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1.
J Antimicrob Chemother ; 78(2): 389-396, 2023 02 01.
Artículo en Inglés | MEDLINE | ID: mdl-36433818

RESUMEN

OBJECTIVES: During the acute phase of infection, IV antibiotics are preferred to ensure adequate systemic exposure. To assess whether adequate exposure may also be achieved with oral antibiotics, we investigated exposure to oral antibiotics and PTA during the acute phase of infection and after defervescence. METHODS: We enrolled hospitalized, non-critically ill febrile patients treated with IV antibiotics other than amoxicillin or ciprofloxacin. The study consisted of two visits: when patients had received <24 h IV treatment; and when patients had become afebrile. On both visits, patients received one additional dose of 750 mg amoxicillin, or 500 mg ciprofloxacin, depending on the presumed infection, after which serial blood samples were obtained. The primary endpoint was the ratio of the AUC during the febrile and the afebrile phase. The AUCs were considered to be equivalent when the ratio of the mean AUCs and its 90% CI was contained within the acceptance interval of 80%-125%. The secondary endpoint was PTA. RESULTS: Forty-four patients (15 amoxicillin, 29 ciprofloxacin) completed both study visits. The median time between the two study visits was 65.8 h (range 33.8-427.4). The ratio of the mean AUCs (study visit 1/study visit 2) was 97% (90% CI of 80%-117%) for amoxicillin and 112% (90% CI of 108%-116%) for ciprofloxacin. The PTA for amoxicillin and ciprofloxacin did not differ between the two phases and was adequate to treat common pathogens. CONCLUSIONS: The acute phase of infection in non-critically ill febrile patients does not influence the exposure to, or PTA of, orally administered amoxicillin and ciprofloxacin. This might justify earlier IV-to-oral switching.


Asunto(s)
Antibacterianos , Ciprofloxacina , Humanos , Amoxicilina , Fiebre/tratamiento farmacológico
2.
Trop Anim Health Prod ; 54(6): 365, 2022 Nov 01.
Artículo en Inglés | MEDLINE | ID: mdl-36316504

RESUMEN

In southern Africa, the Nguni cattle breed is classified as an indigenous and transboundary animal genetic resource (AnGR) that manifests unique adaptation abilities across distinct agroecological zones. The genetic integrity of various ecotypes is under potential threat due to both indiscriminate crossbreeding and uncontrolled inbreeding. The aim of this study was to assess the genetic diversity and autozygosity that exist both across countries (ES: eSwatini; SA: South Africa) and within countries (SA), between purebred stud animals (SA-S) and research herds (SA-R). Subsets of 96 ES, 96 SA-S, and 96 SA-R genotyped for 40,930 common SNPs were used to study genome-wide profiles of runs of homozygosity (ROH) and heterozygosity (ROHet) as well as inbreeding levels and population structure. The highest percentage (39.8%) of the 2168 ROH segments was 4-8 Mbp in length, whereas 65% of the 935 ROHet segments fell within the 0.5-1 Mbp length category. Inbreeding coefficients indicated positive but low inbreeding (FROH>1Mbp range: 0.025 for SA-S to 0.029 for SA-R). Principal component (PCA) and population structure analyses illustrated genome-level distinctness of (1) the Nguni from global indicine (Boran) and taurine (Hereford) breeds (K = 3), (2) the SA Nguni populations from the ES Nguni population (K = 4), and (3) different Nguni ecotypes within countries (K = 8). Furthermore, greater admixture was observed for the SA-R population compared to purebred SA-S population (shared ancestry = 0.631 ± 0.353 compared to 0.741 ± 0.123), and fewer genomics-defined ES ecotypes were observed than phenotypically (pre)defined. Overall, the results illustrated that genetic uniqueness within the sampled Nguni cattle resulted from both geographic isolation and exposure to different breeding strategies (and, selection pressures). A further loss of genetic variability should be monitored to prevent the endangerment of unique and beneficial ecotypes.


Asunto(s)
Genoma , Endogamia , Bovinos/genética , Animales , Sudáfrica , Esuatini , Genómica/métodos , Genotipo , Polimorfismo de Nucleótido Simple
3.
Trop Anim Health Prod ; 52(4): 1795-1802, 2020 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-31907723

RESUMEN

In this study, the genetic structure of indigenous Tswana and Swazi goats using the Illumina Goat50K SNP array was investigated. Two South African commercial goat breeds were included to investigate admixture with the indigenous populations in southern Africa. A total of 144 DNA samples including Boer goats (n = 24), Kalahari Red (n = 24), Swazi (n = 48), and Tswana goats (n = 48) were genotyped. Statistical analysis was performed using PLINK version 1.07. Genetic diversity, measured as expected heterozygosity, was estimated at 0.390, 0.398, 0.413, and 0.387 for Boer, Kalahari Red, Tswana, and Swazi goats, respectively. The individual inbreeding coefficient varied from 0.019 ± 0.05 to 0.011 ± 0.06 for the Tswana and Swazi goats, respectively. The Principal component analysis clustered the populations according to geographical origin and breed type. Linkage disequilibrium (LD) for shorter intervals (0-10 kb) ranged from 0.44 to 0.56 and commercial breeds had higher values. Effective population sizes decreased with generations and at the 13th generation ranged between 87 for Boer to 266 for Tswana goats. The Tswana population exhibited the highest level of genetic variation and effective population size, which holds potential for improved production in marginal regions. A national strategy is required to maintain genetic diversity in communal goat production systems through well-structured breeding and conservation programs.


Asunto(s)
Cabras/genética , Polimorfismo de Nucleótido Simple , África Austral , Animales , Botswana , Cruzamiento , Genética de Población , Genotipo , Heterocigoto , Endogamia , Desequilibrio de Ligamiento , Filogeografía , Densidad de Población , Análisis de Componente Principal
4.
Anim Genet ; 50(6): 764-767, 2019 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-31579954

RESUMEN

The genus Agapornis, or lovebirds, are popular pet parrots worldwide. Currently, breeders are dependent on pedigree records as a selection tool as no molecular parentage verification test is available for any of the nine species. The A. roseicollis reference genome was recently assembled. This was followed by the sequencing of the whole genomes of the parents of the reference genome individual at 30× coverage. The parents' reads were mapped against the reference genome to identify SNPs. Over 1.6 million SNPs, shared between the parents, were discovered using the Genome Analysis Toolkit pipeline. SNPs were filtered to a panel of 480 SNPs based on Genome Analysis Toolkit parameters. The panel of 480 SNPs was genotyped in a population of 960 lovebirds across seven species. A panel of 262 SNPs was compiled that included SNPs successfully amplified across all species. The 262-SNP panel was reduced based on the observed heterozygosity (HO ) and minor allele frequency (MAF) values per SNP to include the lowest number of SNPs with the highest exclusion power for parentage verification. Two smaller panels consisting of 195 SNPs with MAF and HO values >0.1 and 40 SNPs with MAF and HO values >0.3, were constructed. The panels were verified using 43 families from different species with known relationships to evaluate the exclusion power of each panel. The 195 SNP panel with an average exclusion probability of 99.9% and MAF and HO values >0.1 was proposed as the routine Agapornis parentage verification panel.


Asunto(s)
Agapornis/genética , Polimorfismo de Nucleótido Simple , Agapornis/clasificación , Animales , Cruzamiento , Plumas , Femenino , Masculino , Linaje , Pigmentación/genética
5.
Med Mycol ; 56(2): 253-256, 2018 Feb 01.
Artículo en Inglés | MEDLINE | ID: mdl-28525576

RESUMEN

Volatile organic compounds (VOCs) in exhaled breath may identify the presence of invasive pulmonary aspergillosis. We aimed to detect VOC profiles emitted by in vitro cultured, clinical Aspergillus isolates using gas chromatography-mass spectrometry (GC-MS). Three clinical Aspergillus isolates and a reference strain were cultured while conidiation was prevented. Headspace samples were analyzed using a standardized method. Breath samples of patients from which the cultures were obtained were checked for the presence of the VOCs found in vitro. Each Aspergillus isolate produced a distinct VOC profile. These profiles could not be confirmed in exhaled breath in vivo.


Asunto(s)
Aspergillus/metabolismo , Pruebas Respiratorias , Cromatografía de Gases y Espectrometría de Masas , Aspergilosis Pulmonar Invasiva/diagnóstico , Compuestos Orgánicos Volátiles/química , Aspergillus/clasificación , Aspergillus/aislamiento & purificación , Humanos , Aspergilosis Pulmonar Invasiva/fisiopatología
6.
Crit Care ; 22(1): 243, 2018 Sep 29.
Artículo en Inglés | MEDLINE | ID: mdl-30268133

RESUMEN

BACKGROUND: Selective decontamination of the digestive tract (SDD) and selective oropharyngeal decontamination (SOD) reduce colonization with antibiotic-resistant Gram-negative bacteria (ARGNB), incidence of nosocomial infections and improve survival in ICU patients. The effect on bacterial gut colonization might be caused by growth suppression by antibiotics during SDD/SOD. We investigated intestinal colonization with ARGNB after discharge from ICU and discontinuation of SDD or SOD. METHODS: We performed a prospective, observational follow-up study in regular hospital wards of three teaching hospitals in the Netherlands in patients discharged from the ICU, who were participating in a cluster randomized trial comparing SDD with SOD. We determined rectal carriage with ARGNB at ICU discharge (time (T) = 0) and 3, 6 and 10 days after discharge. The primary endpoint was time to first colonization with ARGNB that was not present at T = 0. Bacteria that are intrinsically resistant to antibiotics were not included in the primary analysis, but were included in post-hoc analysis. RESULTS: Of 1370 patients screened for inclusion, 996 patients had samples at T = 0 (507 after SDD and 489 after SOD). At ICU discharge, the prevalence of intestinal carriage with any ARGNB was 22/507 (4.3%) after SDD and 87/489 (17.8%) after SOD (p < 0.0001): 426 (SDD) and 409 (SOD) patients had at least one follow-up sample for analysis. The hazard rate for acquiring carriage of ARGNB after discontinuation of SDD, compared to SOD, in the ICU was 0.61 (95% CI 0.40-0.91, p = 0.02), and cumulative risks of acquisition of at least one ARGNB until day 10 were 13% (SDD) and 18% (SOD). At day 10 after ICU discharge, the prevalence of intestinal carriage with ARGNB was 11.3% (26/230 patients) after SDD and 12.5% (28/224 patients) after SOD (p = 0.7). In post-hoc analysis of all ARGNB, including intrinsically resistant bacteria, colonization at ICU discharge was lower after SDD (4.9 vs. 22.3%, p < 0.0001), but acquisition rates after ICU discharge were similar in both groups. CONCLUSIONS: Intestinal carriage at ICU discharge and the acquisition rate of ARGNB after ICU discharge are lower after SDD than after SOD. The prevalence of intestinal carriage with ARGNB at 10 days after ICU discharge was comparable in both groups, suggesting rapid clearance of ARGNB from the gut after ICU discharge. TRIAL REGISTRATION: Netherlands Trial Registry, NTR3311 . Registered on 28 february 2012.


Asunto(s)
Descontaminación/métodos , Bacterias Gramnegativas/efectos de los fármacos , Adulto , Anciano , Antibacterianos/uso terapéutico , Farmacorresistencia Bacteriana/efectos de los fármacos , Femenino , Estudios de Seguimiento , Tracto Gastrointestinal/microbiología , Tracto Gastrointestinal/fisiopatología , Humanos , Unidades de Cuidados Intensivos/organización & administración , Unidades de Cuidados Intensivos/estadística & datos numéricos , Masculino , Persona de Mediana Edad , Países Bajos , Orofaringe/efectos de los fármacos , Orofaringe/microbiología , Estudios Prospectivos
7.
Trop Anim Health Prod ; 50(7): 1479-1484, 2018 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-29594961

RESUMEN

The aim of this study was to benchmark the performance of dairy cows in the low-input smallholder system against their counterparts in the high-input system, in South Africa. Data comprised of cow performance records from the national dairy recording scheme. Performance measures included production (305-day yields of milk, fat, and protein), lactation length, somatic cell count (SCC), and reproductive traits, represented by age at first calving (AFC) and calving interval (CI). Least squares means of each trait were compared between the two systems, and lactation curves for production traits and SCC were plotted for each production system. Mean yields of milk, fat, and protein were significantly (P < 0.05) lower in the smallholder (4097 ± 165, 174 ± 5.1, and 141 ± 4.5 respectively) compared to the high-input system (6921 ± 141, 298 ± 4.7, and 245 ± 4.1 respectively). Mean lactation length was significantly (P < 0.05) shorter for the smallholder (308 ± 15.1) than the high-input system (346 ± 12.8). Log-transformed somatic cell count (SCS) was, however, significantly (P < 0.05) higher in the smallholder (2.41 ± 0.01) relative to the high-input system (2.27 ± 0.01). Cows in high-input herds showed typical lactation curves, in contrast to the flat and low peaking curves obtained for the smallholder system. Cows on smallholder herds had their first calving significantly (P < 0.05) older (30 ± 0.5) than those in the high-input system (27 ± 0.5). There was, however, no significant difference (P < 0.05) in CI between the two systems. These results highlight large room for improvement of dairy cow performance in the smallholder system and could assist in decision-making aimed at improving the productivity of the South African dairy industry.


Asunto(s)
Crianza de Animales Domésticos/métodos , Industria Lechera/métodos , Lactancia/fisiología , Leche , Reproducción , Animales , Bovinos , Recuento de Células , Femenino , Análisis de los Mínimos Cuadrados , Sudáfrica
8.
Opt Express ; 25(10): 11514-11529, 2017 May 15.
Artículo en Inglés | MEDLINE | ID: mdl-28788716

RESUMEN

We propose a spline-based aberration reconstruction method through moment measurements (SABRE-M). The method uses first and second moment information from the focal spots of the SH sensor to reconstruct the wavefront with bivariate simplex B-spline basis functions. The proposed method, since it provides higher order local wavefront estimates with quadratic and cubic basis functions can provide the same accuracy for SH arrays with a reduced number of subapertures and, correspondingly, larger lenses which can be beneficial for application in low light conditions. In numerical experiments the performance of SABRE-M is compared to that of the first moment method SABRE for aberrations of different spatial orders and for different sizes of the SH array. The results show that SABRE-M is superior to SABRE, in particular for the higher order aberrations and that SABRE-M can give equal performance as SABRE on a SH grid of halved sampling.

9.
Arch Orthop Trauma Surg ; 137(6): 771-778, 2017 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-28432457

RESUMEN

BACKGROUND: Resurfacing of the glenohumeral joint for patients with glenohumeral arthritis has gained popularity since the first introduction. We report the mid-term results of the Global C.A.P. uncemented resurfacing shoulder prosthesis (DePuy Synthes). METHODS: From January 2007 to December 2009, 48 humeral cementless resurfacing prostheses in 46 patients were performed. All patients were diagnosed with primary glenohumeral osteoarthritis. Patients were contacted for review; the Constant Score, visual analog pain scale, Dutch Simple Shoulder Test, SF-12 scores and physical examination were assessed both preoperatively and yearly postoperatively. Complications and revision surgery were documented. Radiographs were evaluated for component size, offset, inclination, height, loosening and subluxation. RESULTS: Forty-six patients (12 males) with a mean age of 72 years old (range 59-89) were included. At a mean 6.4-year follow-up (range 5-8), the Constant Score, visual analog pain scale and the Dutch Simple Shoulder Test scores improved significantly (p < 0.05) from baseline. Three patients were lost to follow-up. One patient died and two patients were not able to attend the follow-up appointments, due to other health-related issues. Eleven patients (23%) had a revision operation. CONCLUSIONS: The most important findings of this study of the Global C.A.P. shoulder resurfacing arthroplasty were an increase of range of motion, a reduction of pain complaints, but a concerning high rate of revision after mid-term follow-up. LEVEL OF EVIDENCE: Therapeutic Level IV.


Asunto(s)
Artroplastia/métodos , Osteoartritis/cirugía , Reoperación/métodos , Articulación del Hombro/cirugía , Anciano , Anciano de 80 o más Años , Cementación , Femenino , Estudios de Seguimiento , Humanos , Masculino , Persona de Mediana Edad , Osteoartritis/diagnóstico por imagen , Radiografía , Rango del Movimiento Articular , Articulación del Hombro/diagnóstico por imagen , Articulación del Hombro/fisiopatología , Factores de Tiempo , Resultado del Tratamiento
10.
Trop Anim Health Prod ; 49(6): 1265-1271, 2017 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-28624928

RESUMEN

A total of 153 communal farmers in four agro-ecological regions of Botswana were interviewed using a structured questionnaire. The aims of the survey were to characterise existing communal goat production systems, evaluate the importance of goats to farmers and identify breeding practices and constraints encountered in goat production in Botswana. Data was collected on socio-economic parameters, general and breeding management practices and major constraints limiting goat production in Botswana. All respondents were small-scale communal farmers with 63% respondents practising mixed crop-livestock farming and 37% keeping livestock as their primary activity. The majority (33%) of respondents were older than 60 years. Over 80% of the farmers kept goats for cash required for tuition, school uniforms and household commodities as well as re-stocking of animals. Most farmers (62%) kept indigenous crossed genotypes. Generally, uncontrolled mating was practised with the majority of farmers (41%) using on-farm reared bucks for more than two years of breeding and communal bucks (36%) as an alternative. The major constraints limiting goat productivity in communal areas included uncontrolled breeding, predators, theft and diseases. Issues raised by farmers should be considered in designing and implementing effective breeding programs for goats to improve their overall productivity and contribution to poverty alleviation in these communities.


Asunto(s)
Crianza de Animales Domésticos/métodos , Cruzamiento , Cabras/fisiología , Animales , Botswana , Ambiente
11.
J Clin Microbiol ; 54(3): 569-75, 2016 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-26677251

RESUMEN

Currently, there is no noninvasive test that can reliably diagnose early invasive pulmonary aspergillosis (IA). An electronic nose (eNose) can discriminate various lung diseases through an analysis of exhaled volatile organic compounds. We recently published a proof-of-principle study showing that patients with prolonged chemotherapy-induced neutropenia and IA have a distinct exhaled breath profile (or breathprint) that can be discriminated with an eNose. An eNose is cheap and noninvasive, and it yields results within minutes. We determined whether Aspergillus fumigatus colonization may also be detected with an eNose in cystic fibrosis (CF) patients. Exhaled breath samples of 27 CF patients were analyzed with a Cyranose 320. Culture of sputum samples defined the A. fumigatus colonization status. eNose data were classified using canonical discriminant analysis after principal component reduction. Our primary outcome was cross-validated accuracy, defined as the percentage of correctly classified subjects using the leave-one-out method. The P value was calculated by the generation of 100,000 random alternative classifications. Nine of the 27 subjects were colonized by A. fumigatus. In total, 3 subjects were misclassified, resulting in a cross-validated accuracy of the Cyranose detecting IA of 89% (P = 0.004; sensitivity, 78%; specificity, 94%). Receiver operating characteristic (ROC) curve analysis showed an area under the curve (AUC) of 0.89. The results indicate that A. fumigatus colonization leads to a distinctive breathprint in CF patients. The present proof-of-concept data merit external validation and monitoring studies.


Asunto(s)
Aspergillus fumigatus/aislamiento & purificación , Pruebas Respiratorias/métodos , Fibrosis Quística/complicaciones , Nariz Electrónica , Aspergilosis Pulmonar Invasiva/diagnóstico , Adolescente , Adulto , Diagnóstico Precoz , Femenino , Humanos , Aspergilosis Pulmonar Invasiva/microbiología , Masculino , Persona de Mediana Edad , Curva ROC , Sensibilidad y Especificidad , Adulto Joven
12.
Acta Psychiatr Scand ; 131(5): 321-9, 2015 May.
Artículo en Inglés | MEDLINE | ID: mdl-25495209

RESUMEN

OBJECTIVE: Despite widespread use internationally, there is no convincing evidence that community treatment orders (CTO) (legal regimes making out-patient treatment compulsory), reduce readmission rates or have wider patient benefit. The primary and secondary outcomes of the Oxford Community Treatment Order Evaluation Trial (OCTET) (hospitalisation) showed no benefit. This article will, first, test the effect of community compulsion on wider clinical and social outcomes and on patients' experiences of services and the use of treatment pressure and second, explore differential effects in different groups of patients. METHOD: OCTET is a RCT of CTO effectiveness. Three hundred and thirty-six patients were randomised and data for the 333 eligible patients were collected from interviews and medical records at baseline, 6 and 12 months. RESULTS: There was no significant difference at 12 months between the two arms in any of the reported outcomes, except a small difference in patients' view of the effectiveness of treatment pressure, which is unlikely to be clinically meaningful. Two statistically significant interactions were found in the subgroup analysis: symptoms interacted with age and with education, but no pattern was demonstrated. CONCLUSION: CTOs do not have benefit on any of the tested outcomes, or for any subgroup of patients. Their continued use should be carefully reconsidered.


Asunto(s)
Atención Ambulatoria , Internamiento Obligatorio del Enfermo Mental , Servicios Comunitarios de Salud Mental , Trastornos Mentales , Adulto , Atención Ambulatoria/legislación & jurisprudencia , Atención Ambulatoria/métodos , Atención Ambulatoria/psicología , Internamiento Obligatorio del Enfermo Mental/normas , Internamiento Obligatorio del Enfermo Mental/estadística & datos numéricos , Servicios Comunitarios de Salud Mental/métodos , Servicios Comunitarios de Salud Mental/organización & administración , Femenino , Humanos , Masculino , Trastornos Mentales/diagnóstico , Trastornos Mentales/psicología , Trastornos Mentales/terapia , Pacientes Ambulatorios/psicología , Pacientes Ambulatorios/estadística & datos numéricos , Prioridad del Paciente , Readmisión del Paciente/estadística & datos numéricos , Escalas de Valoración Psiquiátrica , Resultado del Tratamiento
13.
BMC Infect Dis ; 15: 336, 2015 Aug 14.
Artículo en Inglés | MEDLINE | ID: mdl-26271750

RESUMEN

BACKGROUND: Human Rhinovirus (HRV) is responsible for the majority of common colds and is frequently accompanied by secondary bacterial infections through poorly understood mechanisms. We investigated the effects of experimental human HRV serotype 16 infection on the upper respiratory tract microbiota. METHODS: Six healthy volunteers were infected with HRV16. We performed 16S ribosomal RNA-targeted pyrosequencing on throat swabs taken prior, during and after infection. We compared overall community diversity, phylogenetic structure of the ecosystem and relative abundances of the different bacteria between time points. RESULTS: During acute infection strong trends towards increases in the relative abundances of Haemophilus parainfluenzae and Neisseria subflava were observed, as well as a weaker trend towards increases of Staphylococcus aureus. No major differences were observed between day-1 and day 60, whereas differences between subjects were very high. CONCLUSIONS: HRV16 infection is associated with the increase of three genera known to be associated with secondary infections following HRV infections. The observed changes of upper respiratory tract microbiota could help explain why HRV infection predisposes to bacterial otitis media, sinusitis and pneumonia.


Asunto(s)
Infecciones por Picornaviridae/microbiología , Infecciones del Sistema Respiratorio/microbiología , Rhinovirus , Adolescente , Adulto , Femenino , Haemophilus parainfluenzae/aislamiento & purificación , Humanos , Masculino , Microbiota , Persona de Mediana Edad , Neisseria/aislamiento & purificación , Faringe/microbiología , ARN Ribosómico 16S/análisis , Staphylococcus aureus/aislamiento & purificación , Adulto Joven
14.
Euro Surveill ; 20(31)2015 Aug 06.
Artículo en Inglés | MEDLINE | ID: mdl-26290427

RESUMEN

We report two cases of Ross River virus (RRV) infection in Dutch travellers who visited Australia during February to April 2015. These cases coincided with the largest recorded outbreak of RRV disease in Australia since 1996. This report serves to create awareness among physicians to consider travel-related RRV disease in differential diagnosis of patients with fever, arthralgia and/or rash returning from the South Pacific area, and to promote awareness among professionals advising travellers to this region.


Asunto(s)
Infecciones por Alphavirus/diagnóstico , Virus del Río Ross/aislamiento & purificación , Viaje , Artralgia/etiología , Artralgia/virología , Australia , Fatiga/etiología , Fatiga/virología , Femenino , Técnica del Anticuerpo Fluorescente , Humanos , Inmunoglobulina G/sangre , Inmunoglobulina M/sangre , Persona de Mediana Edad , Mialgia/etiología , Mialgia/virología , Países Bajos
15.
S Afr Med J ; 112(7): 478-486, 2022 07 01.
Artículo en Inglés | MEDLINE | ID: mdl-36217858

RESUMEN

BACKGROUND: Human papillomavirus (HPV)-based primary screening guidelines are based on screening test performance and prevalence data generated in high-resource areas with low HIV infection rates. There is an urgent need for local data on infection and disease prevalence, as well as screening test performance, among both HIV-positive and HIV-negative South African (SA) women, in order to inform updated screening guidelines. Objectives. This study describes the baseline characteristics of participants in the cross-sectional phase of the multicentric DIAgnosis in Vaccine And Cervical Cancer Screen (DiaVACCS) screening trial. The objective was to determine the prevalence of positive screening and pre-invasive disease using different tests and strategies in the SA HIV-positive and HIV-negative population. METHODS: A total of 1  104 women aged 25 - 65 years and eligible for screening were included, 465 HIV positive and 639 HIV negative. Visual inspection and molecular and cytological screening tests were done on self-sampled and healthcare worker-collected specimens. All participants who screened positive and 49.1% of those who screened negative were invited for colposcopy and biopsy, and those qualifying for treatment were recalled for large loop excision of the transformation zone as part of the trial. The worst histology result for each participant was used, and for untested women, multiple imputation was used to estimate verification biasadjusted histology values. RESULTS: Visual inspection was positive in 50.4% of HIV-positive v. 20.9% of HIV-negative women, cytology (atypical squamous cells of undetermined significance) in 39.9% v. 17.0%, and high-risk HPV DNA in 41.2% v. 19.6%. Overall, high-grade squamous intraepithelial lesion-positive cytology peaked in the age group 30 - 39 years at 16.7%. After adjustment for verification bias, histological diagnosis of cervical intraepithelial neoplasia (CIN)2+ was suspected in 44.7% v. 23.5% and CIN3+ in 23.3% v. 10.2% of HIV-positive and negative women, respectively. Invasive cancer was diagnosed in 15 women (1.95% of histological studies performed), and verification bias adjustment suggested 20 cases (1.8% of the study population). CONCLUSION: The baseline findings from the DiaVACCS trial confirm a high prevalence of HPV-related cervical pathology in the SA HIV-negative screening population, showing a clear need to reach these women with a screening programme. Among HIV-positive women, prevalence values were almost doubled. The prevalence of existing invasive cervical cancer was 1 - 2% of all women. Further analysis of the performance of single and multiple screening tests between the two subgroups will contribute to the choice of the most effective strategies to identify women at risk of developing invasive cancer.


Asunto(s)
Infecciones por VIH , Infecciones por Papillomavirus , Neoplasias del Cuello Uterino , Vacunas , Estudios Transversales , Demografía , Detección Precoz del Cáncer/métodos , Femenino , Infecciones por VIH/diagnóstico , Infecciones por VIH/epidemiología , Humanos , Tamizaje Masivo/métodos , Papillomaviridae/genética , Infecciones por Papillomavirus/complicaciones , Infecciones por Papillomavirus/diagnóstico , Infecciones por Papillomavirus/epidemiología , Sudáfrica/epidemiología , Neoplasias del Cuello Uterino/diagnóstico , Neoplasias del Cuello Uterino/epidemiología , Neoplasias del Cuello Uterino/patología , Frotis Vaginal
17.
Epidemiol Infect ; 139(9): 1361-8, 2011 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-20974019

RESUMEN

The annual number of episodes of clinical gastroenteritis caused by Campylobacter spp. in The Netherlands is estimated to be 75 000, i.e. once per 200 person life-years. This number is based on extrapolation of culture results from population-based studies. The number of culture-confirmed cases of Campylobacter infection peaks in the first 3 years of life and again between the ages of 20 and 25 years. The seroepidemiology of Campylobacter describes the relationship between age and exposure to Campylobacter and reflects both symptomatic and asymptomatic infections. Using a validated ELISA system, antibodies to Campylobacter were measured in an age-stratified sample (n=456) of the PIENTER serum collection of the Dutch general population. The seroprevalence of Campylobacter IgG antibodies increased with age, reaching almost 100% at age 20 years. Antibody levels steadily increased with age until young adulthood, suggesting repeated exposure to Campylobacter. In conclusion, seroepidemiological data demonstrated repeated exposures to Campylobacter throughout life, most of which do not lead to clinical symptoms. From young adulthood, >95% of the population in The Netherlands had serological evidence for exposure to Campylobacter.


Asunto(s)
Anticuerpos Antibacterianos/sangre , Infecciones por Campylobacter/epidemiología , Infecciones por Campylobacter/inmunología , Gastroenteritis/inmunología , Inmunoglobulina G/inmunología , Adolescente , Adulto , Anciano , Anciano de 80 o más Años , Infecciones por Campylobacter/sangre , Niño , Preescolar , Ensayo de Inmunoadsorción Enzimática , Femenino , Gastroenteritis/sangre , Gastroenteritis/microbiología , Humanos , Lactante , Masculino , Persona de Mediana Edad , Estudios Seroepidemiológicos
18.
Thromb Res ; 199: 143-148, 2021 03.
Artículo en Inglés | MEDLINE | ID: mdl-33535120

RESUMEN

INTRODUCTION: In the first wave, thrombotic complications were common in COVID-19 patients. It is unknown whether state-of-the-art treatment has resulted in less thrombotic complications in the second wave. METHODS: We assessed the incidence of thrombotic complications and overall mortality in COVID-19 patients admitted to eight Dutch hospitals between September 1st and November 30th 2020. Follow-up ended at discharge, transfer to another hospital, when they died, or on November 30th 2020, whichever came first. Cumulative incidences were estimated, adjusted for competing risk of death. These were compared to those observed in 579 patients admitted in the first wave, between February 24th and April 26th 2020, by means of Cox regression techniques adjusted for age, sex and weight. RESULTS: In total 947 patients with COVID-19 were included in this analysis, of whom 358 patients were admitted to the ICU; 144 patients died (15%). The adjusted cumulative incidence of all thrombotic complications after 10, 20 and 30 days was 12% (95% confidence interval (CI) 9.8-15%), 16% (13-19%) and 21% (17-25%), respectively. Patient characteristics between the first and second wave were comparable. The adjusted hazard ratio (HR) for overall mortality in the second wave versus the first wave was 0.53 (95%CI 0.41-0.70). The adjusted HR for any thrombotic complication in the second versus the first wave was 0.89 (95%CI 0.65-1.2). CONCLUSIONS: Mortality was reduced by 47% in the second wave, but the thrombotic complication rate remained high, and comparable to the first wave. Careful attention to provision of adequate thromboprophylaxis is invariably warranted.


Asunto(s)
COVID-19/complicaciones , Embolia Pulmonar/etiología , Trombosis/etiología , Tromboembolia Venosa/etiología , Anciano , Anciano de 80 o más Años , COVID-19/mortalidad , Estudios de Cohortes , Enfermedad Crítica/mortalidad , Femenino , Hospitalización , Humanos , Incidencia , Masculino , Persona de Mediana Edad , Países Bajos/epidemiología , Modelos de Riesgos Proporcionales , SARS-CoV-2/aislamiento & purificación
19.
Neth J Med ; 78(6): 341-348, 2020 12.
Artículo en Inglés | MEDLINE | ID: mdl-33380531

RESUMEN

BACKGROUND: Blood cultures are essential diagnostic tools to identify pathogens in systemic infections. However, logistics of blood culture performance is often suboptimal. This study analyses the pre-analytic phase of blood culture processing through different types of risk assessments. METHODS: We performed direct observations to gain in-depth knowledge of the root causes of suboptimal blood culture performance. These findings were summarised in a Bow-Tie chart. We then utilised a healthcare failure mode and effect analysis to prioritise failures per step in the process and to organise improvement activities. Finally, improvement actions were planned. RESULTS: Not obtaining a second set of blood cultures in the logistics of blood culture performance had the highest priority for action. Several failure modes, including human and system factors, were identified. Improvement actions included training and clinical lessons for nurses in the emergency department, updating hospital search engines to ease identification of relevant protocols, and an evaluation of the workload at the emergency department. Failure modes caused by human factors appear easy to address, however changing human behaviour is challenging. CONCLUSIONS: The analysis provided useful insight into the different steps in the logistics of blood culture performance and facilitated the organisation of actions focused on addressing the most urgent root causes.


Asunto(s)
Cultivo de Sangre , Análisis de Modo y Efecto de Fallas en la Atención de la Salud , Servicio de Urgencia en Hospital , Hospitales , Humanos , Medición de Riesgo
20.
Eur J Clin Microbiol Infect Dis ; 28(8): 921-8, 2009 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-19333631

RESUMEN

The identification of markers for virulent group B streptococci (GBS) could guide prenatal prevention and intervention strategies. We compared the distribution of serotypes and potential pathogenicity islands (PPIs) between invasive and colonizing GBS. Colonizing and invasive strains from The Netherlands and Taiwan were serotyped. We used polymerase chain reaction (PCR) for the amplification of several new PPI markers. Several combinations of PPI-specific markers and serotypes were associated with invasiveness. For Dutch neonatal strains, a receiver operating characteristic (ROC) curve with serotype and five PPI markers showed an area under the curve (AUC) of 0.963 (95% confidence interval [CI] 0.935-0.99). For Taiwanese neonatal strains, serotype and four different PPI markers resulted in an ROC curve with an AUC of 0.894 (95% CI 0.826-0.963). PPI-specific and serological markers can distinguish local neonatal invasive GBS strains from colonizing ones. Apparently, there are clear regional differences in the GBS epidemiology and infection potential of clones.


Asunto(s)
Portador Sano/epidemiología , Portador Sano/microbiología , Complicaciones Infecciosas del Embarazo/epidemiología , Complicaciones Infecciosas del Embarazo/microbiología , Infecciones Estreptocócicas/epidemiología , Streptococcus agalactiae/clasificación , Streptococcus agalactiae/patogenicidad , Adulto , Anciano , Femenino , Islas Genómicas , Genotipo , Humanos , Recién Nacido , Países Bajos , Reacción en Cadena de la Polimerasa/métodos , Embarazo , Sensibilidad y Especificidad , Serotipificación , Streptococcus agalactiae/genética , Streptococcus agalactiae/inmunología , Taiwán , Factores de Virulencia/genética
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