in 2004 and 2005 in different regions of Lithuania was examined for their occurrence frequency and level. In all cereal species DON was the most frequently detected mycotoxin with an incidence rate of 98.0-100% and range in positive samples from traces to 691 microg kg(-1) in 2004 and 62.5-94.0%, range from traces to 1,121 microg kg(-1) in 2005, respectively. All the tested oat samples collected in 2004-2005 were found to be contaminated with the T-2 toxin. In one sample from the year 2004 the level of T-2 toxin (121.5 microg kg(-1)) exceeded the allowable level. In 2004, ZEN contamination was more frequent in spring wheat, barley and oats grain, whereas in 2005 this toxin was identified at higher levels only in barley grain (68.0%). In one barley grain sample from 2004, ZEN content (193.4 microg kg(-1)) exceeded the allowable level. Variation in the relative air-humidity exerted some effect on the incidence of Fusarium spp. fungi and mycotoxin content in wheat grain. The weather conditions at harvesting contributed to an increase in the contents of Fusarium fungi and DON and ZEN mycotoxins produced by them in winter wheat grain. This risk factor increases the threat to human and animal health.

Distribution of trichothecene and zearalenone producing Fusarium species in grain of different cereal species and cultivars grown under organic farming conditions in Lithuania.

Fusarium infection level, DNA quantity of the Fusarium poae, F. sporotrichioides, F. langsethiae, F. culmorum, F. graminearum and F. equiseti as well as deoxynivalenol (DON), zearalenone (ZEN ) and T-2 toxin (T-2) content were investigated in grain from cultivars of different cereal species grown on organic farming sites during 2005-2006. The Fusarium infection level was examined by agar plating of single grains, Fusarium spp. DNA content was determined by real-time PCR and the mycotoxins were analyzed by ELISA. Almost all cereal grain samples grown under organic conditions were infected by Fusarium spp. The grains of winter cereals were less infected with Fusarium compared with those of spring cereals. The presence of F. culmorum, F. equiseti, F. sporotrichioides, F. poae, F. langsethiae in cereal grain depended on the environmental conditions during the experimental years. Higher Fusarium species diversity was found in 2005 when the conditions were more favourable for Fusarium infection in cereal grain, whereas F. poae and F. langsethiae were prevalent in cereal grain in 2006. F. langsethiae, identified in Lithuania for the first time, was more frequent in spring cereals than in winter cereals. Almost all grain samples were found to be contaminated with DON, ZEN, T-2 at low concentrations; however, it is known that the action of toxins at low concentrations is slow, the adverse effects are evidenced only after some time and in different forms, which poses a serious risk to human and animal health.